Protein–RNA interactions for Protein: Q8NE35

CPEB3, Cytoplasmic polyadenylation element-binding protein 3, humanhuman

Known RBP Predictions only

Length 698 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPEB3Q8NE35 JUND-201ENST00000252818 1863 ntAPPRIS P1 BASIC24.26■■□□□ 1.47
CPEB3Q8NE35 OLFM2-201ENST00000264833 2019 ntAPPRIS P1 TSL 1 (best) BASIC24.26■■□□□ 1.47
CPEB3Q8NE35 GRASP-201ENST00000293662 1933 ntAPPRIS P1 TSL 1 (best) BASIC24.25■■□□□ 1.47
CPEB3Q8NE35 FMR1-219ENST00000621453 1864 ntTSL 1 (best) BASIC24.24■■□□□ 1.47
CPEB3Q8NE35 PDXP-201ENST00000215904 2010 ntAPPRIS P1 TSL 1 (best) BASIC24.24■■□□□ 1.47
CPEB3Q8NE35 RDX-206ENST00000528900 1814 ntTSL 1 (best) BASIC24.22■■□□□ 1.47
CPEB3Q8NE35 BRF1-221ENST00000619151 1530 ntTSL 5 BASIC24.22■■□□□ 1.47
CPEB3Q8NE35 GRK2-204ENST00000526285 1458 ntTSL 5 BASIC24.22■■□□□ 1.47
CPEB3Q8NE35 RNF215-203ENST00000382363 1992 ntAPPRIS P2 TSL 1 (best) BASIC24.22■■□□□ 1.47
CPEB3Q8NE35 ADRA2C-202ENST00000509482 1600 ntTSL 3 BASIC24.21■■□□□ 1.47
CPEB3Q8NE35 WSB2-211ENST00000544233 2503 ntTSL 2 BASIC24.21■■□□□ 1.47
CPEB3Q8NE35 BMP7-202ENST00000395864 1746 ntTSL 5 BASIC24.21■■□□□ 1.47
CPEB3Q8NE35 HMGB1-205ENST00000399494 1282 ntAPPRIS P1 TSL 2 BASIC24.2■■□□□ 1.46
CPEB3Q8NE35 NRGN-202ENST00000412681 1106 ntAPPRIS P1 TSL 1 (best) BASIC24.19■■□□□ 1.46
CPEB3Q8NE35 RSG1-201ENST00000375599 1545 ntAPPRIS P1 TSL 1 (best) BASIC24.18■■□□□ 1.46
CPEB3Q8NE35 EMID1-201ENST00000334018 2173 ntAPPRIS P1 TSL 1 (best) BASIC24.18■■□□□ 1.46
CPEB3Q8NE35 MAPK4-202ENST00000540640 1576 ntTSL 2 BASIC24.16■■□□□ 1.46
CPEB3Q8NE35 ECI1-201ENST00000301729 1541 ntAPPRIS P2 TSL 1 (best) BASIC24.16■■□□□ 1.46
CPEB3Q8NE35 NRTN-201ENST00000303212 1109 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
CPEB3Q8NE35 LINC01089-207ENST00000538335 630 ntTSL 3 BASIC24.16■■□□□ 1.46
CPEB3Q8NE35 IFNGR2-201ENST00000290219 2221 ntAPPRIS P3 TSL 1 (best) BASIC24.16■■□□□ 1.46
CPEB3Q8NE35 GIPC1-201ENST00000345425 1782 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
CPEB3Q8NE35 MSX2-202ENST00000507785 1188 ntTSL 2 BASIC24.15■■□□□ 1.46
CPEB3Q8NE35 TRAPPC10-202ENST00000380221 1763 ntTSL 1 (best) BASIC24.15■■□□□ 1.46
CPEB3Q8NE35 GNPTAB-206ENST00000549940 1678 ntTSL 1 (best) BASIC24.15■■□□□ 1.46
CPEB3Q8NE35 CBX4-202ENST00000448310 718 ntAPPRIS ALT2 TSL 3 BASIC24.14■■□□□ 1.45
CPEB3Q8NE35 CCM2-218ENST00000541586 1719 ntTSL 3 BASIC24.14■■□□□ 1.45
CPEB3Q8NE35 ANGPTL6-204ENST00000592641 1781 ntAPPRIS P1 TSL 1 (best) BASIC24.13■■□□□ 1.45
CPEB3Q8NE35 AC068152.1-207ENST00000573341 647 ntTSL 2 BASIC24.12■■□□□ 1.45
CPEB3Q8NE35 CHCHD4-201ENST00000295767 1603 ntTSL 2 BASIC24.12■■□□□ 1.45
CPEB3Q8NE35 UBP1-201ENST00000283628 2074 ntAPPRIS P3 TSL 2 BASIC24.11■■□□□ 1.45
CPEB3Q8NE35 CDK2AP1-203ENST00000535979 1281 ntTSL 3 BASIC24.1■■□□□ 1.45
CPEB3Q8NE35 CATIP-201ENST00000289388 1323 ntAPPRIS P1 TSL 1 (best) BASIC24.09■■□□□ 1.45
