RNA–Protein interactions for RNA: ENST00000569451.1

GFER-205, Transcript of growth factor, augmenter of liver regeneration, humanhuman

TSL 5 BASIC

Gene GFER, Length 517 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GFER-205ENST00000569451 NISCHQ9Y2I1 1504 aa60.6■■■■■ 7.29
GFER-205ENST00000569451 CCDC180Q9P1Z9 1646 aa54.38■■■■■ 6.3
GFER-205ENST00000569451 ABCC9O60706 1549 aa54.2■■■■■ 6.27
GFER-205ENST00000569451 RB1CC1Q8TDY2 1594 aa51.63■■■■■ 5.86
GFER-205ENST00000569451 NACADO15069 1562 aa51.29■■■■■ 5.8
GFER-205ENST00000569451 DCAF8L2P0C7V8 631 aa50.96■■■■■ 5.75
GFER-205ENST00000569451 DNAJC5BQ9UF47 199 aa50.69■■■■■ 5.71
GFER-205ENST00000569451 UNC13AQ9UPW8 1703 aa50.67■■■■■ 5.7
GFER-205ENST00000569451 MYO15BQ96JP2 1530 aa50.61■■■■■ 5.69
GFER-205ENST00000569451 PABPN1Q86U42 306 aaKnown RBP eCLIP50.42■■■■■ 5.66
GFER-205ENST00000569451 ZCCHC6Q5VYS8 1495 aaKnown RBP50.29■■■■■ 5.64
GFER-205ENST00000569451 BICRAQ9NZM4 1560 aa50.21■■■■■ 5.63
GFER-205ENST00000569451 DCAF1Q9Y4B6 1507 aa50.03■■■■■ 5.6
GFER-205ENST00000569451 SCRIBQ14160 1630 aa49.59■■■■■ 5.53
GFER-205ENST00000569451 SHROOM4Q9ULL8 1493 aa49.4■■■■■ 5.5
GFER-205ENST00000569451 CC2D2AQ9P2K1 1620 aa49.01■■■■■ 5.44
GFER-205ENST00000569451 EIF4G1Q04637 1599 aaKnown RBP48.93■■■■■ 5.42
GFER-205ENST00000569451 CECR2Q9BXF3 1484 aa48.77■■■■■ 5.4
GFER-205ENST00000569451 NCAPD3P42695 1498 aa47.33■■■■■ 5.17
GFER-205ENST00000569451 SMARCA4P51532 1647 aa47.3■■■■■ 5.16
GFER-205ENST00000569451 ATAD2BQ9ULI0 1458 aa47.24■■■■■ 5.15
GFER-205ENST00000569451 SMARCA2P51531 1590 aa47.1■■■■■ 5.13
GFER-205ENST00000569451 HMGXB3Q12766 1538 aa47.05■■■■■ 5.12
GFER-205ENST00000569451 BAZ1AQ9NRL2 1556 aaPredicted RBP47.02■■■■■ 5.12
GFER-205ENST00000569451 PEG3Q9GZU2 1588 aa46.81■■■■■ 5.08
GFER-205ENST00000569451 BAZ1BQ9UIG0 1483 aaKnown RBP46.79■■■■■ 5.08
GFER-205ENST00000569451 MROH2BQ7Z745 1585 aa46.74■■■■■ 5.07
GFER-205ENST00000569451 ERCC6Q03468 1493 aa46.72■■■■■ 5.07
GFER-205ENST00000569451 NESP48681 1621 aa46.64■■■■■ 5.06
GFER-205ENST00000569451 CUX2O14529 1486 aa46.59■■■■■ 5.05
GFER-205ENST00000569451 DNAJC5Q9H3Z4 198 aa46.33■■■■■ 5.01
GFER-205ENST00000569451 LAMC3Q9Y6N6 1575 aa46.29■■■■■ 5
GFER-205ENST00000569451 WIZO95785 1651 aa46.24■■■■■ 4.99
GFER-205ENST00000569451 THOC2Q8NI27 1593 aaKnown RBP46.18■■■■■ 4.98
GFER-205ENST00000569451 KIF21AQ7Z4S6 1674 aa46.13■■■■■ 4.97
GFER-205ENST00000569451 PDS5BQ9NTI5 1447 aa45.92■■■■■ 4.94
GFER-205ENST00000569451 CADPSQ9ULU8 1353 aa45.87■■■■■ 4.93
GFER-205ENST00000569451 RSF1Q96T23 1441 aaPredicted RBP45.77■■■■■ 4.92
GFER-205ENST00000569451 TOP2AP11388 1531 aaKnown RBP45.6■■■■■ 4.89
GFER-205ENST00000569451 MRC2Q9UBG0 1479 aa45.6■■■■■ 4.89
GFER-205ENST00000569451 WDR62O43379 1518 aa45.52■■■■■ 4.88
GFER-205ENST00000569451 CEP164Q9UPV0 1460 aa45.44■■■■■ 4.87
GFER-205ENST00000569451 CFTRP13569 1480 aa45.42■■■■■ 4.86
GFER-205ENST00000569451 FANCD2Q9BXW9 1451 aa45.41■■■■■ 4.86
GFER-205ENST00000569451 PRDM2Q13029 1718 aa45.16■■■■■ 4.82
GFER-205ENST00000569451 URB2Q14146 1524 aaKnown RBP45.07■■■■■ 4.81
GFER-205ENST00000569451 CCDC88BA6NC98 1476 aa45.05■■■■■ 4.8
GFER-205ENST00000569451 TOPBP1Q92547 1522 aa44.6■■■■■ 4.73
GFER-205ENST00000569451 IFT140Q96RY7 1462 aa44.5■■■■■ 4.71
GFER-205ENST00000569451 ZNF608Q9ULD9 1512 aaPredicted RBP44.5■■■■■ 4.71
GFER-205ENST00000569451 DNMBPQ6XZF7 1577 aa44.45■■■■■ 4.71
GFER-205ENST00000569451 ABCC8Q09428 1581 aa44.4■■■■■ 4.7
GFER-205ENST00000569451 TRIM41Q8WV44 630 aa44.4■■■■■ 4.7
GFER-205ENST00000569451 OSCARQ8IYS5 282 aa44.39■■■■■ 4.7
GFER-205ENST00000569451 EIF4G3O43432 1585 aaKnown RBP44.31■■■■■ 4.68
GFER-205ENST00000569451 TARBP1Q13395 1621 aaKnown RBP44.24■■■■■ 4.67
GFER-205ENST00000569451 POLA1P09884 1462 aaPredicted RBP44.15■■■■■ 4.66
GFER-205ENST00000569451 AQRO60306 1485 aaKnown RBP eCLIP44.07■■■■■ 4.65
GFER-205ENST00000569451 RIMBP3CA6NJZ7 1639 aa44.01■■■■■ 4.64
GFER-205ENST00000569451 RIMBP3BA6NNM3 1639 aa44.01■■■■■ 4.64
GFER-205ENST00000569451 RIMBP3Q9UFD9 1639 aa44.01■■■■■ 4.64
GFER-205ENST00000569451 CHD1O14646 1710 aa44■■■■■ 4.63
GFER-205ENST00000569451 RAD54L2Q9Y4B4 1467 aa43.99■■■■■ 4.63
GFER-205ENST00000569451 SUPT5HO00267 1087 aaKnown RBP43.96■■■■■ 4.63
GFER-205ENST00000569451 CUX1P39880 1505 aa43.91■■■■■ 4.62
GFER-205ENST00000569451 FGD5Q6ZNL6 1462 aa43.9■■■■■ 4.62
GFER-205ENST00000569451 SOGA1O94964 1423 aa43.87■■■■■ 4.61
GFER-205ENST00000569451 ARHGEF11O15085 1522 aa43.83■■■■■ 4.61
GFER-205ENST00000569451 TDRD9Q8NDG6 1382 aaKnown RBP43.8■■■■■ 4.6
GFER-205ENST00000569451 WDR97A6NE52 1622 aa43.72■■■■■ 4.59
GFER-205ENST00000569451 SNAPC4Q5SXM2 1469 aa43.65■■■■■ 4.58
GFER-205ENST00000569451 FBLN2P98095 1184 aa43.65■■■■■ 4.58
GFER-205ENST00000569451 PBRM1Q86U86 1689 aa43.5■■■■■ 4.55
GFER-205ENST00000569451 GRIN2BQ13224 1484 aa43.49■■■■■ 4.55
GFER-205ENST00000569451 MAGI1Q96QZ7 1491 aaPredicted RBP43.49■■■■■ 4.55
GFER-205ENST00000569451 ARAP1Q96P48 1450 aa43.43■■■■■ 4.54
GFER-205ENST00000569451 CLASP1Q7Z460 1538 aa43.43■■■■■ 4.54
GFER-205ENST00000569451 CYB5RLQ6IPT4 315 aa43.39■■■■■ 4.54
GFER-205ENST00000569451 ABCA5Q8WWZ7 1642 aa43.39■■■■■ 4.54
GFER-205ENST00000569451 GAPVD1Q14C86 1478 aa43.38■■■■■ 4.53
GFER-205ENST00000569451 ABCA10Q8WWZ4 1543 aa43.38■■■■■ 4.53
GFER-205ENST00000569451 SYNJ1O43426 1573 aa43.35■■■■■ 4.53
GFER-205ENST00000569451 SYNJ2O15056 1496 aa43.34■■■■■ 4.53
GFER-205ENST00000569451 CHMP7Q8WUX9 453 aaPredicted RBP43.33■■■■■ 4.53
GFER-205ENST00000569451 BIVM-ERCC5R4GMW8 1640 aa43.29■■■■■ 4.52
GFER-205ENST00000569451 TOP2BQ02880 1626 aa43.23■■■■■ 4.51
GFER-205ENST00000569451 WRNQ14191 1432 aaPredicted RBP eCLIP43.16■■■■■ 4.5
GFER-205ENST00000569451 ADAMTS12P58397 1594 aa43.05■■■■■ 4.48
GFER-205ENST00000569451 GRIN2AQ12879 1464 aa42.98■■■■■ 4.47
GFER-205ENST00000569451 CEP170Q5SW79 1584 aa42.89■■■■■ 4.46
GFER-205ENST00000569451 ERICH3Q5RHP9 1530 aa42.83■■■■■ 4.45
GFER-205ENST00000569451 TRHP20396 242 aaPredicted RBP42.83■■■■■ 4.45
GFER-205ENST00000569451 NUP160Q12769 1436 aa42.82■■■■■ 4.45
GFER-205ENST00000569451 ERCC6L2Q5T890 1561 aa42.81■■■■■ 4.44
GFER-205ENST00000569451 FHAD1B1AJZ9 1412 aa42.8■■■■■ 4.44
GFER-205ENST00000569451 SHROOM2Q13796 1616 aa42.69■■■■■ 4.42
GFER-205ENST00000569451 RUSC2Q8N2Y8 1516 aa42.45■■■■■ 4.39
GFER-205ENST00000569451 PRG4Q92954 1404 aaPredicted RBP42.36■■■■■ 4.37
GFER-205ENST00000569451 KIF27Q86VH2 1401 aa42.29■■■■■ 4.36
GFER-205ENST00000569451 CUL7Q14999 1698 aa42.28■■■■■ 4.36
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms