Protein–RNA interactions for Protein: A0A1B0GX56

TRDV1, T-cell receptor delta variable 1 (Fragment), humanhuman

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRDV1A0A1B0GX56 AC116565.1-201ENST00000610212 2421 ntAPPRIS P1 BASIC29.84■■■□□ 2.37
TRDV1A0A1B0GX56 SEPT3-204ENST00000406029 1866 ntTSL 5 BASIC29.68■■■□□ 2.34
TRDV1A0A1B0GX56 TCF15-201ENST00000246080 1555 ntAPPRIS P1 TSL 1 (best) BASIC29.37■■■□□ 2.29
TRDV1A0A1B0GX56 RAB12-201ENST00000329286 2137 ntAPPRIS P1 TSL 1 (best) BASIC29.02■■■□□ 2.24
TRDV1A0A1B0GX56 HES6-203ENST00000409160 1600 ntTSL 2 BASIC28.98■■■□□ 2.23
TRDV1A0A1B0GX56 FOXD1-202ENST00000615637 2272 ntAPPRIS P1 BASIC28.81■■■□□ 2.2
TRDV1A0A1B0GX56 PPP2CB-201ENST00000221138 2006 ntAPPRIS P1 TSL 1 (best) BASIC28.75■■■□□ 2.19
TRDV1A0A1B0GX56 PRR5-217ENST00000617066 1726 ntTSL 5 BASIC28.66■■■□□ 2.18
TRDV1A0A1B0GX56 FBLL1-201ENST00000338333 1519 ntAPPRIS P1 BASIC28.62■■■□□ 2.17
TRDV1A0A1B0GX56 FBRSL1-201ENST00000434748 5568 ntAPPRIS P2 TSL 1 (best) BASIC28.61■■■□□ 2.17
TRDV1A0A1B0GX56 AL356512.1-201ENST00000607453 1739 ntBASIC28.59■■■□□ 2.17
TRDV1A0A1B0GX56 CYHR1-209ENST00000530374 1870 ntTSL 3 BASIC28.49■■■□□ 2.15
TRDV1A0A1B0GX56 ACOT7-209ENST00000545482 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC28.39■■■□□ 2.14
TRDV1A0A1B0GX56 PRR5-216ENST00000611394 1843 ntTSL 2 BASIC28.27■■■□□ 2.12
TRDV1A0A1B0GX56 CSNK1E-204ENST00000403904 1580 ntAPPRIS P1 TSL 5 BASIC28.24■■■□□ 2.11
TRDV1A0A1B0GX56 FAM149A-205ENST00000502970 1990 ntAPPRIS P2 TSL 5 BASIC28.22■■■□□ 2.11
TRDV1A0A1B0GX56 C11orf63-202ENST00000307257 1964 ntTSL 2 BASIC28.21■■■□□ 2.11
TRDV1A0A1B0GX56 TGIF1-202ENST00000343820 2076 ntAPPRIS P1 TSL 1 (best) BASIC28.17■■■□□ 2.1
TRDV1A0A1B0GX56 KHSRP-213ENST00000619396 2226 ntAPPRIS ALT2 TSL 5 BASIC28.1■■■□□ 2.09
TRDV1A0A1B0GX56 ZNF358-202ENST00000597229 1954 ntAPPRIS P1 TSL 2 BASIC28.01■■■□□ 2.07
TRDV1A0A1B0GX56 AES-202ENST00000327141 1608 ntAPPRIS P1 TSL 1 (best) BASIC27.69■■■□□ 2.02
TRDV1A0A1B0GX56 TRIP10-202ENST00000313285 2035 ntAPPRIS P1 TSL 1 (best) BASIC27.68■■■□□ 2.02
TRDV1A0A1B0GX56 PHF10-201ENST00000339209 1719 ntAPPRIS P4 TSL 1 (best) BASIC27.67■■■□□ 2.02
TRDV1A0A1B0GX56 NECTIN3-201ENST00000319792 1549 ntAPPRIS ALT2 TSL 1 (best) BASIC27.61■■■□□ 2.01