CPEB3Q8NE35 CCM2-201ENST00000258781 1894 ntAPPRIS P3 TSL 1 (best) BASIC24.07■■□□□ 1.44
CPEB3Q8NE35 ANKS1B-202ENST00000333732 1675 ntTSL 2 BASIC24.05■■□□□ 1.44
CPEB3Q8NE35 AC008105.3-203ENST00000591365 2238 ntTSL 2 BASIC24.05■■□□□ 1.44
CPEB3Q8NE35 AC025431.1-201ENST00000559684 874 ntTSL 3 BASIC24.04■■□□□ 1.44
CPEB3Q8NE35 AC243773.2-204ENST00000621428 1462 ntTSL 1 (best) BASIC24.04■■□□□ 1.44
CPEB3Q8NE35 HOXB3-207ENST00000472863 1909 ntTSL 2 BASIC24.01■■□□□ 1.43
CPEB3Q8NE35 TFEB-204ENST00000373033 2331 ntAPPRIS P1 TSL 1 (best) BASIC24.01■■□□□ 1.43
CPEB3Q8NE35 TMEM80-202ENST00000397512 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC24■■□□□ 1.43
CPEB3Q8NE35 CISD3-204ENST00000613478 2074 ntAPPRIS P1 TSL 2 BASIC24■■□□□ 1.43
CPEB3Q8NE35 TMEM229A-201ENST00000455783 2108 ntAPPRIS P1 BASIC24■■□□□ 1.43
CPEB3Q8NE35 ADNP-AS1-201ENST00000558899 927 ntTSL 3 BASIC24■■□□□ 1.43
CPEB3Q8NE35 KLF16-203ENST00000592313 508 ntTSL 3 BASIC24■■□□□ 1.43
CPEB3Q8NE35 POU3F1-201ENST00000373012 2184 ntAPPRIS P1 BASIC24■■□□□ 1.43
CPEB3Q8NE35 ABL1-201ENST00000318560 5766 ntTSL 1 (best) BASIC23.99■■□□□ 1.43
CPEB3Q8NE35 CPNE1-203ENST00000397442 1695 ntTSL 5 BASIC23.99■■□□□ 1.43
CPEB3Q8NE35 EMX1-201ENST00000258106 2188 ntAPPRIS P1 TSL 1 (best) BASIC23.97■■□□□ 1.43
CPEB3Q8NE35 CERS1-201ENST00000429504 2094 ntTSL 1 (best) BASIC23.97■■□□□ 1.43
CPEB3Q8NE35 AC105285.1-201ENST00000500914 2036 ntTSL 1 (best) BASIC23.96■■□□□ 1.43
CPEB3Q8NE35 DBP-205ENST00000601104 1489 ntTSL 1 (best) BASIC23.95■■□□□ 1.42
CPEB3Q8NE35 NIT1-201ENST00000368007 1749 ntTSL 2 BASIC23.94■■□□□ 1.42
CPEB3Q8NE35 AC079305.1-201ENST00000428541 499 ntTSL 3 BASIC23.94■■□□□ 1.42
CPEB3Q8NE35 LMNTD2-201ENST00000329451 2084 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
CPEB3Q8NE35 AGAP1-202ENST00000336665 5427 ntAPPRIS P3 TSL 1 (best) BASIC23.93■■□□□ 1.42
CPEB3Q8NE35 SMARCD3-201ENST00000262188 1993 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
CPEB3Q8NE35 NRG3-203ENST00000404547 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC23.93■■□□□ 1.42
CPEB3Q8NE35 ARL8A-204ENST00000614750 1727 ntTSL 3 BASIC23.93■■□□□ 1.42
CPEB3Q8NE35 BCL7B-201ENST00000223368 1975 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
CPEB3Q8NE35 DEXI-201ENST00000331808 1561 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
CPEB3Q8NE35 CDKN2D-202ENST00000393599 1422 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
CPEB3Q8NE35 AC120057.4-201ENST00000624722 1615 ntBASIC23.92■■□□□ 1.42
CPEB3Q8NE35 SLC22A23-201ENST00000380298 1574 ntTSL 1 (best) BASIC23.91■■□□□ 1.42
CPEB3Q8NE35 TUSC1-201ENST00000358022 2052 ntAPPRIS P1 BASIC23.91■■□□□ 1.42
CPEB3Q8NE35 ZBTB7A-202ENST00000601588 2083 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
CPEB3Q8NE35 E2F4-201ENST00000379378 2096 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
