Protein–RNA interactions for Protein: A0A1B0GX56

TRDV1, T-cell receptor delta variable 1 (Fragment), humanhuman

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRDV1A0A1B0GX56 MATK-201ENST00000310132 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC24.67■■□□□ 1.54
TRDV1A0A1B0GX56 FTCD-204ENST00000397748 1955 ntTSL 1 (best) BASIC24.67■■□□□ 1.54
TRDV1A0A1B0GX56 CYP26C1-201ENST00000285949 1569 ntAPPRIS P1 TSL 1 (best) BASIC24.67■■□□□ 1.54
TRDV1A0A1B0GX56 MEX3D-201ENST00000402693 2850 ntAPPRIS P2 TSL 1 (best) BASIC24.66■■□□□ 1.54
TRDV1A0A1B0GX56 MAPK13-201ENST00000211287 2052 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
TRDV1A0A1B0GX56 GATA6-202ENST00000581694 2057 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
TRDV1A0A1B0GX56 ELK4-201ENST00000289703 2118 ntTSL 1 (best) BASIC24.62■■□□□ 1.53
TRDV1A0A1B0GX56 ST6GALNAC6-203ENST00000373142 2448 ntTSL 1 (best) BASIC24.61■■□□□ 1.53
TRDV1A0A1B0GX56 NIT1-201ENST00000368007 1749 ntTSL 2 BASIC24.61■■□□□ 1.53
TRDV1A0A1B0GX56 ABCB10P1-201ENST00000614297 2181 ntBASIC24.6■■□□□ 1.53
TRDV1A0A1B0GX56 AGAP3-216ENST00000479901 1881 ntTSL 5 BASIC24.58■■□□□ 1.53
TRDV1A0A1B0GX56 TPI1-201ENST00000229270 1763 ntTSL 1 (best) BASIC24.57■■□□□ 1.52
TRDV1A0A1B0GX56 DRD4-201ENST00000176183 1375 ntAPPRIS P1 TSL 1 (best) BASIC24.57■■□□□ 1.52
TRDV1A0A1B0GX56 MSRB2-201ENST00000376510 1803 ntAPPRIS P1 TSL 1 (best) BASIC24.56■■□□□ 1.52
TRDV1A0A1B0GX56 ZBTB12-201ENST00000375527 1875 ntAPPRIS P1 TSL 1 (best) BASIC24.55■■□□□ 1.52
TRDV1A0A1B0GX56 HOXB3-208ENST00000476342 1420 ntAPPRIS P1 TSL 1 (best) BASIC24.54■■□□□ 1.52
TRDV1A0A1B0GX56 ANKRD13D-211ENST00000511455 2139 ntAPPRIS P1 TSL 1 (best) BASIC24.53■■□□□ 1.52
TRDV1A0A1B0GX56 TPRA1-201ENST00000296210 1725 ntTSL 1 (best) BASIC24.53■■□□□ 1.52
TRDV1A0A1B0GX56 GNB5-202ENST00000358784 1735 ntAPPRIS ALT1 TSL 1 (best) BASIC24.53■■□□□ 1.52
TRDV1A0A1B0GX56 INO80B-201ENST00000233331 1261 ntAPPRIS P1 TSL 1 (best) BASIC24.53■■□□□ 1.52
TRDV1A0A1B0GX56 KLHL35-204ENST00000539798 1936 ntAPPRIS P1 TSL 1 (best) BASIC24.52■■□□□ 1.52
TRDV1A0A1B0GX56 CUEDC1-201ENST00000360238 2193 ntAPPRIS P1 TSL 2 BASIC24.52■■□□□ 1.52
TRDV1A0A1B0GX56 ANGPTL6-201ENST00000253109 1900 ntAPPRIS P1 TSL 1 (best) BASIC24.51■■□□□ 1.51
TRDV1A0A1B0GX56 NGB-201ENST00000298352 1884 ntAPPRIS P1 TSL 1 (best) BASIC24.5■■□□□ 1.51
TRDV1A0A1B0GX56 ABCB10P3-201ENST00000561950 2166 ntBASIC24.5■■□□□ 1.51
TRDV1A0A1B0GX56 ARL8A-204ENST00000614750 1727 ntTSL 3 BASIC24.49■■□□□ 1.51
TRDV1A0A1B0GX56 CMTM4-202ENST00000394106 1187 ntAPPRIS P1 TSL 1 (best) BASIC24.48■■□□□ 1.51
TRDV1A0A1B0GX56 CMTM4-204ENST00000563952 1023 ntTSL 1 (best) BASIC24.48■■□□□ 1.51
TRDV1A0A1B0GX56 CCZ1B-215ENST00000626257 2211 ntTSL 2 BASIC24.48■■□□□ 1.51
TRDV1A0A1B0GX56 PPP1CC-202ENST00000340766 1472 ntTSL 2 BASIC24.46■■□□□ 1.51
TRDV1A0A1B0GX56 RCC1L-201ENST00000610322 2300 ntAPPRIS P1 TSL 1 (best) BASIC24.46■■□□□ 1.51
TRDV1A0A1B0GX56 RRAGC-201ENST00000373001 2732 ntAPPRIS P1 TSL 1 (best) BASIC24.46■■□□□ 1.51
TRDV1A0A1B0GX56 PANK2-207ENST00000610179 1807 ntAPPRIS ALT2 TSL 1 (best) BASIC24.45■■□□□ 1.5
TRDV1A0A1B0GX56 RTN2-201ENST00000245923 2293 ntTSL 1 (best) BASIC24.45■■□□□ 1.5
TRDV1A0A1B0GX56 CCM2-218ENST00000541586 1719 ntTSL 3 BASIC24.44■■□□□ 1.5
TRDV1A0A1B0GX56 LTB4R2-204ENST00000533293 1515 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
TRDV1A0A1B0GX56 BIN1-204ENST00000348750 2074 ntTSL 1 (best) BASIC24.42■■□□□ 1.5
TRDV1A0A1B0GX56 TPM2-203ENST00000378292 2147 ntAPPRIS ALT1 TSL 1 (best) BASIC24.42■■□□□ 1.5
TRDV1A0A1B0GX56 ARRDC1-201ENST00000371421 1586 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
TRDV1A0A1B0GX56 FADS3-201ENST00000278829 1779 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
TRDV1A0A1B0GX56 RNF130-205ENST00000521389 2263 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
TRDV1A0A1B0GX56 PQLC1-202ENST00000357575 2475 ntAPPRIS ALT1 TSL 5 BASIC24.4■■□□□ 1.5
TRDV1A0A1B0GX56 FGFRL1-205ENST00000510644 2304 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
TRDV1A0A1B0GX56 TESK1-206ENST00000620767 2438 ntAPPRIS P1 TSL 5 BASIC24.4■■□□□ 1.5
TRDV1A0A1B0GX56 AC120057.4-201ENST00000624722 1615 ntBASIC24.39■■□□□ 1.5
TRDV1A0A1B0GX56 ATRNL1-207ENST00000527407 1583 ntTSL 5 BASIC24.39■■□□□ 1.5
TRDV1A0A1B0GX56 EXOC3L4-201ENST00000380069 2293 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.5
TRDV1A0A1B0GX56 PCYT2-205ENST00000570391 1857 ntTSL 2 BASIC24.38■■□□□ 1.49
TRDV1A0A1B0GX56 UCK1-201ENST00000372208 2063 ntTSL 1 (best) BASIC24.38■■□□□ 1.49
TRDV1A0A1B0GX56 AC105285.1-201ENST00000500914 2036 ntTSL 1 (best) BASIC24.37■■□□□ 1.49
TRDV1A0A1B0GX56 COL13A1-212ENST00000520133 1833 ntTSL 5 BASIC24.37■■□□□ 1.49
TRDV1A0A1B0GX56 MAPK12-201ENST00000215659 1918 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
TRDV1A0A1B0GX56 TPRA1-202ENST00000355552 1933 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
TRDV1A0A1B0GX56 CCND3-203ENST00000372991 2085 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
TRDV1A0A1B0GX56 EXOC3-209ENST00000512944 2825 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
TRDV1A0A1B0GX56 CAPNS1-201ENST00000246533 1918 ntAPPRIS P2 TSL 1 (best) BASIC24.34■■□□□ 1.49
TRDV1A0A1B0GX56 BMP7-202ENST00000395864 1746 ntTSL 5 BASIC24.33■■□□□ 1.49
TRDV1A0A1B0GX56 SHF-206ENST00000560471 2499 ntTSL 5 BASIC24.33■■□□□ 1.48
TRDV1A0A1B0GX56 INO80B-203ENST00000409917 796 ntTSL 2 BASIC24.31■■□□□ 1.48
TRDV1A0A1B0GX56 TRAPPC10-202ENST00000380221 1763 ntTSL 1 (best) BASIC24.31■■□□□ 1.48
TRDV1A0A1B0GX56 GNPTAB-206ENST00000549940 1678 ntTSL 1 (best) BASIC24.3■■□□□ 1.48
TRDV1A0A1B0GX56 MPST-201ENST00000341116 1504 ntAPPRIS P1 TSL 5 BASIC24.3■■□□□ 1.48
TRDV1A0A1B0GX56 ANKRD65-203ENST00000454272 1506 ntAPPRIS P1 TSL 5 BASIC24.29■■□□□ 1.48
TRDV1A0A1B0GX56 CHCHD4-202ENST00000396914 1405 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
TRDV1A0A1B0GX56 GALR3-201ENST00000249041 1157 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
TRDV1A0A1B0GX56 DCBLD1-201ENST00000296955 1979 ntAPPRIS P2 TSL 1 (best) BASIC24.28■■□□□ 1.48
