Protein–RNA interactions for Protein: Q5VVX9

UBE2U, Ubiquitin-conjugating enzyme E2 U, humanhuman

Predictions only

Length 321 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2UQ5VVX9 PPP1R1A-201ENST00000257905 1826 ntAPPRIS P1 TSL 1 (best) BASIC25.19■■□□□ 1.62
UBE2UQ5VVX9 BCL7B-201ENST00000223368 1975 ntAPPRIS P1 TSL 1 (best) BASIC25.19■■□□□ 1.62
UBE2UQ5VVX9 AGAP3-216ENST00000479901 1881 ntTSL 5 BASIC25.19■■□□□ 1.62
UBE2UQ5VVX9 ANGPTL6-204ENST00000592641 1781 ntAPPRIS P1 TSL 1 (best) BASIC25.18■■□□□ 1.62
UBE2UQ5VVX9 BRF1-213ENST00000548421 1452 ntTSL 1 (best) BASIC25.17■■□□□ 1.62
UBE2UQ5VVX9 VPS37D-201ENST00000324941 1624 ntAPPRIS P1 TSL 1 (best) BASIC25.17■■□□□ 1.62
UBE2UQ5VVX9 CUEDC1-201ENST00000360238 2193 ntAPPRIS P1 TSL 2 BASIC25.17■■□□□ 1.62
UBE2UQ5VVX9 BRF1-221ENST00000619151 1530 ntTSL 5 BASIC25.17■■□□□ 1.62
UBE2UQ5VVX9 ANKRD13D-211ENST00000511455 2139 ntAPPRIS P1 TSL 1 (best) BASIC25.16■■□□□ 1.62
UBE2UQ5VVX9 ABCB10P3-201ENST00000561950 2166 ntBASIC25.15■■□□□ 1.62
UBE2UQ5VVX9 RRAGC-201ENST00000373001 2732 ntAPPRIS P1 TSL 1 (best) BASIC25.15■■□□□ 1.62
UBE2UQ5VVX9 GATA6-202ENST00000581694 2057 ntAPPRIS P1 TSL 1 (best) BASIC25.15■■□□□ 1.62
UBE2UQ5VVX9 ELK4-201ENST00000289703 2118 ntTSL 1 (best) BASIC25.14■■□□□ 1.62
UBE2UQ5VVX9 LIMCH1-211ENST00000509638 1570 ntTSL 1 (best) BASIC25.14■■□□□ 1.61
UBE2UQ5VVX9 CCZ1B-215ENST00000626257 2211 ntTSL 2 BASIC25.13■■□□□ 1.61
UBE2UQ5VVX9 NGB-201ENST00000298352 1884 ntAPPRIS P1 TSL 1 (best) BASIC25.12■■□□□ 1.61
UBE2UQ5VVX9 RNF215-203ENST00000382363 1992 ntAPPRIS P2 TSL 1 (best) BASIC25.11■■□□□ 1.61
UBE2UQ5VVX9 RTN2-201ENST00000245923 2293 ntTSL 1 (best) BASIC25.11■■□□□ 1.61
UBE2UQ5VVX9 TPRA1-201ENST00000296210 1725 ntTSL 1 (best) BASIC25.1■■□□□ 1.61
UBE2UQ5VVX9 BIN1-204ENST00000348750 2074 ntTSL 1 (best) BASIC25.1■■□□□ 1.61
UBE2UQ5VVX9 ZBTB12-201ENST00000375527 1875 ntAPPRIS P1 TSL 1 (best) BASIC25.09■■□□□ 1.61
UBE2UQ5VVX9 CAPNS1-201ENST00000246533 1918 ntAPPRIS P2 TSL 1 (best) BASIC25.09■■□□□ 1.61
UBE2UQ5VVX9 RNF130-205ENST00000521389 2263 ntAPPRIS P1 TSL 1 (best) BASIC25.09■■□□□ 1.61
UBE2UQ5VVX9 TESK1-206ENST00000620767 2438 ntAPPRIS P1 TSL 5 BASIC25.08■■□□□ 1.61
UBE2UQ5VVX9 ANGPTL6-201ENST00000253109 1900 ntAPPRIS P1 TSL 1 (best) BASIC25.08■■□□□ 1.6
UBE2UQ5VVX9 EXOC3L4-201ENST00000380069 2293 ntAPPRIS P1 TSL 1 (best) BASIC25.07■■□□□ 1.6
UBE2UQ5VVX9 PQLC1-202ENST00000357575 2475 ntAPPRIS ALT1 TSL 5 BASIC25.07■■□□□ 1.6
UBE2UQ5VVX9 KLHL35-204ENST00000539798 1936 ntAPPRIS P1 TSL 1 (best) BASIC25.06■■□□□ 1.6
UBE2UQ5VVX9 NIT1-201ENST00000368007 1749 ntTSL 2 BASIC25.06■■□□□ 1.6
UBE2UQ5VVX9 AC139426.1-201ENST00000568218 2529 ntBASIC25.05■■□□□ 1.6
UBE2UQ5VVX9 FGFRL1-205ENST00000510644 2304 ntAPPRIS P1 TSL 1 (best) BASIC25.03■■□□□ 1.6
UBE2UQ5VVX9 SHF-206ENST00000560471 2499 ntTSL 5 BASIC25.03■■□□□ 1.6
UBE2UQ5VVX9 FAM19A5-203ENST00000402357 1508 ntTSL 1 (best) BASIC25.02■■□□□ 1.6
UBE2UQ5VVX9 TPRA1-202ENST00000355552 1933 ntAPPRIS P1 TSL 1 (best) BASIC25.02■■□□□ 1.6
UBE2UQ5VVX9 MSRB2-201ENST00000376510 1803 ntAPPRIS P1 TSL 1 (best) BASIC25.01■■□□□ 1.59
UBE2UQ5VVX9 CYP26C1-201ENST00000285949 1569 ntAPPRIS P1 TSL 1 (best) BASIC25.01■■□□□ 1.59
UBE2UQ5VVX9 TPM2-203ENST00000378292 2147 ntAPPRIS ALT1 TSL 1 (best) BASIC24.99■■□□□ 1.59
UBE2UQ5VVX9 UCK1-201ENST00000372208 2063 ntTSL 1 (best) BASIC24.97■■□□□ 1.59
UBE2UQ5VVX9 PANK2-207ENST00000610179 1807 ntAPPRIS ALT2 TSL 1 (best) BASIC24.97■■□□□ 1.59
UBE2UQ5VVX9 NEUROG2-201ENST00000313341 2287 ntAPPRIS P1 TSL 1 (best) BASIC24.96■■□□□ 1.59
UBE2UQ5VVX9 PPP2CB-204ENST00000518564 691 ntTSL 3 BASIC24.95■■□□□ 1.58
UBE2UQ5VVX9 ARL8A-204ENST00000614750 1727 ntTSL 3 BASIC24.95■■□□□ 1.58
UBE2UQ5VVX9 AL136373.1-201ENST00000634804 1449 ntAPPRIS P1 BASIC24.94■■□□□ 1.58
UBE2UQ5VVX9 FZD2-201ENST00000315323 2112 ntAPPRIS P1 BASIC24.92■■□□□ 1.58
UBE2UQ5VVX9 FADS3-201ENST00000278829 1779 ntAPPRIS P1 TSL 1 (best) BASIC24.92■■□□□ 1.58
UBE2UQ5VVX9 ATRNL1-207ENST00000527407 1583 ntTSL 5 BASIC24.92■■□□□ 1.58
UBE2UQ5VVX9 RCC1L-202ENST00000614461 2419 ntTSL 1 (best) BASIC24.88■■□□□ 1.57
UBE2UQ5VVX9 MAPK12-201ENST00000215659 1918 ntAPPRIS P1 TSL 1 (best) BASIC24.88■■□□□ 1.57
UBE2UQ5VVX9 DCBLD1-201ENST00000296955 1979 ntAPPRIS P2 TSL 1 (best) BASIC24.86■■□□□ 1.57
UBE2UQ5VVX9 ARPC5L-202ENST00000353214 2507 ntAPPRIS P1 TSL 2 BASIC24.86■■□□□ 1.57
UBE2UQ5VVX9 CGREF1-203ENST00000402394 1906 ntAPPRIS P2 TSL 2 BASIC24.86■■□□□ 1.57
UBE2UQ5VVX9 GNB5-202ENST00000358784 1735 ntAPPRIS ALT1 TSL 1 (best) BASIC24.86■■□□□ 1.57
UBE2UQ5VVX9 CCM2-218ENST00000541586 1719 ntTSL 3 BASIC24.86■■□□□ 1.57
UBE2UQ5VVX9 PURG-201ENST00000339382 2693 ntTSL 1 (best) BASIC24.85■■□□□ 1.57
UBE2UQ5VVX9 TPRA1-209ENST00000489960 1903 ntAPPRIS P1 TSL 5 BASIC24.85■■□□□ 1.57
UBE2UQ5VVX9 COL13A1-212ENST00000520133 1833 ntTSL 5 BASIC24.85■■□□□ 1.57
UBE2UQ5VVX9 AC120057.4-201ENST00000624722 1615 ntBASIC24.83■■□□□ 1.57
UBE2UQ5VVX9 PHOX2A-201ENST00000298231 1699 ntAPPRIS P1 TSL 1 (best) BASIC24.83■■□□□ 1.57
UBE2UQ5VVX9 CADPS-215ENST00000490353 2669 ntTSL 5 BASIC24.83■■□□□ 1.57
UBE2UQ5VVX9 ZIC2-201ENST00000376335 2983 ntAPPRIS P1 TSL 1 (best) BASIC24.83■■□□□ 1.56
UBE2UQ5VVX9 GIPC1-203ENST00000393033 1926 ntAPPRIS P1 TSL 1 (best) BASIC24.82■■□□□ 1.56
UBE2UQ5VVX9 FAM117A-201ENST00000240364 2365 ntAPPRIS P2 TSL 1 (best) BASIC24.8■■□□□ 1.56
UBE2UQ5VVX9 AC105285.1-201ENST00000500914 2036 ntTSL 1 (best) BASIC24.79■■□□□ 1.56
UBE2UQ5VVX9 HOXD8-201ENST00000313173 1917 ntAPPRIS P3 TSL 2 BASIC24.78■■□□□ 1.56
UBE2UQ5VVX9 KCTD17-202ENST00000403888 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC24.78■■□□□ 1.56
UBE2UQ5VVX9 DRD4-201ENST00000176183 1375 ntAPPRIS P1 TSL 1 (best) BASIC24.78■■□□□ 1.56
UBE2UQ5VVX9 VWA1-201ENST00000338660 2147 ntTSL 2 BASIC24.76■■□□□ 1.55
UBE2UQ5VVX9 PPP1CC-202ENST00000340766 1472 ntTSL 2 BASIC24.74■■□□□ 1.55
UBE2UQ5VVX9 LTB4R2-204ENST00000533293 1515 ntAPPRIS P1 TSL 1 (best) BASIC24.74■■□□□ 1.55
UBE2UQ5VVX9 TRAPPC10-202ENST00000380221 1763 ntTSL 1 (best) BASIC24.74■■□□□ 1.55
UBE2UQ5VVX9 HMX1-201ENST00000400677 1895 ntAPPRIS P1 TSL 1 (best) BASIC24.74■■□□□ 1.55
UBE2UQ5VVX9 BMP7-202ENST00000395864 1746 ntTSL 5 BASIC24.71■■□□□ 1.55
UBE2UQ5VVX9 HOXB3-208ENST00000476342 1420 ntAPPRIS P1 TSL 1 (best) BASIC24.69■■□□□ 1.54
UBE2UQ5VVX9 COL13A1-210ENST00000517713 2007 ntAPPRIS ALT2 TSL 5 BASIC24.69■■□□□ 1.54
UBE2UQ5VVX9 PQLC1-203ENST00000397778 2555 ntAPPRIS P3 TSL 1 (best) BASIC24.69■■□□□ 1.54
