Protein–RNA interactions for Protein: Q8N1V8

LINC01561, Uncharacterized protein encoded by LINC01561, humanhuman

Predictions only

Length 128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01561Q8N1V8 STK25-202ENST00000401869 2251 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
LINC01561Q8N1V8 LIMCH1-211ENST00000509638 1570 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
LINC01561Q8N1V8 CSPG5-205ENST00000610462 2073 ntTSL 5 BASIC19.29■□□□□ 0.68
LINC01561Q8N1V8 FEZF2-202ENST00000475839 1918 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
LINC01561Q8N1V8 RAB43-207ENST00000476465 1627 ntTSL 3 BASIC19.26■□□□□ 0.67
LINC01561Q8N1V8 INO80B-201ENST00000233331 1261 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
LINC01561Q8N1V8 AC008105.3-203ENST00000591365 2238 ntTSL 2 BASIC19.25■□□□□ 0.67
LINC01561Q8N1V8 NRG3-203ENST00000404547 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
LINC01561Q8N1V8 B4GALT7-201ENST00000029410 1747 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
LINC01561Q8N1V8 CMTM4-202ENST00000394106 1187 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
LINC01561Q8N1V8 CMTM4-204ENST00000563952 1023 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
LINC01561Q8N1V8 PDXP-201ENST00000215904 2010 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
LINC01561Q8N1V8 AKR1E2-201ENST00000298375 1566 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
LINC01561Q8N1V8 AL136373.1-201ENST00000634804 1449 ntAPPRIS P1 BASIC19.2■□□□□ 0.66
LINC01561Q8N1V8 ARTN-202ENST00000372359 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
LINC01561Q8N1V8 SIAH1-203ENST00000394725 2147 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
LINC01561Q8N1V8 IL1R1-201ENST00000409288 1735 ntTSL 5 BASIC19.19■□□□□ 0.66
LINC01561Q8N1V8 PRKAR1B-201ENST00000360274 2007 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
LINC01561Q8N1V8 GALR3-201ENST00000249041 1157 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
LINC01561Q8N1V8 HOXB3-208ENST00000476342 1420 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
LINC01561Q8N1V8 BRF1-213ENST00000548421 1452 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
LINC01561Q8N1V8 PPP1R1A-201ENST00000257905 1826 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
LINC01561Q8N1V8 FAM19A5-203ENST00000402357 1508 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
LINC01561Q8N1V8 SCARA3-202ENST00000337221 1910 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
LINC01561Q8N1V8 ST7-205ENST00000393446 2114 ntTSL 5 BASIC19.12■□□□□ 0.65
LINC01561Q8N1V8 KCNK1-202ENST00000366621 2161 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
LINC01561Q8N1V8 TWIST1-201ENST00000242261 1666 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
LINC01561Q8N1V8 ST7-202ENST00000323984 2142 ntTSL 5 BASIC19.1■□□□□ 0.65
LINC01561Q8N1V8 ST7-207ENST00000393449 2127 ntTSL 5 BASIC19.1■□□□□ 0.65
LINC01561Q8N1V8 CERS1-201ENST00000429504 2094 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
LINC01561Q8N1V8 AL357033.3-201ENST00000620143 614 ntTSL 3 BASIC19.09■□□□□ 0.65
LINC01561Q8N1V8 DRD4-201ENST00000176183 1375 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
LINC01561Q8N1V8 EMX1-201ENST00000258106 2188 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
LINC01561Q8N1V8 AC092647.5-201ENST00000426595 1732 ntAPPRIS P1 TSL 5 BASIC19.07■□□□□ 0.64
LINC01561Q8N1V8 KCTD17-201ENST00000402077 1691 ntAPPRIS P3 TSL 1 (best) BASIC19.07■□□□□ 0.64
LINC01561Q8N1V8 TAZ-215ENST00000612460 1793 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
LINC01561Q8N1V8 TFEB-204ENST00000373033 2331 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
LINC01561Q8N1V8 CCZ1-201ENST00000325974 1802 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
LINC01561Q8N1V8 RNF126-201ENST00000292363 1694 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
LINC01561Q8N1V8 INO80B-203ENST00000409917 796 ntTSL 2 BASIC19.03■□□□□ 0.64
LINC01561Q8N1V8 RASSF7-202ENST00000397583 1928 ntAPPRIS P3 TSL 1 (best) BASIC19.03■□□□□ 0.64
LINC01561Q8N1V8 GGA1-204ENST00000381756 2107 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
LINC01561Q8N1V8 AC015813.7-201ENST00000623294 581 ntBASIC19.02■□□□□ 0.64
LINC01561Q8N1V8 RDX-206ENST00000528900 1814 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
LINC01561Q8N1V8 TXNRD2-204ENST00000400521 2115 ntAPPRIS P2 TSL 1 (best) BASIC19.01■□□□□ 0.63
LINC01561Q8N1V8 MTCP1-202ENST00000369476 2274 ntAPPRIS P1 TSL 3 BASIC19■□□□□ 0.63
LINC01561Q8N1V8 OLFM2-201ENST00000264833 2019 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
LINC01561Q8N1V8 LFNG-201ENST00000222725 2377 ntAPPRIS P4 TSL 5 BASIC18.99■□□□□ 0.63
LINC01561Q8N1V8 TUSC1-201ENST00000358022 2052 ntAPPRIS P1 BASIC18.99■□□□□ 0.63
LINC01561Q8N1V8 EMID1-201ENST00000334018 2173 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
LINC01561Q8N1V8 CBX4-201ENST00000269397 2664 ntAPPRIS P2 TSL 1 (best) BASIC18.98■□□□□ 0.63
LINC01561Q8N1V8 ACTG1-210ENST00000575842 2256 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
LINC01561Q8N1V8 CISD3-204ENST00000613478 2074 ntAPPRIS P1 TSL 2 BASIC18.97■□□□□ 0.63
LINC01561Q8N1V8 ANXA5-201ENST00000296511 1762 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
LINC01561Q8N1V8 FAM89B-203ENST00000530349 1263 ntAPPRIS P1 TSL 2 BASIC18.96■□□□□ 0.63
LINC01561Q8N1V8 FMR1-219ENST00000621453 1864 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
LINC01561Q8N1V8 ADRA2C-202ENST00000509482 1600 ntTSL 3 BASIC18.96■□□□□ 0.63
LINC01561Q8N1V8 SNTG2-201ENST00000308624 1888 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
LINC01561Q8N1V8 CYP26C1-201ENST00000285949 1569 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
LINC01561Q8N1V8 SEPT3-203ENST00000396426 2586 ntAPPRIS P4 TSL 1 (best) BASIC18.95■□□□□ 0.62
LINC01561Q8N1V8 CCM2-201ENST00000258781 1894 ntAPPRIS P3 TSL 1 (best) BASIC18.94■□□□□ 0.62
LINC01561Q8N1V8 LMNTD2-201ENST00000329451 2084 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
LINC01561Q8N1V8 BRF1-221ENST00000619151 1530 ntTSL 5 BASIC18.93■□□□□ 0.62
LINC01561Q8N1V8 CHCHD4-202ENST00000396914 1405 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
LINC01561Q8N1V8 PPP1CC-202ENST00000340766 1472 ntTSL 2 BASIC18.91■□□□□ 0.62
LINC01561Q8N1V8 VPS37D-201ENST00000324941 1624 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
LINC01561Q8N1V8 ATRNL1-209ENST00000609571 1818 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
LINC01561Q8N1V8 ARRDC1-201ENST00000371421 1586 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
LINC01561Q8N1V8 GLT8D1-201ENST00000266014 1849 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
LINC01561Q8N1V8 SHC2-201ENST00000264554 2494 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
LINC01561Q8N1V8 MAFA-201ENST00000333480 2347 ntAPPRIS P1 BASIC18.87■□□□□ 0.61
LINC01561Q8N1V8 WSB2-211ENST00000544233 2503 ntTSL 2 BASIC18.87■□□□□ 0.61
LINC01561Q8N1V8 ANKRD65-203ENST00000454272 1506 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
LINC01561Q8N1V8 LTB4R2-204ENST00000533293 1515 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
LINC01561Q8N1V8 ZBTB7A-202ENST00000601588 2083 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
LINC01561Q8N1V8 RAMP2-AS1-202ENST00000589716 1985 ntTSL 5 BASIC18.83■□□□□ 0.61
LINC01561Q8N1V8 DPF1-204ENST00000416611 2341 ntTSL 5 BASIC18.82■□□□□ 0.6
LINC01561Q8N1V8 FOXD3-201ENST00000371116 2086 ntAPPRIS P1 BASIC18.81■□□□□ 0.6
LINC01561Q8N1V8 TRIOBP-205ENST00000407319 2125 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
LINC01561Q8N1V8 GNB5-202ENST00000358784 1735 ntAPPRIS ALT1 TSL 1 (best) BASIC18.8■□□□□ 0.6
LINC01561Q8N1V8 E2F4-201ENST00000379378 2096 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
LINC01561Q8N1V8 CDV3-203ENST00000431519 955 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
LINC01561Q8N1V8 CERS2-201ENST00000271688 2544 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
LINC01561Q8N1V8 CD151-202ENST00000397420 1648 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
LINC01561Q8N1V8 SLC15A4-201ENST00000266771 2779 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
LINC01561Q8N1V8 KCNK3-202ENST00000620977 1956 ntTSL 1 (best) BASIC18.77■□□□□ 0.59
LINC01561Q8N1V8 ANGPTL6-204ENST00000592641 1781 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
LINC01561Q8N1V8 KCNF1-201ENST00000295082 2289 ntAPPRIS P1 BASIC18.75■□□□□ 0.59
LINC01561Q8N1V8 LY6K-202ENST00000518841 855 ntAPPRIS ALT2 TSL 2 BASIC18.75■□□□□ 0.59
LINC01561Q8N1V8 CACNG8-202ENST00000638874 1278 ntAPPRIS P2 TSL 1 (best) BASIC18.75■□□□□ 0.59
LINC01561Q8N1V8 RNF215-203ENST00000382363 1992 ntAPPRIS P2 TSL 1 (best) BASIC18.75■□□□□ 0.59
LINC01561Q8N1V8 NRXN1-228ENST00000628364 2444 ntTSL 5 BASIC18.73■□□□□ 0.59
LINC01561Q8N1V8 MPST-201ENST00000341116 1504 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
LINC01561Q8N1V8 SATB1-AS1-216ENST00000598149 1119 ntTSL 2 BASIC18.71■□□□□ 0.59
LINC01561Q8N1V8 AGAP3-211ENST00000473312 2039 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
LINC01561Q8N1V8 BCL7B-201ENST00000223368 1975 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
LINC01561Q8N1V8 ARMC10-211ENST00000541300 2266 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
LINC01561Q8N1V8 FAM149A-201ENST00000227065 2708 ntAPPRIS P2 TSL 1 (best) BASIC18.7■□□□□ 0.58
LINC01561Q8N1V8 KIAA2013-202ENST00000376576 2539 ntTSL 2 BASIC18.69■□□□□ 0.58
LINC01561Q8N1V8 NIT1-201ENST00000368007 1749 ntTSL 2 BASIC18.69■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 14.2 ms