Protein–RNA interactions for Protein: Q9NRR3

CDC42SE2, CDC42 small effector protein 2, humanhuman

Predictions only

Length 84 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE2Q9NRR3 LIMCH1-211ENST00000509638 1570 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
CDC42SE2Q9NRR3 SIAH1-203ENST00000394725 2147 ntAPPRIS P3 TSL 1 (best) BASIC19.82■□□□□ 0.76
CDC42SE2Q9NRR3 NT5M-201ENST00000389022 1617 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
CDC42SE2Q9NRR3 CSPG5-205ENST00000610462 2073 ntTSL 5 BASIC19.8■□□□□ 0.76
CDC42SE2Q9NRR3 GRASP-201ENST00000293662 1933 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
CDC42SE2Q9NRR3 GALR3-201ENST00000249041 1157 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
CDC42SE2Q9NRR3 AC008105.3-203ENST00000591365 2238 ntTSL 2 BASIC19.77■□□□□ 0.76
CDC42SE2Q9NRR3 TFEB-204ENST00000373033 2331 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
CDC42SE2Q9NRR3 AL136373.1-201ENST00000634804 1449 ntAPPRIS P1 BASIC19.74■□□□□ 0.75
CDC42SE2Q9NRR3 NRG3-203ENST00000404547 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
CDC42SE2Q9NRR3 PRKAR1B-201ENST00000360274 2007 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
CDC42SE2Q9NRR3 RAB43-207ENST00000476465 1627 ntTSL 3 BASIC19.72■□□□□ 0.75
CDC42SE2Q9NRR3 TPRG1L-202ENST00000378344 2414 ntAPPRIS P1 TSL 2 BASIC19.71■□□□□ 0.75
CDC42SE2Q9NRR3 ARTN-202ENST00000372359 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
CDC42SE2Q9NRR3 AL357033.3-201ENST00000620143 614 ntTSL 3 BASIC19.7■□□□□ 0.74
CDC42SE2Q9NRR3 PDXP-201ENST00000215904 2010 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CDC42SE2Q9NRR3 B4GALT7-201ENST00000029410 1747 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CDC42SE2Q9NRR3 INO80B-203ENST00000409917 796 ntTSL 2 BASIC19.69■□□□□ 0.74
CDC42SE2Q9NRR3 KCNK1-202ENST00000366621 2161 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CDC42SE2Q9NRR3 WSB2-211ENST00000544233 2503 ntTSL 2 BASIC19.68■□□□□ 0.74
CDC42SE2Q9NRR3 FEZF2-202ENST00000475839 1918 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CDC42SE2Q9NRR3 ST7-205ENST00000393446 2114 ntTSL 5 BASIC19.67■□□□□ 0.74
CDC42SE2Q9NRR3 IL1R1-201ENST00000409288 1735 ntTSL 5 BASIC19.67■□□□□ 0.74
CDC42SE2Q9NRR3 FAM19A5-203ENST00000402357 1508 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
CDC42SE2Q9NRR3 HOXB3-208ENST00000476342 1420 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
CDC42SE2Q9NRR3 MTCP1-202ENST00000369476 2274 ntAPPRIS P1 TSL 3 BASIC19.63■□□□□ 0.73
CDC42SE2Q9NRR3 SEPT3-203ENST00000396426 2586 ntAPPRIS P4 TSL 1 (best) BASIC19.62■□□□□ 0.73
CDC42SE2Q9NRR3 ST7-202ENST00000323984 2142 ntTSL 5 BASIC19.62■□□□□ 0.73
CDC42SE2Q9NRR3 ST7-207ENST00000393449 2127 ntTSL 5 BASIC19.62■□□□□ 0.73
CDC42SE2Q9NRR3 SCARA3-202ENST00000337221 1910 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
CDC42SE2Q9NRR3 AKR1E2-201ENST00000298375 1566 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CDC42SE2Q9NRR3 BRF1-213ENST00000548421 1452 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
CDC42SE2Q9NRR3 CERS1-201ENST00000429504 2094 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