TRDV1A0A1B0GX56 PTF1A-201ENST00000376504 1537 ntAPPRIS P1 TSL 1 (best) BASIC27.45■■□□□ 1.98
TRDV1A0A1B0GX56 PPP1CA-203ENST00000376745 1476 ntAPPRIS P1 TSL 1 (best) BASIC27.35■■□□□ 1.97
TRDV1A0A1B0GX56 INO80B-WBP1-202ENST00000452361 2040 ntAPPRIS P5 TSL 2 BASIC27.34■■□□□ 1.97
TRDV1A0A1B0GX56 MPND-207ENST00000599840 1611 ntAPPRIS ALT2 TSL 5 BASIC27.31■■□□□ 1.96
TRDV1A0A1B0GX56 MAPK3-201ENST00000263025 1861 ntAPPRIS P3 TSL 1 (best) BASIC27.27■■□□□ 1.96
TRDV1A0A1B0GX56 CAPNS1-206ENST00000588815 1471 ntAPPRIS P2 TSL 1 (best) BASIC27.22■■□□□ 1.95
TRDV1A0A1B0GX56 GPI-201ENST00000356487 2210 ntAPPRIS P1 TSL 1 (best) BASIC27.2■■□□□ 1.94
TRDV1A0A1B0GX56 B4GALT2-203ENST00000372324 2203 ntAPPRIS P1 TSL 1 (best) BASIC27.15■■□□□ 1.94
TRDV1A0A1B0GX56 PABPN1-201ENST00000216727 2001 ntAPPRIS P2 TSL 1 (best) BASIC27.11■■□□□ 1.93
TRDV1A0A1B0GX56 C11orf84-201ENST00000294244 2024 ntAPPRIS P1 TSL 1 (best) BASIC27.03■■□□□ 1.92
TRDV1A0A1B0GX56 IFNGR2-201ENST00000290219 2221 ntAPPRIS P3 TSL 1 (best) BASIC26.98■■□□□ 1.91
TRDV1A0A1B0GX56 FEZF2-201ENST00000283268 2074 ntAPPRIS P1 TSL 1 (best) BASIC26.96■■□□□ 1.91
TRDV1A0A1B0GX56 CRIP2-201ENST00000329146 1857 ntAPPRIS P1 TSL 1 (best) BASIC26.95■■□□□ 1.9
TRDV1A0A1B0GX56 FAM149A-215ENST00000514153 2070 ntAPPRIS P2 TSL 5 BASIC26.88■■□□□ 1.89
TRDV1A0A1B0GX56 SLC25A10-203ENST00000545862 1911 ntTSL 1 (best) BASIC26.83■■□□□ 1.89
TRDV1A0A1B0GX56 SSBP3-204ENST00000371320 2077 ntAPPRIS P3 TSL 1 (best) BASIC26.81■■□□□ 1.88
TRDV1A0A1B0GX56 ZFYVE21-201ENST00000216602 1521 ntAPPRIS ALT2 TSL 2 BASIC26.8■■□□□ 1.88
TRDV1A0A1B0GX56 CCM2-219ENST00000544363 1620 ntTSL 3 BASIC26.8■■□□□ 1.88
TRDV1A0A1B0GX56 ADRA1D-201ENST00000379453 2728 ntAPPRIS P1 TSL 1 (best) BASIC26.75■■□□□ 1.87
TRDV1A0A1B0GX56 NT5DC2-203ENST00000459839 1639 ntTSL 1 (best) BASIC26.65■■□□□ 1.86
TRDV1A0A1B0GX56 SULT4A1-201ENST00000330884 2468 ntAPPRIS P1 TSL 1 (best) BASIC26.57■■□□□ 1.84
TRDV1A0A1B0GX56 KIAA2013-203ENST00000616327 2170 ntAPPRIS P1 TSL 5 BASIC26.56■■□□□ 1.84
TRDV1A0A1B0GX56 METRNL-201ENST00000320095 1605 ntAPPRIS P1 TSL 1 (best) BASIC26.52■■□□□ 1.84
TRDV1A0A1B0GX56 MAPK3-202ENST00000322266 1743 ntTSL 5 BASIC26.51■■□□□ 1.83
TRDV1A0A1B0GX56 TPRG1L-201ENST00000344579 2189 ntTSL 1 (best) BASIC26.39■■□□□ 1.82
TRDV1A0A1B0GX56 SERINC2-201ENST00000373709 1997 ntAPPRIS P1 TSL 1 (best) BASIC26.38■■□□□ 1.81
TRDV1A0A1B0GX56 HAPLN2-201ENST00000255039 1771 ntAPPRIS P1 TSL 1 (best) BASIC26.37■■□□□ 1.81
TRDV1A0A1B0GX56 ILK-212ENST00000532063 1617 ntTSL 2 BASIC26.33■■□□□ 1.81
TRDV1A0A1B0GX56 ST7-208ENST00000393451 2110 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.81
TRDV1A0A1B0GX56 POU3F1-201ENST00000373012 2184 ntAPPRIS P1 BASIC26.31■■□□□ 1.8
TRDV1A0A1B0GX56 SDCCAG3-204ENST00000371725 2129 ntAPPRIS ALT2 TSL 5 BASIC26.29■■□□□ 1.8
TRDV1A0A1B0GX56 UBP1-201ENST00000283628 2074 ntAPPRIS P3 TSL 2 BASIC26.27■■□□□ 1.8
TRDV1A0A1B0GX56 TUBB6-201ENST00000317702 2064 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
TRDV1A0A1B0GX56 CSNK1E-205ENST00000405675 2127 ntTSL 5 BASIC26.25■■□□□ 1.79
TRDV1A0A1B0GX56 GRASP-206ENST00000552049 1688 ntTSL 1 (best) BASIC26.21■■□□□ 1.79
TRDV1A0A1B0GX56 PLPPR3-204ENST00000520876 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC26.21■■□□□ 1.79
TRDV1A0A1B0GX56 GIPC1-205ENST00000586027 1386 ntAPPRIS P1 TSL 2 BASIC26.2■■□□□ 1.79
TRDV1A0A1B0GX56 SLC25A28-201ENST00000370495 1451 ntAPPRIS P1 TSL 1 (best) BASIC26.18■■□□□ 1.78
TRDV1A0A1B0GX56 SSSCA1-205ENST00000527920 806 ntTSL 3 BASIC26.16■■□□□ 1.78
TRDV1A0A1B0GX56 LMO2-202ENST00000395833 1687 ntAPPRIS P1 TSL 1 (best) BASIC26.15■■□□□ 1.78
TRDV1A0A1B0GX56 CTDNEP1-208ENST00000573600 1724 ntAPPRIS P1 TSL 5 BASIC26.14■■□□□ 1.77
TRDV1A0A1B0GX56 PWWP2B-202ENST00000631148 2013 ntTSL 5 BASIC26.08■■□□□ 1.77
TRDV1A0A1B0GX56 FEZF2-202ENST00000475839 1918 ntAPPRIS P1 TSL 1 (best) BASIC26.08■■□□□ 1.76
TRDV1A0A1B0GX56 HAGHL-201ENST00000341413 1701 ntTSL 2 BASIC26.07■■□□□ 1.76
TRDV1A0A1B0GX56 NT5DC2-202ENST00000422318 1795 ntAPPRIS ALT2 TSL 5 BASIC26.07■■□□□ 1.76
TRDV1A0A1B0GX56 AGAP1-204ENST00000409457 2165 ntTSL 1 (best) BASIC26.05■■□□□ 1.76
TRDV1A0A1B0GX56 SAMD1-202ENST00000533683 2164 ntAPPRIS P5 TSL 1 (best) BASIC25.99■■□□□ 1.75
TRDV1A0A1B0GX56 ST7-205ENST00000393446 2114 ntTSL 5 BASIC25.98■■□□□ 1.75
TRDV1A0A1B0GX56 TPRG1L-202ENST00000378344 2414 ntAPPRIS P1 TSL 2 BASIC25.98■■□□□ 1.75
TRDV1A0A1B0GX56 MPND-201ENST00000262966 1567 ntAPPRIS P3 TSL 1 (best) BASIC25.98■■□□□ 1.75
TRDV1A0A1B0GX56 SDCCAG3-202ENST00000357365 2304 ntAPPRIS P4 TSL 5 BASIC25.97■■□□□ 1.75