UBE2UQ5VVX9 CUL4A-202ENST00000375440 2364 ntAPPRIS P1 TSL 1 (best) BASIC24.69■■□□□ 1.54
UBE2UQ5VVX9 SLC2A4RG-201ENST00000266077 1731 ntAPPRIS P1 TSL 1 (best) BASIC24.68■■□□□ 1.54
UBE2UQ5VVX9 COL13A1-203ENST00000398969 2267 ntAPPRIS ALT2 TSL 5 BASIC24.68■■□□□ 1.54
UBE2UQ5VVX9 SMARCD3-201ENST00000262188 1993 ntAPPRIS P1 TSL 1 (best) BASIC24.67■■□□□ 1.54
UBE2UQ5VVX9 PCYT2-205ENST00000570391 1857 ntTSL 2 BASIC24.67■■□□□ 1.54
UBE2UQ5VVX9 ABHD12-201ENST00000339157 2117 ntAPPRIS P1 TSL 2 BASIC24.67■■□□□ 1.54
UBE2UQ5VVX9 SECTM1-201ENST00000269389 2235 ntAPPRIS P2 TSL 1 (best) BASIC24.66■■□□□ 1.54
UBE2UQ5VVX9 ARRDC1-201ENST00000371421 1586 ntAPPRIS P1 TSL 1 (best) BASIC24.66■■□□□ 1.54
UBE2UQ5VVX9 GNPTAB-206ENST00000549940 1678 ntTSL 1 (best) BASIC24.66■■□□□ 1.54
UBE2UQ5VVX9 WDSUB1-205ENST00000409990 1920 ntAPPRIS P1 TSL 2 BASIC24.65■■□□□ 1.54
UBE2UQ5VVX9 MXI1-201ENST00000239007 2424 ntAPPRIS ALT1 TSL 1 (best) BASIC24.64■■□□□ 1.54
UBE2UQ5VVX9 TMEM9-201ENST00000367330 1959 ntAPPRIS P3 TSL 1 (best) BASIC24.64■■□□□ 1.54
UBE2UQ5VVX9 ITGA9-203ENST00000422441 2282 ntTSL 1 (best) BASIC24.64■■□□□ 1.53
UBE2UQ5VVX9 JUND-201ENST00000252818 1863 ntAPPRIS P1 BASIC24.62■■□□□ 1.53
UBE2UQ5VVX9 MPST-201ENST00000341116 1504 ntAPPRIS P1 TSL 5 BASIC24.62■■□□□ 1.53
UBE2UQ5VVX9 TMEM266-201ENST00000388942 2520 ntAPPRIS P1 TSL 5 BASIC24.62■■□□□ 1.53
UBE2UQ5VVX9 FEV-201ENST00000295727 1879 ntAPPRIS P1 TSL 1 (best) BASIC24.6■■□□□ 1.53
UBE2UQ5VVX9 AMN-201ENST00000299155 1907 ntAPPRIS P2 TSL 1 (best) BASIC24.6■■□□□ 1.53
UBE2UQ5VVX9 HOXB3-207ENST00000472863 1909 ntTSL 2 BASIC24.6■■□□□ 1.53
UBE2UQ5VVX9 TMEM158-201ENST00000503771 1813 ntAPPRIS P1 BASIC24.6■■□□□ 1.53
UBE2UQ5VVX9 SIRT3-201ENST00000382743 2543 ntAPPRIS P2 TSL 1 (best) BASIC24.59■■□□□ 1.53
UBE2UQ5VVX9 SENP3-201ENST00000321337 2611 ntAPPRIS P1 TSL 1 (best) BASIC24.58■■□□□ 1.53
UBE2UQ5VVX9 EMC10-202ENST00000376918 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC24.57■■□□□ 1.52
UBE2UQ5VVX9 INO80B-201ENST00000233331 1261 ntAPPRIS P1 TSL 1 (best) BASIC24.56■■□□□ 1.52
UBE2UQ5VVX9 AGFG1-205ENST00000409979 2089 ntAPPRIS ALT1 TSL 5 BASIC24.56■■□□□ 1.52
Retrieved 100 of 98,524 protein–RNA pairs in 24.4 ms