CDC42SE2Q9NRR3 AC015813.7-201ENST00000623294 581 ntBASIC19.6■□□□□ 0.73
CDC42SE2Q9NRR3 EMID1-201ENST00000334018 2173 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CDC42SE2Q9NRR3 PPP1R1A-201ENST00000257905 1826 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CDC42SE2Q9NRR3 CBX4-201ENST00000269397 2664 ntAPPRIS P2 TSL 1 (best) BASIC19.58■□□□□ 0.73
CDC42SE2Q9NRR3 SLC15A4-201ENST00000266771 2779 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
CDC42SE2Q9NRR3 EMX1-201ENST00000258106 2188 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
CDC42SE2Q9NRR3 RASSF7-202ENST00000397583 1928 ntAPPRIS P3 TSL 1 (best) BASIC19.56■□□□□ 0.72
CDC42SE2Q9NRR3 DRD4-201ENST00000176183 1375 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
CDC42SE2Q9NRR3 OLFM2-201ENST00000264833 2019 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
CDC42SE2Q9NRR3 TWIST1-201ENST00000242261 1666 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
CDC42SE2Q9NRR3 TXNRD2-204ENST00000400521 2115 ntAPPRIS P2 TSL 1 (best) BASIC19.53■□□□□ 0.72
CDC42SE2Q9NRR3 LFNG-201ENST00000222725 2377 ntAPPRIS P4 TSL 5 BASIC19.52■□□□□ 0.72
CDC42SE2Q9NRR3 ANXA5-201ENST00000296511 1762 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
CDC42SE2Q9NRR3 FAM89B-203ENST00000530349 1263 ntAPPRIS P1 TSL 2 BASIC19.52■□□□□ 0.72
CDC42SE2Q9NRR3 CERS2-201ENST00000271688 2544 ntAPPRIS P1 TSL 5 BASIC19.52■□□□□ 0.71
CDC42SE2Q9NRR3 CCZ1-201ENST00000325974 1802 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
CDC42SE2Q9NRR3 TUSC1-201ENST00000358022 2052 ntAPPRIS P1 BASIC19.51■□□□□ 0.71
CDC42SE2Q9NRR3 KCTD17-201ENST00000402077 1691 ntAPPRIS P3 TSL 1 (best) BASIC19.5■□□□□ 0.71
CDC42SE2Q9NRR3 CDV3-203ENST00000431519 955 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
CDC42SE2Q9NRR3 RNF126-201ENST00000292363 1694 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
CDC42SE2Q9NRR3 PLPPR3-204ENST00000520876 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
CDC42SE2Q9NRR3 CHCHD4-202ENST00000396914 1405 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
CDC42SE2Q9NRR3 CISD3-204ENST00000613478 2074 ntAPPRIS P1 TSL 2 BASIC19.47■□□□□ 0.71
CDC42SE2Q9NRR3 SNTG2-201ENST00000308624 1888 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CDC42SE2Q9NRR3 FMR1-219ENST00000621453 1864 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
CDC42SE2Q9NRR3 TAZ-215ENST00000612460 1793 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CDC42SE2Q9NRR3 ZBTB7A-202ENST00000601588 2083 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CDC42SE2Q9NRR3 CACNG8-202ENST00000638874 1278 ntAPPRIS P2 TSL 1 (best) BASIC19.42■□□□□ 0.7
CDC42SE2Q9NRR3 AC092647.5-201ENST00000426595 1732 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
CDC42SE2Q9NRR3 LMNTD2-201ENST00000329451 2084 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CDC42SE2Q9NRR3 RDX-206ENST00000528900 1814 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
CDC42SE2Q9NRR3 CYP26C1-201ENST00000285949 1569 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CDC42SE2Q9NRR3 DPF1-204ENST00000416611 2341 ntTSL 5 BASIC19.39■□□□□ 0.69
CDC42SE2Q9NRR3 ANKRD65-203ENST00000454272 1506 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.69
CDC42SE2Q9NRR3 RASGEF1C-207ENST00000615330 2268 ntTSL 5 BASIC19.37■□□□□ 0.69
CDC42SE2Q9NRR3 CCM2-201ENST00000258781 1894 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
CDC42SE2Q9NRR3 GLT8D1-201ENST00000266014 1849 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CDC42SE2Q9NRR3 PPP1CC-202ENST00000340766 1472 ntTSL 2 BASIC19.36■□□□□ 0.69
CDC42SE2Q9NRR3 ARRDC1-201ENST00000371421 1586 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CDC42SE2Q9NRR3 KCNF1-201ENST00000295082 2289 ntAPPRIS P1 BASIC19.35■□□□□ 0.69
CDC42SE2Q9NRR3 VPS37D-201ENST00000324941 1624 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CDC42SE2Q9NRR3 ADRA2C-202ENST00000509482 1600 ntTSL 3 BASIC19.34■□□□□ 0.69
CDC42SE2Q9NRR3 E2F4-201ENST00000379378 2096 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CDC42SE2Q9NRR3 GNB5-202ENST00000358784 1735 ntAPPRIS ALT1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CDC42SE2Q9NRR3 BRF1-221ENST00000619151 1530 ntTSL 5 BASIC19.31■□□□□ 0.68
CDC42SE2Q9NRR3 SH3BP2-221ENST00000511747 2351 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
CDC42SE2Q9NRR3 KIAA2013-202ENST00000376576 2539 ntTSL 2 BASIC19.31■□□□□ 0.68
CDC42SE2Q9NRR3 RAMP2-AS1-202ENST00000589716 1985 ntTSL 5 BASIC19.3■□□□□ 0.68
CDC42SE2Q9NRR3 LTB4R2-204ENST00000533293 1515 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CDC42SE2Q9NRR3 ARMC10-211ENST00000541300 2266 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
CDC42SE2Q9NRR3 CBLN1-201ENST00000219197 2435 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CDC42SE2Q9NRR3 FOXD3-201ENST00000371116 2086 ntAPPRIS P1 BASIC19.29■□□□□ 0.68
CDC42SE2Q9NRR3 PCYT2-205ENST00000570391 1857 ntTSL 2 BASIC19.28■□□□□ 0.68
CDC42SE2Q9NRR3 ATRNL1-209ENST00000609571 1818 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
CDC42SE2Q9NRR3 GNAI2-202ENST00000313601 2464 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CDC42SE2Q9NRR3 TRIOBP-205ENST00000407319 2125 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
CDC42SE2Q9NRR3 SATB1-AS1-216ENST00000598149 1119 ntTSL 2 BASIC19.27■□□□□ 0.68
CDC42SE2Q9NRR3 RNF215-203ENST00000382363 1992 ntAPPRIS P2 TSL 1 (best) BASIC19.26■□□□□ 0.67
CDC42SE2Q9NRR3 FAM149A-201ENST00000227065 2708 ntAPPRIS P2 TSL 1 (best) BASIC19.24■□□□□ 0.67
CDC42SE2Q9NRR3 CD151-202ENST00000397420 1648 ntAPPRIS P2 TSL 1 (best) BASIC19.24■□□□□ 0.67
CDC42SE2Q9NRR3 KCNK3-202ENST00000620977 1956 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
CDC42SE2Q9NRR3 TMEM229A-201ENST00000455783 2108 ntAPPRIS P1 BASIC19.24■□□□□ 0.67
CDC42SE2Q9NRR3 FAM89B-202ENST00000449319 1337 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
CDC42SE2Q9NRR3 ANGPTL6-204ENST00000592641 1781 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CDC42SE2Q9NRR3 NRXN1-228ENST00000628364 2444 ntTSL 5 BASIC19.21■□□□□ 0.67
CDC42SE2Q9NRR3 LY6K-202ENST00000518841 855 ntAPPRIS ALT2 TSL 2 BASIC19.2■□□□□ 0.66
CDC42SE2Q9NRR3 SHC2-201ENST00000264554 2494 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 9.5 ms