RNA–Protein interactions for RNA: ENST00000317479.7

PXMP2-201, Transcript of peroxisomal membrane protein 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PXMP2, Length 957 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PXMP2-201ENST00000317479 NISCHQ9Y2I1 1504 aa61.03■■■■■ 7.36
PXMP2-201ENST00000317479 CCDC180Q9P1Z9 1646 aa54.56■■■■■ 6.33
PXMP2-201ENST00000317479 ABCC9O60706 1549 aa54.08■■■■■ 6.25
PXMP2-201ENST00000317479 RB1CC1Q8TDY2 1594 aa51.69■■■■■ 5.86
PXMP2-201ENST00000317479 NACADO15069 1562 aa51.43■■■■■ 5.82
PXMP2-201ENST00000317479 DCAF8L2P0C7V8 631 aa51.37■■■■■ 5.81
PXMP2-201ENST00000317479 MYO15BQ96JP2 1530 aa50.84■■■■■ 5.73
PXMP2-201ENST00000317479 ZCCHC6Q5VYS8 1495 aaKnown RBP50.7■■■■■ 5.71
PXMP2-201ENST00000317479 UNC13AQ9UPW8 1703 aa50.56■■■■■ 5.68
PXMP2-201ENST00000317479 PABPN1Q86U42 306 aaKnown RBP eCLIP50.43■■■■■ 5.66
PXMP2-201ENST00000317479 DCAF1Q9Y4B6 1507 aa50.41■■■■■ 5.66
PXMP2-201ENST00000317479 DNAJC5BQ9UF47 199 aa50.19■■■■■ 5.63
PXMP2-201ENST00000317479 BICRAQ9NZM4 1560 aa50.14■■■■■ 5.62
PXMP2-201ENST00000317479 SCRIBQ14160 1630 aa49.81■■■■■ 5.56
PXMP2-201ENST00000317479 SHROOM4Q9ULL8 1493 aa49.47■■■■■ 5.51
PXMP2-201ENST00000317479 EIF4G1Q04637 1599 aaKnown RBP48.89■■■■■ 5.42
PXMP2-201ENST00000317479 CC2D2AQ9P2K1 1620 aa48.87■■■■■ 5.41
PXMP2-201ENST00000317479 CECR2Q9BXF3 1484 aa48.63■■■■■ 5.38
PXMP2-201ENST00000317479 SMARCA4P51532 1647 aa47.53■■■■■ 5.2
PXMP2-201ENST00000317479 NCAPD3P42695 1498 aa47.45■■■■■ 5.19
PXMP2-201ENST00000317479 ATAD2BQ9ULI0 1458 aa47.4■■■■■ 5.18
PXMP2-201ENST00000317479 BAZ1AQ9NRL2 1556 aaPredicted RBP47.36■■■■■ 5.17
PXMP2-201ENST00000317479 SMARCA2P51531 1590 aa47.32■■■■■ 5.17
PXMP2-201ENST00000317479 HMGXB3Q12766 1538 aa47.17■■■■■ 5.14
PXMP2-201ENST00000317479 MROH2BQ7Z745 1585 aa47.06■■■■■ 5.12
PXMP2-201ENST00000317479 BAZ1BQ9UIG0 1483 aaKnown RBP47.02■■■■■ 5.12
PXMP2-201ENST00000317479 PEG3Q9GZU2 1588 aa47.01■■■■■ 5.12
PXMP2-201ENST00000317479 ERCC6Q03468 1493 aa46.66■■■■■ 5.06
PXMP2-201ENST00000317479 NESP48681 1621 aa46.61■■■■■ 5.05
PXMP2-201ENST00000317479 WIZO95785 1651 aa46.56■■■■■ 5.04
PXMP2-201ENST00000317479 LAMC3Q9Y6N6 1575 aa46.34■■■■■ 5.01
