Protein–RNA interactions for Protein: Q8NE35

CPEB3, Cytoplasmic polyadenylation element-binding protein 3, humanhuman

Known RBP Predictions only

Length 698 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPEB3Q8NE35 FBLL1-201ENST00000338333 1519 ntAPPRIS P1 BASIC29.73■■■□□ 2.35
CPEB3Q8NE35 TCF15-201ENST00000246080 1555 ntAPPRIS P1 TSL 1 (best) BASIC29.42■■■□□ 2.3
CPEB3Q8NE35 AL356512.1-201ENST00000607453 1739 ntBASIC29.01■■■□□ 2.23
CPEB3Q8NE35 CSNK1E-204ENST00000403904 1580 ntAPPRIS P1 TSL 5 BASIC28.96■■■□□ 2.23
CPEB3Q8NE35 AES-202ENST00000327141 1608 ntAPPRIS P1 TSL 1 (best) BASIC28.77■■■□□ 2.2
CPEB3Q8NE35 PPP1CA-203ENST00000376745 1476 ntAPPRIS P1 TSL 1 (best) BASIC28.73■■■□□ 2.19
CPEB3Q8NE35 HES6-203ENST00000409160 1600 ntTSL 2 BASIC28.61■■■□□ 2.17
CPEB3Q8NE35 SSSCA1-205ENST00000527920 806 ntTSL 3 BASIC28.39■■■□□ 2.14
CPEB3Q8NE35 PRR5-217ENST00000617066 1726 ntTSL 5 BASIC28.38■■■□□ 2.13
CPEB3Q8NE35 SEPT3-204ENST00000406029 1866 ntTSL 5 BASIC28.29■■■□□ 2.12
CPEB3Q8NE35 PHF10-201ENST00000339209 1719 ntAPPRIS P4 TSL 1 (best) BASIC28.2■■■□□ 2.1
CPEB3Q8NE35 PRR5-216ENST00000611394 1843 ntTSL 2 BASIC28.11■■■□□ 2.09
CPEB3Q8NE35 HRAS-203ENST00000397596 1100 ntAPPRIS P1 TSL 3 BASIC27.82■■■□□ 2.04
CPEB3Q8NE35 ZFYVE21-201ENST00000216602 1521 ntAPPRIS ALT2 TSL 2 BASIC27.78■■■□□ 2.04
CPEB3Q8NE35 PTF1A-201ENST00000376504 1537 ntAPPRIS P1 TSL 1 (best) BASIC27.77■■■□□ 2.04
CPEB3Q8NE35 OLFM1-208ENST00000392991 1057 ntTSL 2 BASIC27.5■■□□□ 1.99
CPEB3Q8NE35 AC116565.1-201ENST00000610212 2421 ntAPPRIS P1 BASIC27.38■■□□□ 1.97
CPEB3Q8NE35 MPND-201ENST00000262966 1567 ntAPPRIS P3 TSL 1 (best) BASIC27.36■■□□□ 1.97
CPEB3Q8NE35 ANKRD60-201ENST00000457363 1038 ntAPPRIS P1 TSL 5 BASIC27.34■■□□□ 1.97
CPEB3Q8NE35 TAF5L-202ENST00000366674 492 ntTSL 3 BASIC27.3■■□□□ 1.96
CPEB3Q8NE35 NECTIN3-201ENST00000319792 1549 ntAPPRIS ALT2 TSL 1 (best) BASIC27.3■■□□□ 1.96
CPEB3Q8NE35 GIPC1-205ENST00000586027 1386 ntAPPRIS P1 TSL 2 BASIC27.25■■□□□ 1.95
CPEB3Q8NE35 FBRSL1-201ENST00000434748 5568 ntAPPRIS P2 TSL 1 (best) BASIC27.22■■□□□ 1.95
CPEB3Q8NE35 FAM149A-205ENST00000502970 1990 ntAPPRIS P2 TSL 5 BASIC27.16■■□□□ 1.94