TRDV1A0A1B0GX56 HOXD8-201ENST00000313173 1917 ntAPPRIS P3 TSL 2 BASIC24.27■■□□□ 1.48
TRDV1A0A1B0GX56 CGREF1-203ENST00000402394 1906 ntAPPRIS P2 TSL 2 BASIC24.27■■□□□ 1.48
TRDV1A0A1B0GX56 JUND-201ENST00000252818 1863 ntAPPRIS P1 BASIC24.27■■□□□ 1.48
TRDV1A0A1B0GX56 RCC1L-202ENST00000614461 2419 ntTSL 1 (best) BASIC24.26■■□□□ 1.47
TRDV1A0A1B0GX56 AL357033.3-201ENST00000620143 614 ntTSL 3 BASIC24.26■■□□□ 1.47
TRDV1A0A1B0GX56 PHOX2A-201ENST00000298231 1699 ntAPPRIS P1 TSL 1 (best) BASIC24.26■■□□□ 1.47
TRDV1A0A1B0GX56 SLC2A4RG-201ENST00000266077 1731 ntAPPRIS P1 TSL 1 (best) BASIC24.25■■□□□ 1.47
TRDV1A0A1B0GX56 AC015813.7-201ENST00000623294 581 ntBASIC24.25■■□□□ 1.47
TRDV1A0A1B0GX56 NFKBIA-209ENST00000557389 1537 ntTSL 2 BASIC24.25■■□□□ 1.47
TRDV1A0A1B0GX56 GIPC1-203ENST00000393033 1926 ntAPPRIS P1 TSL 1 (best) BASIC24.23■■□□□ 1.47
TRDV1A0A1B0GX56 TPRA1-209ENST00000489960 1903 ntAPPRIS P1 TSL 5 BASIC24.23■■□□□ 1.47
TRDV1A0A1B0GX56 FZD2-201ENST00000315323 2112 ntAPPRIS P1 BASIC24.23■■□□□ 1.47
TRDV1A0A1B0GX56 HOXB3-207ENST00000472863 1909 ntTSL 2 BASIC24.22■■□□□ 1.47
TRDV1A0A1B0GX56 KCTD17-202ENST00000403888 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC24.21■■□□□ 1.47
TRDV1A0A1B0GX56 AL161658.1-201ENST00000623641 1967 ntBASIC24.2■■□□□ 1.46
TRDV1A0A1B0GX56 COL13A1-210ENST00000517713 2007 ntAPPRIS ALT2 TSL 5 BASIC24.16■■□□□ 1.46
TRDV1A0A1B0GX56 HMX1-201ENST00000400677 1895 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
TRDV1A0A1B0GX56 NEUROG2-201ENST00000313341 2287 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
TRDV1A0A1B0GX56 ABHD12-201ENST00000339157 2117 ntAPPRIS P1 TSL 2 BASIC24.14■■□□□ 1.46
TRDV1A0A1B0GX56 AC139426.1-201ENST00000568218 2529 ntBASIC24.14■■□□□ 1.46
TRDV1A0A1B0GX56 VWA1-201ENST00000338660 2147 ntTSL 2 BASIC24.14■■□□□ 1.45
TRDV1A0A1B0GX56 CD151-202ENST00000397420 1648 ntAPPRIS P2 TSL 1 (best) BASIC24.13■■□□□ 1.45
TRDV1A0A1B0GX56 TMEM80-202ENST00000397512 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC24.13■■□□□ 1.45
TRDV1A0A1B0GX56 DEXI-201ENST00000331808 1561 ntAPPRIS P1 TSL 1 (best) BASIC24.12■■□□□ 1.45
TRDV1A0A1B0GX56 CUL4A-202ENST00000375440 2364 ntAPPRIS P1 TSL 1 (best) BASIC24.11■■□□□ 1.45
TRDV1A0A1B0GX56 TMEM158-201ENST00000503771 1813 ntAPPRIS P1 BASIC24.1■■□□□ 1.45
TRDV1A0A1B0GX56 ARPC5L-202ENST00000353214 2507 ntAPPRIS P1 TSL 2 BASIC24.1■■□□□ 1.45
TRDV1A0A1B0GX56 ZIC2-201ENST00000376335 2983 ntAPPRIS P1 TSL 1 (best) BASIC24.09■■□□□ 1.45
TRDV1A0A1B0GX56 LY6K-202ENST00000518841 855 ntAPPRIS ALT2 TSL 2 BASIC24.08■■□□□ 1.45
TRDV1A0A1B0GX56 GXYLT1-201ENST00000280876 1937 ntAPPRIS ALT2 TSL 1 (best) BASIC24.06■■□□□ 1.44
TRDV1A0A1B0GX56 AMN-201ENST00000299155 1907 ntAPPRIS P2 TSL 1 (best) BASIC24.06■■□□□ 1.44
TRDV1A0A1B0GX56 WDSUB1-205ENST00000409990 1920 ntAPPRIS P1 TSL 2 BASIC24.06■■□□□ 1.44
TRDV1A0A1B0GX56 SECTM1-201ENST00000269389 2235 ntAPPRIS P2 TSL 1 (best) BASIC24.05■■□□□ 1.44
TRDV1A0A1B0GX56 PQLC1-203ENST00000397778 2555 ntAPPRIS P3 TSL 1 (best) BASIC24.03■■□□□ 1.44
Retrieved 100 of 98,524 protein–RNA pairs in 36.5 ms