CPEB3Q8NE35 RARRES2P7-201ENST00000567349 469 ntBASIC23.9■■□□□ 1.42
CPEB3Q8NE35 GATA6-202ENST00000581694 2057 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
CPEB3Q8NE35 CTDNEP1-201ENST00000318988 1549 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.42
CPEB3Q8NE35 LFNG-203ENST00000359574 1377 ntAPPRIS ALT1 TSL 1 (best) BASIC23.89■■□□□ 1.41
CPEB3Q8NE35 ATRNL1-209ENST00000609571 1818 ntTSL 1 (best) BASIC23.89■■□□□ 1.41
CPEB3Q8NE35 MSRB2-201ENST00000376510 1803 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
CPEB3Q8NE35 CACNG6-201ENST00000252729 1853 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
CPEB3Q8NE35 KHDRBS3-201ENST00000355849 1977 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
CPEB3Q8NE35 AC092647.5-201ENST00000426595 1732 ntAPPRIS P1 TSL 5 BASIC23.85■■□□□ 1.41
CPEB3Q8NE35 AC009133.5-201ENST00000562594 473 ntTSL 4 BASIC23.85■■□□□ 1.41
CPEB3Q8NE35 CERS2-201ENST00000271688 2544 ntAPPRIS P1 TSL 5 BASIC23.84■■□□□ 1.41
CPEB3Q8NE35 HOXB3-211ENST00000490677 1109 ntTSL 1 (best) BASIC23.83■■□□□ 1.41
CPEB3Q8NE35 TP53I13-201ENST00000301057 1530 ntAPPRIS P2 TSL 1 (best) BASIC23.83■■□□□ 1.41
CPEB3Q8NE35 RNF130-201ENST00000261947 1766 ntTSL 1 (best) BASIC23.83■■□□□ 1.4
CPEB3Q8NE35 ST7-208ENST00000393451 2110 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.4
CPEB3Q8NE35 SLC2A4RG-201ENST00000266077 1731 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
CPEB3Q8NE35 AL133380.1-201ENST00000506013 324 ntBASIC23.79■■□□□ 1.4
CPEB3Q8NE35 SETD8P1-201ENST00000623146 1180 ntBASIC23.79■■□□□ 1.4
CPEB3Q8NE35 GLT8D1-201ENST00000266014 1849 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
CPEB3Q8NE35 IL13RA1-201ENST00000371642 1096 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
CPEB3Q8NE35 TXN-202ENST00000374517 869 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
CPEB3Q8NE35 TPRG1L-202ENST00000378344 2414 ntAPPRIS P1 TSL 2 BASIC23.78■■□□□ 1.4
CPEB3Q8NE35 ATPAF1-201ENST00000329231 1241 ntTSL 2 BASIC23.77■■□□□ 1.4
CPEB3Q8NE35 TRNP1-201ENST00000522111 1958 ntAPPRIS P2 TSL 1 (best) BASIC23.77■■□□□ 1.4
CPEB3Q8NE35 FAAP20-204ENST00000400919 1413 ntTSL 3 BASIC23.75■■□□□ 1.39
CPEB3Q8NE35 FTCD-203ENST00000397746 1878 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
CPEB3Q8NE35 FOXD3-201ENST00000371116 2086 ntAPPRIS P1 BASIC23.74■■□□□ 1.39
CPEB3Q8NE35 CGREF1-202ENST00000312734 1610 ntAPPRIS P2 TSL 5 BASIC23.74■■□□□ 1.39
CPEB3Q8NE35 INAFM1-201ENST00000552360 1255 ntAPPRIS P1 BASIC23.74■■□□□ 1.39
CPEB3Q8NE35 KCNK3-202ENST00000620977 1956 ntTSL 1 (best) BASIC23.72■■□□□ 1.39
CPEB3Q8NE35 DPF1-204ENST00000416611 2341 ntTSL 5 BASIC23.71■■□□□ 1.39
CPEB3Q8NE35 SLC15A4-201ENST00000266771 2779 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.39
CPEB3Q8NE35 CHMP4B-201ENST00000217402 1646 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.39
Retrieved 100 of 98,524 protein–RNA pairs in 13.5 ms