CPEB3Q8NE35 PPP2CB-204ENST00000518564 691 ntTSL 3 BASIC27.09■■□□□ 1.93
CPEB3Q8NE35 CYHR1-209ENST00000530374 1870 ntTSL 3 BASIC27.04■■□□□ 1.92
CPEB3Q8NE35 CAPNS1-206ENST00000588815 1471 ntAPPRIS P2 TSL 1 (best) BASIC27.03■■□□□ 1.92
CPEB3Q8NE35 NT5DC2-203ENST00000459839 1639 ntTSL 1 (best) BASIC26.98■■□□□ 1.91
CPEB3Q8NE35 SLC25A28-201ENST00000370495 1451 ntAPPRIS P1 TSL 1 (best) BASIC26.93■■□□□ 1.9
CPEB3Q8NE35 ZNF358-202ENST00000597229 1954 ntAPPRIS P1 TSL 2 BASIC26.93■■□□□ 1.9
CPEB3Q8NE35 RAB12-201ENST00000329286 2137 ntAPPRIS P1 TSL 1 (best) BASIC26.86■■□□□ 1.89
CPEB3Q8NE35 MPND-207ENST00000599840 1611 ntAPPRIS ALT2 TSL 5 BASIC26.68■■□□□ 1.86
CPEB3Q8NE35 FAM149A-215ENST00000514153 2070 ntAPPRIS P2 TSL 5 BASIC26.68■■□□□ 1.86
CPEB3Q8NE35 CSNK1E-206ENST00000413574 1631 ntTSL 5 BASIC26.57■■□□□ 1.84
CPEB3Q8NE35 UBE2M-201ENST00000253023 1508 ntAPPRIS P1 TSL 1 (best) BASIC26.57■■□□□ 1.84
CPEB3Q8NE35 METRNL-201ENST00000320095 1605 ntAPPRIS P1 TSL 1 (best) BASIC26.57■■□□□ 1.84
CPEB3Q8NE35 TRIP10-202ENST00000313285 2035 ntAPPRIS P1 TSL 1 (best) BASIC26.56■■□□□ 1.84
CPEB3Q8NE35 CCM2-219ENST00000544363 1620 ntTSL 3 BASIC26.54■■□□□ 1.84
CPEB3Q8NE35 GALR3-201ENST00000249041 1157 ntAPPRIS P1 TSL 1 (best) BASIC26.53■■□□□ 1.84
CPEB3Q8NE35 CMTM4-202ENST00000394106 1187 ntAPPRIS P1 TSL 1 (best) BASIC26.47■■□□□ 1.83
CPEB3Q8NE35 CMTM4-204ENST00000563952 1023 ntTSL 1 (best) BASIC26.47■■□□□ 1.83
CPEB3Q8NE35 CDV3-203ENST00000431519 955 ntTSL 1 (best) BASIC26.44■■□□□ 1.82
CPEB3Q8NE35 PPP2CB-201ENST00000221138 2006 ntAPPRIS P1 TSL 1 (best) BASIC26.41■■□□□ 1.82
CPEB3Q8NE35 INO80B-201ENST00000233331 1261 ntAPPRIS P1 TSL 1 (best) BASIC26.4■■□□□ 1.82
CPEB3Q8NE35 CACNG8-202ENST00000638874 1278 ntAPPRIS P2 TSL 1 (best) BASIC26.4■■□□□ 1.82
CPEB3Q8NE35 AL357033.3-201ENST00000620143 614 ntTSL 3 BASIC26.32■■□□□ 1.8
CPEB3Q8NE35 NKAIN4-203ENST00000370316 1430 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
CPEB3Q8NE35 INO80B-203ENST00000409917 796 ntTSL 2 BASIC26.3■■□□□ 1.8
CPEB3Q8NE35 C11orf68-202ENST00000449692 1559 ntAPPRIS P3 TSL 1 (best) BASIC26.24■■□□□ 1.79
CPEB3Q8NE35 ACOT7-209ENST00000545482 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC26.22■■□□□ 1.79
CPEB3Q8NE35 NT5DC2-202ENST00000422318 1795 ntAPPRIS ALT2 TSL 5 BASIC26.22■■□□□ 1.79
CPEB3Q8NE35 PWWP2B-202ENST00000631148 2013 ntTSL 5 BASIC26.21■■□□□ 1.79
CPEB3Q8NE35 TGIF1-202ENST00000343820 2076 ntAPPRIS P1 TSL 1 (best) BASIC26.19■■□□□ 1.78
CPEB3Q8NE35 FOXD1-202ENST00000615637 2272 ntAPPRIS P1 BASIC26.13■■□□□ 1.77
CPEB3Q8NE35 FAM89B-203ENST00000530349 1263 ntAPPRIS P1 TSL 2 BASIC26.1■■□□□ 1.77
CPEB3Q8NE35 AC015813.7-201ENST00000623294 581 ntBASIC26.01■■□□□ 1.75
CPEB3Q8NE35 NT5M-207ENST00000616989 1635 ntTSL 1 (best) BASIC25.99■■□□□ 1.75
CPEB3Q8NE35 ILK-212ENST00000532063 1617 ntTSL 2 BASIC25.94■■□□□ 1.74
CPEB3Q8NE35 RAN-202ENST00000392369 1530 ntAPPRIS P1 TSL 1 (best) BASIC25.88■■□□□ 1.73
CPEB3Q8NE35 HAPLN2-201ENST00000255039 1771 ntAPPRIS P1 TSL 1 (best) BASIC25.86■■□□□ 1.73
CPEB3Q8NE35 KHSRP-213ENST00000619396 2226 ntAPPRIS ALT2 TSL 5 BASIC25.85■■□□□ 1.73
CPEB3Q8NE35 PABPN1-201ENST00000216727 2001 ntAPPRIS P2 TSL 1 (best) BASIC25.85■■□□□ 1.73
CPEB3Q8NE35 B4GALT2-203ENST00000372324 2203 ntAPPRIS P1 TSL 1 (best) BASIC25.84■■□□□ 1.73
CPEB3Q8NE35 HAGHL-201ENST00000341413 1701 ntTSL 2 BASIC25.8■■□□□ 1.72
CPEB3Q8NE35 INO80B-WBP1-202ENST00000452361 2040 ntAPPRIS P5 TSL 2 BASIC25.73■■□□□ 1.71
CPEB3Q8NE35 FEZF2-203ENST00000486811 2001 ntAPPRIS P1 TSL 5 BASIC25.73■■□□□ 1.71
CPEB3Q8NE35 C11orf63-202ENST00000307257 1964 ntTSL 2 BASIC25.73■■□□□ 1.71
CPEB3Q8NE35 LIMCH1-211ENST00000509638 1570 ntTSL 1 (best) BASIC25.72■■□□□ 1.71
CPEB3Q8NE35 SATB1-AS1-216ENST00000598149 1119 ntTSL 2 BASIC25.71■■□□□ 1.71
CPEB3Q8NE35 C11orf84-201ENST00000294244 2024 ntAPPRIS P1 TSL 1 (best) BASIC25.7■■□□□ 1.7
CPEB3Q8NE35 MAPK3-201ENST00000263025 1861 ntAPPRIS P3 TSL 1 (best) BASIC25.7■■□□□ 1.7
CPEB3Q8NE35 ECHS1-201ENST00000368547 1617 ntAPPRIS P1 TSL 1 (best) BASIC25.7■■□□□ 1.7
CPEB3Q8NE35 ALYREF-202ENST00000505490 1088 ntAPPRIS P1 TSL 1 (best) BASIC25.68■■□□□ 1.7
CPEB3Q8NE35 LMO2-202ENST00000395833 1687 ntAPPRIS P1 TSL 1 (best) BASIC25.68■■□□□ 1.7
