Protein–RNA interactions for Protein: Q9Y6C5

PTCH2, Protein patched homolog 2, humanhuman

Predictions only

Length 1,203 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH2Q9Y6C5 SLC2A4RG-201ENST00000266077 1731 ntAPPRIS P1 TSL 1 (best) BASIC30.05■■■□□ 2.4
PTCH2Q9Y6C5 TMEM251-202ENST00000415050 1303 ntTSL 2 BASIC30.05■■■□□ 2.4
PTCH2Q9Y6C5 AP002884.3-203ENST00000419895 1711 ntTSL 2 BASIC30.05■■■□□ 2.4
PTCH2Q9Y6C5 C2orf88-204ENST00000409870 1441 ntAPPRIS P1 TSL 2 BASIC30.05■■■□□ 2.4
PTCH2Q9Y6C5 IL1R1-201ENST00000409288 1735 ntTSL 5 BASIC30.04■■■□□ 2.4
PTCH2Q9Y6C5 BATF3-201ENST00000243440 980 ntAPPRIS P1 TSL 1 (best) BASIC30.03■■■□□ 2.4
PTCH2Q9Y6C5 PXMP2-201ENST00000317479 957 ntAPPRIS P1 TSL 1 (best) BASIC30.03■■■□□ 2.4
PTCH2Q9Y6C5 TSR3-201ENST00000007390 1243 ntAPPRIS P1 TSL 1 (best) BASIC30.03■■■□□ 2.4
PTCH2Q9Y6C5 LINC02323-201ENST00000559946 1603 ntTSL 3 BASIC30.03■■■□□ 2.4
PTCH2Q9Y6C5 BAX-202ENST00000345358 793 ntAPPRIS P1 TSL 1 (best) BASIC30.01■■■□□ 2.39
PTCH2Q9Y6C5 ANKRD16-201ENST00000191063 1567 ntTSL 3 BASIC30.01■■■□□ 2.39
PTCH2Q9Y6C5 MYLIP-202ENST00000356840 1666 ntAPPRIS P1 TSL 1 (best) BASIC30.01■■■□□ 2.39
PTCH2Q9Y6C5 SURF1-201ENST00000371974 1093 ntAPPRIS P1 TSL 1 (best) BASIC29.99■■■□□ 2.39
PTCH2Q9Y6C5 TMEM114-202ENST00000568335 899 ntTSL 3 BASIC29.99■■■□□ 2.39
PTCH2Q9Y6C5 SURF1-205ENST00000615505 991 ntTSL 1 (best) BASIC29.99■■■□□ 2.39
PTCH2Q9Y6C5 C1orf232-201ENST00000634842 643 ntAPPRIS P5 TSL 5 BASIC29.99■■■□□ 2.39
PTCH2Q9Y6C5 HES4-202ENST00000428771 1040 ntTSL 2 BASIC29.98■■■□□ 2.39
PTCH2Q9Y6C5 NPW-202ENST00000566435 991 ntAPPRIS ALT2 TSL 1 (best) BASIC29.98■■■□□ 2.39
PTCH2Q9Y6C5 SMDT1-201ENST00000331479 1567 ntAPPRIS P1 TSL 1 (best) BASIC29.98■■■□□ 2.39
PTCH2Q9Y6C5 PLEKHG6-206ENST00000536531 1683 ntTSL 1 (best) BASIC29.98■■■□□ 2.39
PTCH2Q9Y6C5 BOK-AS1-201ENST00000434306 643 ntTSL 1 (best) BASIC29.96■■■□□ 2.39
PTCH2Q9Y6C5 MAZ-208ENST00000563402 1461 ntTSL 5 BASIC29.95■■■□□ 2.39
PTCH2Q9Y6C5 MAZ-210ENST00000566906 1455 ntTSL 5 BASIC29.95■■■□□ 2.39
