RNA–Protein interactions for RNA: ENST00000291565.8

PDXK-201, Transcript of pyridoxal kinase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDXK, Length 7,366 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDXK-201ENST00000291565 AATFQ9NY61 560 aaKnown RBP eCLIP13.53□□□□□ -0.242e-8■■■■■ 118.2
PDXK-201ENST00000291565 UTP3Q9NQZ2 479 aaKnown RBP eCLIP14.69□□□□□ -0.064e-7■■■■■ 115.5
PDXK-201ENST00000291565 SF3B1O75533 1304 aaKnown RBP eCLIP12.27□□□□□ -0.453e-6■■■■■ 110.4
PDXK-201ENST00000291565 TBRG4Q969Z0 631 aaKnown RBP eCLIP12.92□□□□□ -0.344e-6■■■■■ 45.1
PDXK-201ENST00000291565 GPKOWQ92917 476 aaPredicted RBP eCLIP13.44□□□□□ -0.265e-7■■■■■ 43.5
PDXK-201ENST00000291565 EIF4G2P78344 907 aaKnown RBP eCLIP15.96■□□□□ 0.143e-7■■■■■ 43.4
PDXK-201ENST00000291565 G3BP1Q13283 466 aaKnown RBP eCLIP14.69□□□□□ -0.067e-11■■■■■ 39.3
PDXK-201ENST00000291565 DKC1O60832 514 aaKnown RBP eCLIP13.19□□□□□ -0.37e-8■■■■■ 38
PDXK-201ENST00000291565 GTF2F1P35269 517 aaKnown RBP eCLIP14.45□□□□□ -0.14e-7■■■■■ 33.5
PDXK-201ENST00000291565 TARDBPQ13148 414 aaKnown RBP eCLIP12.07□□□□□ -0.488e-7■■■■■ 32.8
PDXK-201ENST00000291565 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP12.66□□□□□ -0.388e-7■■■■■ 32.1
PDXK-201ENST00000291565 SF3A3Q12874 501 aaKnown RBP eCLIP14.14□□□□□ -0.151e-6■■■■■ 29.6
PDXK-201ENST00000291565 TAF15Q92804 592 aaKnown RBP eCLIP10.54□□□□□ -0.721e-7■■■■■ 28.5
PDXK-201ENST00000291565 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP12.53□□□□□ -0.43e-6■■■■■ 26.8
PDXK-201ENST00000291565 AARSP49588 968 aaKnown RBP eCLIP12.98□□□□□ -0.332e-6■■■■□ 26.2
PDXK-201ENST00000291565 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP12.27□□□□□ -0.453e-6■■■■□ 25.3
PDXK-201ENST00000291565 RBM22Q9NW64 420 aaKnown RBP eCLIP12.45□□□□□ -0.425e-8■■■■□ 24.9
PDXK-201ENST00000291565 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP12.67□□□□□ -0.386e-7■■■■□ 24.2
PDXK-201ENST00000291565 SLTMQ9NWH9 1034 aaKnown RBP eCLIP14.33□□□□□ -0.126e-7■■■■□ 23.9
PDXK-201ENST00000291565 UPF1Q92900 1129 aaKnown RBP eCLIP11.84□□□□□ -0.514e-9■■■■□ 23.9
PDXK-201ENST00000291565 SF3B4Q15427 424 aaKnown RBP eCLIP11.56□□□□□ -0.567e-7■■■■□ 23.1
PDXK-201ENST00000291565 XPO5Q9HAV4 1204 aaKnown RBP eCLIP13.21□□□□□ -0.37e-20■■■■□ 22.9
PDXK-201ENST00000291565 RBM15Q96T37 977 aaKnown RBP eCLIP12.86□□□□□ -0.352e-7■■■■□ 22.5
PDXK-201ENST00000291565 SUB1P53999 127 aaKnown RBP eCLIP10.98□□□□□ -0.652e-6■■■■□ 22.4
PDXK-201ENST00000291565 AQRO60306 1485 aaKnown RBP eCLIP13.83□□□□□ -0.27e-7■■■■□ 22.4
PDXK-201ENST00000291565 PCBP2Q15366 365 aaKnown RBP eCLIP12.17□□□□□ -0.461e-6■■■■□ 22.1
PDXK-201ENST00000291565 EWSR1Q01844 656 aaKnown RBP eCLIP10.78□□□□□ -0.681e-6■■■■□ 22
PDXK-201ENST00000291565 SRSF7Q16629 238 aaKnown RBP eCLIP9.99□□□□□ -0.811e-6■■■■□ 22
PDXK-201ENST00000291565 HNRNPCP07910 306 aaKnown RBP eCLIP13.17□□□□□ -0.36e-7■■■■□ 21.5
PDXK-201ENST00000291565 AKAP1Q92667 903 aaKnown RBP eCLIP12.02□□□□□ -0.482e-7■■■■□ 21.4
PDXK-201ENST00000291565 TIAL1Q01085 375 aaKnown RBP eCLIP11.08□□□□□ -0.646e-6■■■■□ 21
PDXK-201ENST00000291565 METAP2P50579 478 aaKnown RBP eCLIP13.97□□□□□ -0.173e-6■■■■□ 20.1
PDXK-201ENST00000291565 TIA1P31483 386 aaKnown RBP eCLIP11.59□□□□□ -0.556e-15■■■■□ 19.9
PDXK-201ENST00000291565 ILF3Q12906 894 aaKnown RBP eCLIP11.9□□□□□ -0.58e-7■■■■□ 19.8
PDXK-201ENST00000291565 EFTUD2Q15029 972 aaKnown RBP eCLIP13.01□□□□□ -0.331e-6■■■■□ 19.7
PDXK-201ENST00000291565 DHX30Q7L2E3 1194 aaKnown RBP eCLIP12.72□□□□□ -0.372e-6■■■■□ 19.5
PDXK-201ENST00000291565 TROVE2P10155 538 aaKnown RBP eCLIP13.45□□□□□ -0.261e-13■■■□□ 18.8
PDXK-201ENST00000291565 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP11.66□□□□□ -0.544e-7■■■□□ 18.6
PDXK-201ENST00000291565 NONOQ15233 471 aaKnown RBP eCLIP13.38□□□□□ -0.278e-7■■■□□ 18
PDXK-201ENST00000291565 NKRFO15226 690 aaKnown RBP eCLIP11.93□□□□□ -0.52e-7■■■□□ 17.6
PDXK-201ENST00000291565 SRSF9Q13242 221 aaKnown RBP eCLIP10.82□□□□□ -0.683e-6■■■□□ 17.2
PDXK-201ENST00000291565 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP9.84□□□□□ -0.831e-9■■■□□ 16.9
PDXK-201ENST00000291565 DDX3XO00571 662 aaKnown RBP eCLIP12.49□□□□□ -0.416e-32■■■□□ 16.9
PDXK-201ENST00000291565 RBFOX2O43251 390 aaKnown RBP eCLIP10.5□□□□□ -0.737e-7■■■□□ 16.6
PDXK-201ENST00000291565 AGGF1Q8N302 714 aaeCLIP12.8□□□□□ -0.361e-6■■■□□ 16.6
PDXK-201ENST00000291565 PRPF4O43172 522 aaKnown RBP eCLIP12.91□□□□□ -0.343e-7■■■□□ 15.8
PDXK-201ENST00000291565 PUM2Q8TB72 1066 aaKnown RBP eCLIP11.83□□□□□ -0.523e-6■■■□□ 15.6
PDXK-201ENST00000291565 FUSP35637 526 aaKnown RBP eCLIP9.46□□□□□ -0.94e-6■■■□□ 15.5
PDXK-201ENST00000291565 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP13.87□□□□□ -0.192e-8■■■□□ 14.9
PDXK-201ENST00000291565 NIPBLQ6KC79 2804 aaeCLIP6.24□□□□□ -1.412e-9■■■□□ 14.8
PDXK-201ENST00000291565 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP12.24□□□□□ -0.456e-6■■■□□ 14.8
PDXK-201ENST00000291565 BUD13Q9BRD0 619 aaKnown RBP eCLIP12.96□□□□□ -0.331e-7■■■□□ 14.6
PDXK-201ENST00000291565 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.3■□□□□ 0.28e-7■■□□□ 14.5
PDXK-201ENST00000291565 DDX24Q9GZR7 859 aaKnown RBP eCLIP14.23□□□□□ -0.137e-7■■□□□ 14.4
PDXK-201ENST00000291565 FXR2P51116 673 aaKnown RBP eCLIP12.47□□□□□ -0.413e-7■■□□□ 14.3
PDXK-201ENST00000291565 SFPQP23246 707 aaKnown RBP eCLIP14.29□□□□□ -0.124e-8■■□□□ 14.2
PDXK-201ENST00000291565 SMNDC1O75940 238 aaKnown RBP eCLIP12.96□□□□□ -0.347e-7■■□□□ 14.2
PDXK-201ENST00000291565 FMR1Q06787 632 aaKnown RBP eCLIP12.95□□□□□ -0.347e-7■■□□□ 13.6
PDXK-201ENST00000291565 PABPC4Q13310 644 aaKnown RBP eCLIP13.28□□□□□ -0.282e-6■■□□□ 13.5
PDXK-201ENST00000291565 PPIGQ13427 754 aaKnown RBP eCLIP11.7□□□□□ -0.545e-7■■□□□ 13.2
PDXK-201ENST00000291565 YBX3P16989 372 aaKnown RBP eCLIP12.37□□□□□ -0.431e-7■■□□□ 12.7
PDXK-201ENST00000291565 LIN28BQ6ZN17 250 aaKnown RBP eCLIP11.37□□□□□ -0.596e-7■■□□□ 12.4
PDXK-201ENST00000291565 DDX51Q8N8A6 666 aaKnown RBP eCLIP11.47□□□□□ -0.574e-6■■□□□ 12.3
PDXK-201ENST00000291565 CDC40O60508 579 aaKnown RBP eCLIP12.24□□□□□ -0.456e-8■■□□□ 11.7
PDXK-201ENST00000291565 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP13.26□□□□□ -0.293e-8■■□□□ 11.5
PDXK-201ENST00000291565 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP12.36□□□□□ -0.439e-7■□□□□ 11.1
PDXK-201ENST00000291565 RPS3P23396 243 aaKnown RBP eCLIP12□□□□□ -0.497e-7■□□□□ 11
PDXK-201ENST00000291565 LARP4Q71RC2 724 aaKnown RBP eCLIP11.46□□□□□ -0.572e-9■□□□□ 10.7
PDXK-201ENST00000291565 HNRNPMP52272 730 aaKnown RBP eCLIP14.92□□□□□ -0.025e-7■□□□□ 10.6
PDXK-201ENST00000291565 SAFBQ15424 915 aaKnown RBP eCLIP14.62□□□□□ -0.071e-8■□□□□ 10.6
PDXK-201ENST00000291565 PCBP1Q15365 356 aaKnown RBP eCLIP11.66□□□□□ -0.542e-6■□□□□ 10.5
PDXK-201ENST00000291565 MTPAPQ9NVV4 582 aaKnown RBP eCLIP12.46□□□□□ -0.412e-6■□□□□ 10.2
PDXK-201ENST00000291565 HNRNPLP14866 589 aaKnown RBP eCLIP12.4□□□□□ -0.426e-29■□□□□ 9.8
PDXK-201ENST00000291565 XRN2Q9H0D6 950 aaKnown RBP eCLIP11.78□□□□□ -0.522e-7■□□□□ 9.8
PDXK-201ENST00000291565 EIF3HO15372 352 aaKnown RBP eCLIP12.93□□□□□ -0.342e-6■□□□□ 9.3
PDXK-201ENST00000291565 PABPN1Q86U42 306 aaKnown RBP eCLIP16.51■□□□□ 0.231e-5■□□□□ 8.6
PDXK-201ENST00000291565 DDX55Q8NHQ9 600 aaKnown RBP eCLIP13.53□□□□□ -0.245e-9■□□□□ 8.5
PDXK-201ENST00000291565 SDAD1Q9NVU7 687 aaKnown RBP eCLIP13.73□□□□□ -0.216e-6■□□□□ 8.2
PDXK-201ENST00000291565 FKBP4Q02790 459 aaKnown RBP eCLIP14.43□□□□□ -0.11e-7■□□□□ 8.1
Retrieved 79 of 79 RNA–protein pairs in 15.5 ms