CPEB3Q8NE35 AC008738.5-201ENST00000587312 482 ntTSL 3 BASIC25.66■■□□□ 1.7
CPEB3Q8NE35 AL136373.1-201ENST00000634804 1449 ntAPPRIS P1 BASIC25.65■■□□□ 1.7
CPEB3Q8NE35 MAPK3-202ENST00000322266 1743 ntTSL 5 BASIC25.64■■□□□ 1.7
CPEB3Q8NE35 HOXB3-208ENST00000476342 1420 ntAPPRIS P1 TSL 1 (best) BASIC25.61■■□□□ 1.69
CPEB3Q8NE35 FAM89B-202ENST00000449319 1337 ntTSL 1 (best) BASIC25.58■■□□□ 1.69
CPEB3Q8NE35 CYBA-201ENST00000261623 797 ntAPPRIS P1 TSL 1 (best) BASIC25.57■■□□□ 1.68
CPEB3Q8NE35 CRIP2-201ENST00000329146 1857 ntAPPRIS P1 TSL 1 (best) BASIC25.57■■□□□ 1.68
CPEB3Q8NE35 AC006077.2-201ENST00000623591 457 ntBASIC25.51■■□□□ 1.67
CPEB3Q8NE35 Z97634.1-201ENST00000412293 1715 ntTSL 1 (best) BASIC25.48■■□□□ 1.67
CPEB3Q8NE35 CHCHD4-202ENST00000396914 1405 ntAPPRIS P1 TSL 1 (best) BASIC25.46■■□□□ 1.67
CPEB3Q8NE35 KIAA2013-203ENST00000616327 2170 ntAPPRIS P1 TSL 5 BASIC25.42■■□□□ 1.66
CPEB3Q8NE35 SLC25A10-203ENST00000545862 1911 ntTSL 1 (best) BASIC25.4■■□□□ 1.66
CPEB3Q8NE35 FAM19A5-203ENST00000402357 1508 ntTSL 1 (best) BASIC25.37■■□□□ 1.65
CPEB3Q8NE35 CTDNEP1-208ENST00000573600 1724 ntAPPRIS P1 TSL 5 BASIC25.37■■□□□ 1.65
CPEB3Q8NE35 ZNRF2P1-201ENST00000441407 443 ntBASIC25.37■■□□□ 1.65
CPEB3Q8NE35 DRD4-201ENST00000176183 1375 ntAPPRIS P1 TSL 1 (best) BASIC25.34■■□□□ 1.65
CPEB3Q8NE35 TPRG1L-201ENST00000344579 2189 ntTSL 1 (best) BASIC25.33■■□□□ 1.65
CPEB3Q8NE35 AGAP1-204ENST00000409457 2165 ntTSL 1 (best) BASIC25.33■■□□□ 1.65
CPEB3Q8NE35 ANKRD65-203ENST00000454272 1506 ntAPPRIS P1 TSL 5 BASIC25.29■■□□□ 1.64
CPEB3Q8NE35 AC145285.7-201ENST00000614819 1539 ntBASIC25.29■■□□□ 1.64
CPEB3Q8NE35 PRELID2-202ENST00000394450 1102 ntTSL 1 (best) BASIC25.26■■□□□ 1.63
CPEB3Q8NE35 CSNK1E-205ENST00000405675 2127 ntTSL 5 BASIC25.24■■□□□ 1.63
CPEB3Q8NE35 NT5M-201ENST00000389022 1617 ntAPPRIS P1 TSL 1 (best) BASIC25.23■■□□□ 1.63
CPEB3Q8NE35 RAB43-207ENST00000476465 1627 ntTSL 3 BASIC25.23■■□□□ 1.63
CPEB3Q8NE35 AGTRAP-204ENST00000376637 1067 ntTSL 2 BASIC25.14■■□□□ 1.62
CPEB3Q8NE35 MAF-203ENST00000569649 1217 ntAPPRIS ALT2 TSL 5 BASIC25.14■■□□□ 1.62
Retrieved 100 of 98,524 protein–RNA pairs in 14 ms