TRDV1A0A1B0GX56 SH3GLB2-201ENST00000372554 1985 ntTSL 1 (best) BASIC25.96■■□□□ 1.75
TRDV1A0A1B0GX56 STK25-202ENST00000401869 2251 ntAPPRIS P1 TSL 1 (best) BASIC25.95■■□□□ 1.75
TRDV1A0A1B0GX56 TFEB-204ENST00000373033 2331 ntAPPRIS P1 TSL 1 (best) BASIC25.94■■□□□ 1.74
TRDV1A0A1B0GX56 NADK2-202ENST00000381937 2243 ntAPPRIS P1 TSL 2 BASIC25.94■■□□□ 1.74
TRDV1A0A1B0GX56 SEPT3-203ENST00000396426 2586 ntAPPRIS P4 TSL 1 (best) BASIC25.92■■□□□ 1.74
TRDV1A0A1B0GX56 ST7-202ENST00000323984 2142 ntTSL 5 BASIC25.91■■□□□ 1.74
TRDV1A0A1B0GX56 ST7-207ENST00000393449 2127 ntTSL 5 BASIC25.91■■□□□ 1.74
TRDV1A0A1B0GX56 OLFM1-208ENST00000392991 1057 ntTSL 2 BASIC25.91■■□□□ 1.74
TRDV1A0A1B0GX56 CHST12-204ENST00000618655 2131 ntAPPRIS P1 TSL 1 (best) BASIC25.91■■□□□ 1.74
TRDV1A0A1B0GX56 AC008105.3-203ENST00000591365 2238 ntTSL 2 BASIC25.87■■□□□ 1.73
TRDV1A0A1B0GX56 NRG3-203ENST00000404547 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC25.87■■□□□ 1.73
TRDV1A0A1B0GX56 CBX4-201ENST00000269397 2664 ntAPPRIS P2 TSL 1 (best) BASIC25.86■■□□□ 1.73
TRDV1A0A1B0GX56 UBE2M-201ENST00000253023 1508 ntAPPRIS P1 TSL 1 (best) BASIC25.86■■□□□ 1.73
TRDV1A0A1B0GX56 C7orf50-202ENST00000397098 2131 ntAPPRIS P2 TSL 1 (best) BASIC25.81■■□□□ 1.72
TRDV1A0A1B0GX56 C11orf68-201ENST00000438576 1619 ntAPPRIS ALT2 TSL 2 BASIC25.81■■□□□ 1.72
TRDV1A0A1B0GX56 FEZF2-203ENST00000486811 2001 ntAPPRIS P1 TSL 5 BASIC25.79■■□□□ 1.72
TRDV1A0A1B0GX56 SLC15A4-201ENST00000266771 2779 ntAPPRIS P1 TSL 1 (best) BASIC25.77■■□□□ 1.72
TRDV1A0A1B0GX56 CSPG5-205ENST00000610462 2073 ntTSL 5 BASIC25.76■■□□□ 1.71
TRDV1A0A1B0GX56 DPP6-204ENST00000406326 2012 ntTSL 1 (best) BASIC25.74■■□□□ 1.71
TRDV1A0A1B0GX56 GRASP-201ENST00000293662 1933 ntAPPRIS P1 TSL 1 (best) BASIC25.73■■□□□ 1.71
TRDV1A0A1B0GX56 SIAH1-203ENST00000394725 2147 ntAPPRIS P3 TSL 1 (best) BASIC25.73■■□□□ 1.71
TRDV1A0A1B0GX56 TXNRD2-204ENST00000400521 2115 ntAPPRIS P2 TSL 1 (best) BASIC25.7■■□□□ 1.71
TRDV1A0A1B0GX56 WSB2-211ENST00000544233 2503 ntTSL 2 BASIC25.68■■□□□ 1.7
TRDV1A0A1B0GX56 CSNK1E-206ENST00000413574 1631 ntTSL 5 BASIC25.63■■□□□ 1.69
TRDV1A0A1B0GX56 CTDNEP1-210ENST00000574322 1708 ntAPPRIS P1 TSL 1 (best) BASIC25.62■■□□□ 1.69
Retrieved 100 of 98,524 protein–RNA pairs in 17.5 ms