PTCH2Q9Y6C5 HOXB3-207ENST00000472863 1909 ntTSL 2 BASIC29.95■■■□□ 2.39
PTCH2Q9Y6C5 AL590677.1-201ENST00000438431 380 ntTSL 5 BASIC29.94■■■□□ 2.38
PTCH2Q9Y6C5 TRIM52-AS1-202ENST00000507434 672 ntTSL 1 (best) BASIC29.93■■■□□ 2.38
PTCH2Q9Y6C5 FAM189B-210ENST00000621094 1335 ntTSL 1 (best) BASIC29.93■■■□□ 2.38
PTCH2Q9Y6C5 PXMP2-205ENST00000543589 632 ntTSL 3 BASIC29.92■■■□□ 2.38
PTCH2Q9Y6C5 U85056.1-201ENST00000616429 682 ntBASIC29.92■■■□□ 2.38
PTCH2Q9Y6C5 MDFIC-203ENST00000423503 474 ntTSL 1 (best) BASIC29.91■■■□□ 2.38
PTCH2Q9Y6C5 NOG-201ENST00000332822 1892 ntAPPRIS P1 BASIC29.91■■■□□ 2.38
PTCH2Q9Y6C5 RPARP-AS1-205ENST00000596045 431 ntTSL 3 BASIC29.9■■■□□ 2.38
PTCH2Q9Y6C5 TAF10-201ENST00000299424 1215 ntAPPRIS P1 TSL 1 (best) BASIC29.88■■■□□ 2.37
PTCH2Q9Y6C5 LINC00273-201ENST00000539813 1452 ntBASIC29.87■■■□□ 2.37
PTCH2Q9Y6C5 QDPR-208ENST00000513615 1188 ntTSL 2 BASIC29.87■■■□□ 2.37
PTCH2Q9Y6C5 GFER-205ENST00000569451 517 ntTSL 5 BASIC29.87■■■□□ 2.37
PTCH2Q9Y6C5 C16orf74-204ENST00000602719 1002 ntAPPRIS ALT2 TSL 3 BASIC29.87■■■□□ 2.37
PTCH2Q9Y6C5 SDCCAG3-204ENST00000371725 2129 ntAPPRIS ALT2 TSL 5 BASIC29.87■■■□□ 2.37
PTCH2Q9Y6C5 TNFRSF4-201ENST00000379236 1068 ntAPPRIS P1 TSL 1 (best) BASIC29.86■■■□□ 2.37
PTCH2Q9Y6C5 RNF215-203ENST00000382363 1992 ntAPPRIS P2 TSL 1 (best) BASIC29.86■■■□□ 2.37
PTCH2Q9Y6C5 LINC01770-201ENST00000417917 634 ntTSL 2 BASIC29.85■■■□□ 2.37
PTCH2Q9Y6C5 LINC01896-206ENST00000575722 1256 ntTSL 2 BASIC29.85■■■□□ 2.37
PTCH2Q9Y6C5 C14orf80-202ENST00000334656 1358 ntAPPRIS ALT2 TSL 2 BASIC29.85■■■□□ 2.37
PTCH2Q9Y6C5 HYI-213ENST00000583037 1322 ntTSL 5 BASIC29.84■■■□□ 2.37
PTCH2Q9Y6C5 TSPAN11-203ENST00000545802 1649 ntTSL 1 (best) BASIC29.84■■■□□ 2.37
PTCH2Q9Y6C5 RARRES2P1-201ENST00000474487 481 ntBASIC29.81■■■□□ 2.36
PTCH2Q9Y6C5 MZT2B-201ENST00000281871 933 ntAPPRIS P3 TSL 1 (best) BASIC29.8■■■□□ 2.36
PTCH2Q9Y6C5 PDF-201ENST00000288022 1158 ntAPPRIS P1 TSL 1 (best) BASIC29.8■■■□□ 2.36
PTCH2Q9Y6C5 MZT2A-201ENST00000309451 624 ntAPPRIS P1 TSL 1 (best) BASIC29.8■■■□□ 2.36
PTCH2Q9Y6C5 GKAP1-202ENST00000376365 1511 ntTSL 1 (best) BASIC29.8■■■□□ 2.36
PTCH2Q9Y6C5 TSPAN4-207ENST00000397411 1025 ntAPPRIS P1 TSL 2 BASIC29.79■■■□□ 2.36
PTCH2Q9Y6C5 HNRNPAB-206ENST00000506339 1747 ntAPPRIS ALT2 TSL 5 BASIC29.79■■■□□ 2.36
PTCH2Q9Y6C5 LSM7-201ENST00000252622 529 ntAPPRIS P1 TSL 1 (best) BASIC29.78■■■□□ 2.36
PTCH2Q9Y6C5 TSPY13P-201ENST00000338964 914 ntBASIC29.78■■■□□ 2.36
PTCH2Q9Y6C5 CCDC37-AS1-202ENST00000506660 986 ntTSL 1 (best) BASIC29.78■■■□□ 2.36
PTCH2Q9Y6C5 JMJD8-202ENST00000562111 823 ntTSL 2 BASIC29.78■■■□□ 2.36
PTCH2Q9Y6C5 KLHL21-203ENST00000463043 667 ntTSL 5 BASIC29.77■■■□□ 2.36
PTCH2Q9Y6C5 PRRX2-201ENST00000372469 1311 ntAPPRIS P1 TSL 1 (best) BASIC29.76■■■□□ 2.36
PTCH2Q9Y6C5 C20orf24-203ENST00000373852 1059 ntTSL 1 (best) BASIC29.76■■■□□ 2.35
PTCH2Q9Y6C5 DPP6-204ENST00000406326 2012 ntTSL 1 (best) BASIC29.76■■■□□ 2.35
PTCH2Q9Y6C5 TMEM147-202ENST00000392204 935 ntTSL 2 BASIC29.75■■■□□ 2.35
PTCH2Q9Y6C5 AC004987.1-201ENST00000428627 508 ntBASIC29.75■■■□□ 2.35
PTCH2Q9Y6C5 NPTXR-202ENST00000640136 1503 ntAPPRIS P2 TSL 1 (best) BASIC29.74■■■□□ 2.35
PTCH2Q9Y6C5 SSBP3-204ENST00000371320 2077 ntAPPRIS P3 TSL 1 (best) BASIC29.73■■■□□ 2.35
PTCH2Q9Y6C5 RASGEF1C-207ENST00000615330 2268 ntTSL 5 BASIC29.73■■■□□ 2.35
PTCH2Q9Y6C5 MMP28-203ENST00000612672 1092 ntTSL 1 (best) BASIC29.72■■■□□ 2.35
PTCH2Q9Y6C5 BTBD19-201ENST00000409335 1214 ntTSL 5 BASIC29.71■■■□□ 2.35
PTCH2Q9Y6C5 ATP5G2P3-201ENST00000429083 425 ntBASIC29.71■■■□□ 2.35
PTCH2Q9Y6C5 AC138207.2-201ENST00000583377 492 ntTSL 2 BASIC29.71■■■□□ 2.35
PTCH2Q9Y6C5 AC078883.1-202ENST00000450443 1397 ntTSL 3 BASIC29.71■■■□□ 2.35
PTCH2Q9Y6C5 ATRNL1-207ENST00000527407 1583 ntTSL 5 BASIC29.71■■■□□ 2.35
PTCH2Q9Y6C5 ADRA2C-202ENST00000509482 1600 ntTSL 3 BASIC29.71■■■□□ 2.35
PTCH2Q9Y6C5 KRT18P60-201ENST00000312876 1297 ntBASIC29.7■■■□□ 2.35
PTCH2Q9Y6C5 GUK1-208ENST00000366728 842 ntTSL 2 BASIC29.69■■■□□ 2.34
PTCH2Q9Y6C5 HOXD-AS2-201ENST00000426965 927 ntTSL 1 (best) BASIC29.69■■■□□ 2.34
PTCH2Q9Y6C5 DSG2-202ENST00000585206 1081 ntTSL 2 BASIC29.69■■■□□ 2.34
PTCH2Q9Y6C5 RAB4B-203ENST00000594800 1173 ntAPPRIS P1 TSL 5 BASIC29.68■■■□□ 2.34
PTCH2Q9Y6C5 COPZ2-210ENST00000621465 895 ntAPPRIS P1 TSL 1 (best) BASIC29.67■■■□□ 2.34
PTCH2Q9Y6C5 CTSZ-201ENST00000217131 1495 ntAPPRIS P1 TSL 1 (best) BASIC29.67■■■□□ 2.34
PTCH2Q9Y6C5 NADK2-202ENST00000381937 2243 ntAPPRIS P1 TSL 2 BASIC29.66■■■□□ 2.34
PTCH2Q9Y6C5 FGF13-AS1-202ENST00000446383 584 ntTSL 3 BASIC29.66■■■□□ 2.34
PTCH2Q9Y6C5 AC060814.1-201ENST00000554326 538 ntBASIC29.66■■■□□ 2.34
PTCH2Q9Y6C5 HOMER3-207ENST00000594794 903 ntTSL 5 BASIC29.66■■■□□ 2.34
PTCH2Q9Y6C5 GLRB-203ENST00000509282 1757 ntAPPRIS P1 TSL 1 (best) BASIC29.66■■■□□ 2.34
PTCH2Q9Y6C5 YBX2-201ENST00000007699 1590 ntAPPRIS P1 TSL 1 (best) BASIC29.65■■■□□ 2.34
PTCH2Q9Y6C5 ATOH7-201ENST00000373673 1480 ntAPPRIS P1 BASIC29.65■■■□□ 2.34
PTCH2Q9Y6C5 CCM2-201ENST00000258781 1894 ntAPPRIS P3 TSL 1 (best) BASIC29.65■■■□□ 2.34
PTCH2Q9Y6C5 BARX1-201ENST00000253968 1533 ntAPPRIS P1 TSL 1 (best) BASIC29.65■■■□□ 2.34
PTCH2Q9Y6C5 XKR6-201ENST00000297303 1550 ntTSL 1 (best) BASIC29.64■■■□□ 2.34
PTCH2Q9Y6C5 LAGE3-201ENST00000357360 949 ntAPPRIS P1 TSL 1 (best) BASIC29.64■■■□□ 2.34
PTCH2Q9Y6C5 MCCD1-201ENST00000376191 955 ntAPPRIS P1 TSL 1 (best) BASIC29.64■■■□□ 2.34
PTCH2Q9Y6C5 UPF3A-209ENST00000492270 494 ntTSL 2 BASIC29.64■■■□□ 2.34
PTCH2Q9Y6C5 CAPNS1-201ENST00000246533 1918 ntAPPRIS P2 TSL 1 (best) BASIC29.64■■■□□ 2.34
PTCH2Q9Y6C5 NOP53-201ENST00000246802 1528 ntAPPRIS P1 TSL 1 (best) BASIC29.64■■■□□ 2.34
PTCH2Q9Y6C5 PMS1-220ENST00000618056 1468 ntTSL 5 BASIC29.63■■■□□ 2.33
PTCH2Q9Y6C5 LYSMD2-202ENST00000454181 1228 ntTSL 1 (best) BASIC29.63■■■□□ 2.33
PTCH2Q9Y6C5 CFAP73-201ENST00000335621 1514 ntAPPRIS P1 TSL 5 BASIC29.62■■■□□ 2.33
PTCH2Q9Y6C5 ZBTB12-201ENST00000375527 1875 ntAPPRIS P1 TSL 1 (best) BASIC29.62■■■□□ 2.33
PTCH2Q9Y6C5 CHST11-203ENST00000547956 936 ntTSL 2 BASIC29.62■■■□□ 2.33
PTCH2Q9Y6C5 SDCCAG3-202ENST00000357365 2304 ntAPPRIS P4 TSL 5 BASIC29.61■■■□□ 2.33
Retrieved 100 of 98,524 protein–RNA pairs in 39.5 ms