PXMP2-201ENST00000317479 CUX2O14529 1486 aa46.33■■■■■ 5.01
PXMP2-201ENST00000317479 RSF1Q96T23 1441 aaPredicted RBP46.26■■■■■ 5
PXMP2-201ENST00000317479 KIF21AQ7Z4S6 1674 aa46.05■■■■■ 4.96
PXMP2-201ENST00000317479 CADPSQ9ULU8 1353 aa46.05■■■■■ 4.96
PXMP2-201ENST00000317479 PDS5BQ9NTI5 1447 aa46.03■■■■■ 4.96
PXMP2-201ENST00000317479 THOC2Q8NI27 1593 aaKnown RBP46.01■■■■■ 4.96
PXMP2-201ENST00000317479 TOP2AP11388 1531 aaKnown RBP45.98■■■■■ 4.95
PXMP2-201ENST00000317479 DNAJC5Q9H3Z4 198 aa45.68■■■■■ 4.9
PXMP2-201ENST00000317479 CFTRP13569 1480 aa45.63■■■■■ 4.9
PXMP2-201ENST00000317479 MRC2Q9UBG0 1479 aa45.63■■■■■ 4.9
PXMP2-201ENST00000317479 CEP164Q9UPV0 1460 aa45.57■■■■■ 4.89
PXMP2-201ENST00000317479 FANCD2Q9BXW9 1451 aa45.56■■■■■ 4.88
PXMP2-201ENST00000317479 WDR62O43379 1518 aa45.5■■■■■ 4.87
PXMP2-201ENST00000317479 CCDC88BA6NC98 1476 aa45.44■■■■■ 4.87
PXMP2-201ENST00000317479 PRDM2Q13029 1718 aa45.3■■■■■ 4.84
PXMP2-201ENST00000317479 URB2Q14146 1524 aaKnown RBP45.15■■■■■ 4.82
PXMP2-201ENST00000317479 TOPBP1Q92547 1522 aa44.75■■■■■ 4.76
PXMP2-201ENST00000317479 SUPT5HO00267 1087 aaKnown RBP44.68■■■■■ 4.74
PXMP2-201ENST00000317479 ABCC8Q09428 1581 aa44.66■■■■■ 4.74
PXMP2-201ENST00000317479 DNMBPQ6XZF7 1577 aa44.65■■■■■ 4.74
PXMP2-201ENST00000317479 IFT140Q96RY7 1462 aa44.61■■■■■ 4.73
PXMP2-201ENST00000317479 ZNF608Q9ULD9 1512 aaPredicted RBP44.51■■■■■ 4.72
PXMP2-201ENST00000317479 POLA1P09884 1462 aaPredicted RBP44.34■■■■■ 4.69
PXMP2-201ENST00000317479 TARBP1Q13395 1621 aaKnown RBP44.32■■■■■ 4.69
PXMP2-201ENST00000317479 EIF4G3O43432 1585 aaKnown RBP44.32■■■■■ 4.69
PXMP2-201ENST00000317479 OSCARQ8IYS5 282 aa44.31■■■■■ 4.68
PXMP2-201ENST00000317479 CUX1P39880 1505 aa44.19■■■■■ 4.66
PXMP2-201ENST00000317479 AQRO60306 1485 aaKnown RBP eCLIP44.18■■■■■ 4.66
PXMP2-201ENST00000317479 RAD54L2Q9Y4B4 1467 aa44.18■■■■■ 4.66
PXMP2-201ENST00000317479 FGD5Q6ZNL6 1462 aa44.15■■■■■ 4.66
PXMP2-201ENST00000317479 SOGA1O94964 1423 aa44.14■■■■■ 4.66
PXMP2-201ENST00000317479 TRIM41Q8WV44 630 aa44.01■■■■■ 4.64
PXMP2-201ENST00000317479 TDRD9Q8NDG6 1382 aaKnown RBP43.99■■■■■ 4.63
PXMP2-201ENST00000317479 CHD1O14646 1710 aa43.92■■■■■ 4.62
PXMP2-201ENST00000317479 WDR97A6NE52 1622 aa43.88■■■■■ 4.61
PXMP2-201ENST00000317479 FBLN2P98095 1184 aa43.83■■■■■ 4.61
PXMP2-201ENST00000317479 SNAPC4Q5SXM2 1469 aa43.76■■■■■ 4.6
PXMP2-201ENST00000317479 RIMBP3CA6NJZ7 1639 aa43.73■■■■■ 4.59
PXMP2-201ENST00000317479 RIMBP3BA6NNM3 1639 aa43.73■■■■■ 4.59
PXMP2-201ENST00000317479 RIMBP3Q9UFD9 1639 aa43.73■■■■■ 4.59
PXMP2-201ENST00000317479 GRIN2BQ13224 1484 aa43.7■■■■■ 4.59
PXMP2-201ENST00000317479 WRNQ14191 1432 aaPredicted RBP eCLIP43.65■■■■■ 4.58
PXMP2-201ENST00000317479 ABCA10Q8WWZ4 1543 aa43.64■■■■■ 4.58
PXMP2-201ENST00000317479 ARHGEF11O15085 1522 aa43.63■■■■■ 4.58
PXMP2-201ENST00000317479 BIVM-ERCC5R4GMW8 1640 aa43.63■■■■■ 4.58
PXMP2-201ENST00000317479 MAGI1Q96QZ7 1491 aaPredicted RBP43.63■■■■■ 4.57
PXMP2-201ENST00000317479 TOP2BQ02880 1626 aa43.62■■■■■ 4.57
PXMP2-201ENST00000317479 PBRM1Q86U86 1689 aa43.62■■■■■ 4.57
PXMP2-201ENST00000317479 GAPVD1Q14C86 1478 aa43.62■■■■■ 4.57
PXMP2-201ENST00000317479 SYNJ1O43426 1573 aa43.62■■■■■ 4.57
PXMP2-201ENST00000317479 ABCA5Q8WWZ7 1642 aa43.56■■■■■ 4.56
PXMP2-201ENST00000317479 CHMP7Q8WUX9 453 aaPredicted RBP43.55■■■■■ 4.56
PXMP2-201ENST00000317479 SYNJ2O15056 1496 aa43.49■■■■■ 4.55
PXMP2-201ENST00000317479 CLASP1Q7Z460 1538 aa43.37■■■■■ 4.53
PXMP2-201ENST00000317479 CYB5RLQ6IPT4 315 aa43.28■■■■■ 4.52
PXMP2-201ENST00000317479 ARAP1Q96P48 1450 aa43.23■■■■■ 4.51
PXMP2-201ENST00000317479 ADAMTS12P58397 1594 aa43.2■■■■■ 4.51
PXMP2-201ENST00000317479 GRIN2AQ12879 1464 aa43.14■■■■■ 4.5
PXMP2-201ENST00000317479 ERICH3Q5RHP9 1530 aa43.11■■■■■ 4.49
PXMP2-201ENST00000317479 FHAD1B1AJZ9 1412 aa43.07■■■■■ 4.49
PXMP2-201ENST00000317479 CEP170Q5SW79 1584 aa42.98■■■■■ 4.47
PXMP2-201ENST00000317479 NUP160Q12769 1436 aa42.94■■■■■ 4.46
PXMP2-201ENST00000317479 KIF27Q86VH2 1401 aa42.78■■■■■ 4.44
PXMP2-201ENST00000317479 ERCC6L2Q5T890 1561 aa42.77■■■■■ 4.44
PXMP2-201ENST00000317479 SHROOM2Q13796 1616 aa42.72■■■■■ 4.43
PXMP2-201ENST00000317479 IGF1RP08069 1367 aa42.66■■■■■ 4.42
PXMP2-201ENST00000317479 TRHP20396 242 aaPredicted RBP42.66■■■■■ 4.42
PXMP2-201ENST00000317479 CUL7Q14999 1698 aa42.63■■■■■ 4.41
PXMP2-201ENST00000317479 RUSC2Q8N2Y8 1516 aa42.59■■■■■ 4.41
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms