Protein–RNA interactions for Protein: A0A0B4J245

TRAV12-1, T-cell receptor alpha variable 12-1 (Fragment), humanhuman

Predictions only

Length 112 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV12-1A0A0B4J245 AC116565.1-201ENST00000610212 2421 ntAPPRIS P1 BASIC24.08■■□□□ 1.44
TRAV12-1A0A0B4J245 FBRSL1-201ENST00000434748 5568 ntAPPRIS P2 TSL 1 (best) BASIC23.87■■□□□ 1.41
TRAV12-1A0A0B4J245 SEPT3-204ENST00000406029 1866 ntTSL 5 BASIC23.7■■□□□ 1.39
TRAV12-1A0A0B4J245 RAB12-201ENST00000329286 2137 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
TRAV12-1A0A0B4J245 FOXD1-202ENST00000615637 2272 ntAPPRIS P1 BASIC23.31■■□□□ 1.32
TRAV12-1A0A0B4J245 PPP2CB-201ENST00000221138 2006 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
TRAV12-1A0A0B4J245 TCF15-201ENST00000246080 1555 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
TRAV12-1A0A0B4J245 ACOT7-209ENST00000545482 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC22.92■■□□□ 1.26
TRAV12-1A0A0B4J245 HES6-203ENST00000409160 1600 ntTSL 2 BASIC22.91■■□□□ 1.26
TRAV12-1A0A0B4J245 C11orf63-202ENST00000307257 1964 ntTSL 2 BASIC22.83■■□□□ 1.25
TRAV12-1A0A0B4J245 CYHR1-209ENST00000530374 1870 ntTSL 3 BASIC22.79■■□□□ 1.24
TRAV12-1A0A0B4J245 TGIF1-202ENST00000343820 2076 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
TRAV12-1A0A0B4J245 KHSRP-213ENST00000619396 2226 ntAPPRIS ALT2 TSL 5 BASIC22.64■■□□□ 1.21
TRAV12-1A0A0B4J245 PRR5-217ENST00000617066 1726 ntTSL 5 BASIC22.6■■□□□ 1.21
TRAV12-1A0A0B4J245 FAM149A-205ENST00000502970 1990 ntAPPRIS P2 TSL 5 BASIC22.47■■□□□ 1.19
TRAV12-1A0A0B4J245 FBLL1-201ENST00000338333 1519 ntAPPRIS P1 BASIC22.41■■□□□ 1.18
TRAV12-1A0A0B4J245 AL356512.1-201ENST00000607453 1739 ntBASIC22.36■■□□□ 1.17
TRAV12-1A0A0B4J245 ZNF358-202ENST00000597229 1954 ntAPPRIS P1 TSL 2 BASIC22.31■■□□□ 1.16
TRAV12-1A0A0B4J245 PRR5-216ENST00000611394 1843 ntTSL 2 BASIC22.28■■□□□ 1.16
TRAV12-1A0A0B4J245 TRIP10-202ENST00000313285 2035 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
TRAV12-1A0A0B4J245 GPI-201ENST00000356487 2210 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
TRAV12-1A0A0B4J245 CSNK1E-204ENST00000403904 1580 ntAPPRIS P1 TSL 5 BASIC22.01■■□□□ 1.11
TRAV12-1A0A0B4J245 IFNGR2-201ENST00000290219 2221 ntAPPRIS P3 TSL 1 (best) BASIC21.95■■□□□ 1.1
TRAV12-1A0A0B4J245 INO80B-WBP1-202ENST00000452361 2040 ntAPPRIS P5 TSL 2 BASIC21.92■■□□□ 1.1
TRAV12-1A0A0B4J245 MAPK3-201ENST00000263025 1861 ntAPPRIS P3 TSL 1 (best) BASIC21.88■■□□□ 1.09
TRAV12-1A0A0B4J245 FEZF2-201ENST00000283268 2074 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
TRAV12-1A0A0B4J245 NECTIN3-201ENST00000319792 1549 ntAPPRIS ALT2 TSL 1 (best) BASIC21.8■■□□□ 1.08
TRAV12-1A0A0B4J245 C11orf84-201ENST00000294244 2024 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
TRAV12-1A0A0B4J245 MPND-207ENST00000599840 1611 ntAPPRIS ALT2 TSL 5 BASIC21.66■■□□□ 1.06
TRAV12-1A0A0B4J245 PABPN1-201ENST00000216727 2001 ntAPPRIS P2 TSL 1 (best) BASIC21.65■■□□□ 1.06
TRAV12-1A0A0B4J245 B4GALT2-203ENST00000372324 2203 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
TRAV12-1A0A0B4J245 PHF10-201ENST00000339209 1719 ntAPPRIS P4 TSL 1 (best) BASIC21.62■■□□□ 1.05
TRAV12-1A0A0B4J245 CRIP2-201ENST00000329146 1857 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
TRAV12-1A0A0B4J245 AES-202ENST00000327141 1608 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
TRAV12-1A0A0B4J245 PLPPR3-204ENST00000520876 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC21.54■■□□□ 1.04
TRAV12-1A0A0B4J245 SSBP3-204ENST00000371320 2077 ntAPPRIS P3 TSL 1 (best) BASIC21.52■■□□□ 1.04
TRAV12-1A0A0B4J245 ADRA1D-201ENST00000379453 2728 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
TRAV12-1A0A0B4J245 CAPNS1-206ENST00000588815 1471 ntAPPRIS P2 TSL 1 (best) BASIC21.48■■□□□ 1.03
TRAV12-1A0A0B4J245 PTF1A-201ENST00000376504 1537 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
TRAV12-1A0A0B4J245 SLC25A10-203ENST00000545862 1911 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
TRAV12-1A0A0B4J245 TPRG1L-201ENST00000344579 2189 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
TRAV12-1A0A0B4J245 TNK2-201ENST00000333602 5270 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
TRAV12-1A0A0B4J245 ST7-208ENST00000393451 2110 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
TRAV12-1A0A0B4J245 SULT4A1-201ENST00000330884 2468 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
TRAV12-1A0A0B4J245 POU3F1-201ENST00000373012 2184 ntAPPRIS P1 BASIC21.3■■□□□ 1
TRAV12-1A0A0B4J245 SDCCAG3-204ENST00000371725 2129 ntAPPRIS ALT2 TSL 5 BASIC21.25■□□□□ 0.99
TRAV12-1A0A0B4J245 SERINC2-201ENST00000373709 1997 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
TRAV12-1A0A0B4J245 UBP1-201ENST00000283628 2074 ntAPPRIS P3 TSL 2 BASIC21.22■□□□□ 0.99
TRAV12-1A0A0B4J245 FEZF2-202ENST00000475839 1918 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
TRAV12-1A0A0B4J245 FAM149A-215ENST00000514153 2070 ntAPPRIS P2 TSL 5 BASIC21.17■□□□□ 0.98
TRAV12-1A0A0B4J245 KIAA2013-203ENST00000616327 2170 ntAPPRIS P1 TSL 5 BASIC21.15■□□□□ 0.98
TRAV12-1A0A0B4J245 CCM2-219ENST00000544363 1620 ntTSL 3 BASIC21.15■□□□□ 0.98
TRAV12-1A0A0B4J245 PPP1CA-203ENST00000376745 1476 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
TRAV12-1A0A0B4J245 MAPK3-202ENST00000322266 1743 ntTSL 5 BASIC21.1■□□□□ 0.97
TRAV12-1A0A0B4J245 TUBB6-201ENST00000317702 2064 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
TRAV12-1A0A0B4J245 ST7-205ENST00000393446 2114 ntTSL 5 BASIC21.02■□□□□ 0.96
TRAV12-1A0A0B4J245 TPRG1L-202ENST00000378344 2414 ntAPPRIS P1 TSL 2 BASIC21.02■□□□□ 0.95
TRAV12-1A0A0B4J245 ST7-202ENST00000323984 2142 ntTSL 5 BASIC21■□□□□ 0.95
TRAV12-1A0A0B4J245 ST7-207ENST00000393449 2127 ntTSL 5 BASIC21■□□□□ 0.95
TRAV12-1A0A0B4J245 SEPT3-203ENST00000396426 2586 ntAPPRIS P4 TSL 1 (best) BASIC20.94■□□□□ 0.94
TRAV12-1A0A0B4J245 GRASP-206ENST00000552049 1688 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
TRAV12-1A0A0B4J245 CBX4-201ENST00000269397 2664 ntAPPRIS P2 TSL 1 (best) BASIC20.88■□□□□ 0.93
TRAV12-1A0A0B4J245 HAPLN2-201ENST00000255039 1771 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
TRAV12-1A0A0B4J245 HAGHL-201ENST00000341413 1701 ntTSL 2 BASIC20.87■□□□□ 0.93
TRAV12-1A0A0B4J245 CSNK1E-205ENST00000405675 2127 ntTSL 5 BASIC20.87■□□□□ 0.93
TRAV12-1A0A0B4J245 NRG3-203ENST00000404547 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
TRAV12-1A0A0B4J245 TFEB-204ENST00000373033 2331 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
TRAV12-1A0A0B4J245 METRNL-201ENST00000320095 1605 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
TRAV12-1A0A0B4J245 ILK-212ENST00000532063 1617 ntTSL 2 BASIC20.85■□□□□ 0.93
TRAV12-1A0A0B4J245 ZFYVE21-201ENST00000216602 1521 ntAPPRIS ALT2 TSL 2 BASIC20.83■□□□□ 0.93
TRAV12-1A0A0B4J245 NT5DC2-203ENST00000459839 1639 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
TRAV12-1A0A0B4J245 AC008105.3-203ENST00000591365 2238 ntTSL 2 BASIC20.83■□□□□ 0.93
TRAV12-1A0A0B4J245 GGA1-204ENST00000381756 2107 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
TRAV12-1A0A0B4J245 CTDNEP1-208ENST00000573600 1724 ntAPPRIS P1 TSL 5 BASIC20.78■□□□□ 0.92
TRAV12-1A0A0B4J245 ACTG1-210ENST00000575842 2256 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
TRAV12-1A0A0B4J245 TXNRD2-204ENST00000400521 2115 ntAPPRIS P2 TSL 1 (best) BASIC20.76■□□□□ 0.91
TRAV12-1A0A0B4J245 SH3GLB2-201ENST00000372554 1985 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
TRAV12-1A0A0B4J245 KCNF1-201ENST00000295082 2289 ntAPPRIS P1 BASIC20.74■□□□□ 0.91
TRAV12-1A0A0B4J245 SAMD1-202ENST00000533683 2164 ntAPPRIS P5 TSL 1 (best) BASIC20.73■□□□□ 0.91
TRAV12-1A0A0B4J245 SLC15A4-201ENST00000266771 2779 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
TRAV12-1A0A0B4J245 LMO2-202ENST00000395833 1687 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
TRAV12-1A0A0B4J245 CHST12-204ENST00000618655 2131 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
TRAV12-1A0A0B4J245 AGAP1-204ENST00000409457 2165 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
TRAV12-1A0A0B4J245 STK25-202ENST00000401869 2251 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
TRAV12-1A0A0B4J245 SDCCAG3-202ENST00000357365 2304 ntAPPRIS P4 TSL 5 BASIC20.65■□□□□ 0.9
TRAV12-1A0A0B4J245 LFNG-201ENST00000222725 2377 ntAPPRIS P4 TSL 5 BASIC20.65■□□□□ 0.9
TRAV12-1A0A0B4J245 GRASP-201ENST00000293662 1933 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
TRAV12-1A0A0B4J245 NADK2-202ENST00000381937 2243 ntAPPRIS P1 TSL 2 BASIC20.62■□□□□ 0.89
TRAV12-1A0A0B4J245 KIAA2013-202ENST00000376576 2539 ntTSL 2 BASIC20.62■□□□□ 0.89
TRAV12-1A0A0B4J245 CSPG5-205ENST00000610462 2073 ntTSL 5 BASIC20.62■□□□□ 0.89
TRAV12-1A0A0B4J245 C11orf68-201ENST00000438576 1619 ntAPPRIS ALT2 TSL 2 BASIC20.61■□□□□ 0.89
TRAV12-1A0A0B4J245 C7orf50-202ENST00000397098 2131 ntAPPRIS P2 TSL 1 (best) BASIC20.6■□□□□ 0.89
TRAV12-1A0A0B4J245 CERS1-201ENST00000429504 2094 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
TRAV12-1A0A0B4J245 SIAH1-203ENST00000394725 2147 ntAPPRIS P3 TSL 1 (best) BASIC20.53■□□□□ 0.88
TRAV12-1A0A0B4J245 FAM149A-201ENST00000227065 2708 ntAPPRIS P2 TSL 1 (best) BASIC20.53■□□□□ 0.88
TRAV12-1A0A0B4J245 WSB2-211ENST00000544233 2503 ntTSL 2 BASIC20.51■□□□□ 0.87
TRAV12-1A0A0B4J245 PDXP-201ENST00000215904 2010 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
TRAV12-1A0A0B4J245 SH3BP2-221ENST00000511747 2351 ntAPPRIS P3 TSL 1 (best) BASIC20.5■□□□□ 0.87
TRAV12-1A0A0B4J245 SNX24-201ENST00000261369 2158 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
TRAV12-1A0A0B4J245 TAZ-215ENST00000612460 1793 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 13.8 ms