Protein–RNA interactions for Protein: A0A0K0K1G6

TRBV10-3, T-cell receptor beta variable 10-3 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV10-3A0A0K0K1G6 MAPK1-202ENST00000398822 1487 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
TRBV10-3A0A0K0K1G6 RCC1L-202ENST00000614461 2419 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
TRBV10-3A0A0K0K1G6 TESK1-206ENST00000620767 2438 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.38
TRBV10-3A0A0K0K1G6 AGTRAP-204ENST00000376637 1067 ntTSL 2 BASIC17.45■□□□□ 0.38
TRBV10-3A0A0K0K1G6 PURG-201ENST00000339382 2693 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
TRBV10-3A0A0K0K1G6 EXOC3L4-201ENST00000380069 2293 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
TRBV10-3A0A0K0K1G6 LMTK3-202ENST00000600059 5113 ntAPPRIS ALT2 TSL 2 BASIC17.44■□□□□ 0.38
TRBV10-3A0A0K0K1G6 KCTD17-209ENST00000610767 1502 ntAPPRIS ALT2 TSL 3 BASIC17.44■□□□□ 0.38
TRBV10-3A0A0K0K1G6 BIN1-204ENST00000348750 2074 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
TRBV10-3A0A0K0K1G6 TRNP1-201ENST00000522111 1958 ntAPPRIS P2 TSL 1 (best) BASIC17.44■□□□□ 0.38
TRBV10-3A0A0K0K1G6 GNPTAB-201ENST00000299314 5701 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
TRBV10-3A0A0K0K1G6 DCBLD1-201ENST00000296955 1979 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
TRBV10-3A0A0K0K1G6 SHF-206ENST00000560471 2499 ntTSL 5 BASIC17.42■□□□□ 0.38
TRBV10-3A0A0K0K1G6 ABHD12-201ENST00000339157 2117 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
TRBV10-3A0A0K0K1G6 RASSF7-201ENST00000397582 1731 ntAPPRIS ALT2 TSL 2 BASIC17.41■□□□□ 0.38
TRBV10-3A0A0K0K1G6 AC008738.5-201ENST00000587312 482 ntTSL 3 BASIC17.4■□□□□ 0.38
TRBV10-3A0A0K0K1G6 CGREF1-203ENST00000402394 1906 ntAPPRIS P2 TSL 2 BASIC17.4■□□□□ 0.38
TRBV10-3A0A0K0K1G6 CADPS-215ENST00000490353 2669 ntTSL 5 BASIC17.4■□□□□ 0.38
TRBV10-3A0A0K0K1G6 CPNE1-203ENST00000397442 1695 ntTSL 5 BASIC17.39■□□□□ 0.37
TRBV10-3A0A0K0K1G6 FAM220A-201ENST00000313324 2214 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
TRBV10-3A0A0K0K1G6 TPRA1-202ENST00000355552 1933 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
TRBV10-3A0A0K0K1G6 PHOX2A-201ENST00000298231 1699 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
TRBV10-3A0A0K0K1G6 COL13A1-210ENST00000517713 2007 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
TRBV10-3A0A0K0K1G6 SPIRE1-203ENST00000410092 5533 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
TRBV10-3A0A0K0K1G6 FAM117A-201ENST00000240364 2365 ntAPPRIS P2 TSL 1 (best) BASIC17.37■□□□□ 0.37
TRBV10-3A0A0K0K1G6 GIPC1-203ENST00000393033 1926 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
TRBV10-3A0A0K0K1G6 TMEM158-201ENST00000503771 1813 ntAPPRIS P1 BASIC17.35■□□□□ 0.37
TRBV10-3A0A0K0K1G6 FTCD-202ENST00000397743 1834 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
TRBV10-3A0A0K0K1G6 MAGI2-215ENST00000628980 6212 ntTSL 5 BASIC17.34■□□□□ 0.37
TRBV10-3A0A0K0K1G6 GXYLT1-201ENST00000280876 1937 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
TRBV10-3A0A0K0K1G6 HNRNPAB-207ENST00000514633 1571 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
TRBV10-3A0A0K0K1G6 MVK-208ENST00000539696 608 ntTSL 5 BASIC17.33■□□□□ 0.36
TRBV10-3A0A0K0K1G6 KCTD17-202ENST00000403888 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
TRBV10-3A0A0K0K1G6 FBXO2-201ENST00000354287 1560 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
TRBV10-3A0A0K0K1G6 FZD2-201ENST00000315323 2112 ntAPPRIS P1 BASIC17.32■□□□□ 0.36
TRBV10-3A0A0K0K1G6 TPRA1-209ENST00000489960 1903 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
TRBV10-3A0A0K0K1G6 SIRT3-201ENST00000382743 2543 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
TRBV10-3A0A0K0K1G6 MAPK4-202ENST00000540640 1576 ntTSL 2 BASIC17.31■□□□□ 0.36
TRBV10-3A0A0K0K1G6 MBOAT7-203ENST00000391754 1797 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
TRBV10-3A0A0K0K1G6 CUL4A-202ENST00000375440 2364 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
TRBV10-3A0A0K0K1G6 ARPC5L-202ENST00000353214 2507 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
TRBV10-3A0A0K0K1G6 CTDNEP1-201ENST00000318988 1549 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
TRBV10-3A0A0K0K1G6 ZIC2-201ENST00000376335 2983 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
TRBV10-3A0A0K0K1G6 ZNF513-201ENST00000323703 2139 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
TRBV10-3A0A0K0K1G6 DPY19L1-209ENST00000638088 5075 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
TRBV10-3A0A0K0K1G6 VWA1-201ENST00000338660 2147 ntTSL 2 BASIC17.28■□□□□ 0.36
TRBV10-3A0A0K0K1G6 HMX1-201ENST00000400677 1895 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
TRBV10-3A0A0K0K1G6 SYNGR1-202ENST00000318801 1361 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
TRBV10-3A0A0K0K1G6 AMN-201ENST00000299155 1907 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.36
TRBV10-3A0A0K0K1G6 GIPC1-201ENST00000345425 1782 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
TRBV10-3A0A0K0K1G6 PI4KAP1-202ENST00000611748 1906 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
TRBV10-3A0A0K0K1G6 MSANTD3-203ENST00000395067 1362 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
TRBV10-3A0A0K0K1G6 EMC10-202ENST00000376918 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
TRBV10-3A0A0K0K1G6 SH3GL3-202ENST00000427482 1806 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
TRBV10-3A0A0K0K1G6 PQLC1-203ENST00000397778 2555 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
TRBV10-3A0A0K0K1G6 COPS6-201ENST00000303904 1432 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
TRBV10-3A0A0K0K1G6 LINC01578-203ENST00000554669 578 ntTSL 5 BASIC17.25■□□□□ 0.35
TRBV10-3A0A0K0K1G6 SECTM1-201ENST00000269389 2235 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
TRBV10-3A0A0K0K1G6 SOX1-201ENST00000330949 2842 ntAPPRIS P1 BASIC17.24■□□□□ 0.35
TRBV10-3A0A0K0K1G6 MLST8-203ENST00000397124 1691 ntAPPRIS P3 TSL 5 BASIC17.23■□□□□ 0.35
TRBV10-3A0A0K0K1G6 TSPAN33-201ENST00000486685 1863 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
TRBV10-3A0A0K0K1G6 WDSUB1-205ENST00000409990 1920 ntAPPRIS P1 TSL 2 BASIC17.22■□□□□ 0.35
TRBV10-3A0A0K0K1G6 RAPGEF1-203ENST00000372195 6256 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
TRBV10-3A0A0K0K1G6 PLPP2-203ENST00000434325 1383 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
TRBV10-3A0A0K0K1G6 AGFG1-205ENST00000409979 2089 ntAPPRIS ALT1 TSL 5 BASIC17.21■□□□□ 0.35
TRBV10-3A0A0K0K1G6 RNF130-201ENST00000261947 1766 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
TRBV10-3A0A0K0K1G6 GRK2-204ENST00000526285 1458 ntTSL 5 BASIC17.21■□□□□ 0.35
TRBV10-3A0A0K0K1G6 LDB1-202ENST00000425280 2089 ntTSL 5 BASIC17.2■□□□□ 0.34
TRBV10-3A0A0K0K1G6 CERS2-205ENST00000368954 2505 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
TRBV10-3A0A0K0K1G6 RTN4R-201ENST00000043402 2157 ntAPPRIS P2 TSL 1 (best) BASIC17.19■□□□□ 0.34
TRBV10-3A0A0K0K1G6 HECA-201ENST00000367658 5614 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
TRBV10-3A0A0K0K1G6 ST7-AS1-201ENST00000456775 1889 ntBASIC17.19■□□□□ 0.34
TRBV10-3A0A0K0K1G6 ZNF219-201ENST00000360947 3071 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
TRBV10-3A0A0K0K1G6 FBXO45-201ENST00000311630 5899 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
TRBV10-3A0A0K0K1G6 CHCHD4-201ENST00000295767 1603 ntTSL 2 BASIC17.18■□□□□ 0.34
TRBV10-3A0A0K0K1G6 CCDC88C-205ENST00000553403 1651 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
TRBV10-3A0A0K0K1G6 HOXB3-210ENST00000489475 1845 ntTSL 2 BASIC17.18■□□□□ 0.34
TRBV10-3A0A0K0K1G6 ARL8A-201ENST00000272217 1793 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
TRBV10-3A0A0K0K1G6 PDPK1-203ENST00000389224 2416 ntTSL 2 BASIC17.17■□□□□ 0.34
TRBV10-3A0A0K0K1G6 ITGA9-203ENST00000422441 2282 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
TRBV10-3A0A0K0K1G6 RTN2-202ENST00000344680 2063 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
TRBV10-3A0A0K0K1G6 CHPT1-205ENST00000549872 2001 ntAPPRIS ALT2 TSL 5 BASIC17.16■□□□□ 0.34
TRBV10-3A0A0K0K1G6 GALK1-205ENST00000588479 1866 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
TRBV10-3A0A0K0K1G6 AC006077.2-201ENST00000623591 457 ntBASIC17.15■□□□□ 0.34
TRBV10-3A0A0K0K1G6 RRNAD1-201ENST00000368216 2254 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
TRBV10-3A0A0K0K1G6 AL360182.2-201ENST00000451656 470 ntTSL 3 BASIC17.14■□□□□ 0.33
TRBV10-3A0A0K0K1G6 FGF2-203ENST00000614010 867 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
TRBV10-3A0A0K0K1G6 PKDCC-201ENST00000294964 2502 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
TRBV10-3A0A0K0K1G6 TMEM266-201ENST00000388942 2520 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
TRBV10-3A0A0K0K1G6 CNIH2-203ENST00000528852 1524 ntAPPRIS ALT1 TSL 1 (best) BASIC17.13■□□□□ 0.33
TRBV10-3A0A0K0K1G6 AC079848.1-201ENST00000511301 327 ntTSL 3 BASIC17.13■□□□□ 0.33
TRBV10-3A0A0K0K1G6 FEV-201ENST00000295727 1879 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
TRBV10-3A0A0K0K1G6 COL13A1-203ENST00000398969 2267 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
TRBV10-3A0A0K0K1G6 SP8-201ENST00000361443 1714 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
TRBV10-3A0A0K0K1G6 SIGMAR1-203ENST00000378892 1743 ntTSL 2 BASIC17.11■□□□□ 0.33
TRBV10-3A0A0K0K1G6 LINC01578-201ENST00000553829 732 ntTSL 2 BASIC17.11■□□□□ 0.33
TRBV10-3A0A0K0K1G6 NRGN-201ENST00000284292 1306 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
TRBV10-3A0A0K0K1G6 FAM89A-201ENST00000366654 1495 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
TRBV10-3A0A0K0K1G6 GAL3ST1-205ENST00000406361 1819 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
TRBV10-3A0A0K0K1G6 RAB40C-201ENST00000248139 2699 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 12.4 ms