Protein–RNA interactions for Protein: Q9Y6C5

PTCH2, Protein patched homolog 2, humanhuman

Predictions only

Length 1,203 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH2Q9Y6C5 SSSCA1-205ENST00000527920 806 ntTSL 3 BASIC39.78■■■■□ 3.96
PTCH2Q9Y6C5 FBLL1-201ENST00000338333 1519 ntAPPRIS P1 BASIC39.64■■■■□ 3.94
PTCH2Q9Y6C5 HRAS-203ENST00000397596 1100 ntAPPRIS P1 TSL 3 BASIC39.33■■■■□ 3.89
PTCH2Q9Y6C5 PPP1CA-203ENST00000376745 1476 ntAPPRIS P1 TSL 1 (best) BASIC38.74■■■■□ 3.79
PTCH2Q9Y6C5 AES-202ENST00000327141 1608 ntAPPRIS P1 TSL 1 (best) BASIC38.3■■■■□ 3.72
PTCH2Q9Y6C5 CACNG8-202ENST00000638874 1278 ntAPPRIS P2 TSL 1 (best) BASIC38.12■■■■□ 3.69
PTCH2Q9Y6C5 ANKRD60-201ENST00000457363 1038 ntAPPRIS P1 TSL 5 BASIC38.06■■■■□ 3.68
PTCH2Q9Y6C5 CDV3-203ENST00000431519 955 ntTSL 1 (best) BASIC37.98■■■■□ 3.67
PTCH2Q9Y6C5 PPP2CB-204ENST00000518564 691 ntTSL 3 BASIC37.95■■■■□ 3.67
PTCH2Q9Y6C5 CSNK1E-204ENST00000403904 1580 ntAPPRIS P1 TSL 5 BASIC37.89■■■■□ 3.66
PTCH2Q9Y6C5 ALYREF-202ENST00000505490 1088 ntAPPRIS P1 TSL 1 (best) BASIC37.67■■■■□ 3.62
PTCH2Q9Y6C5 TAF5L-202ENST00000366674 492 ntTSL 3 BASIC37.59■■■■□ 3.61
PTCH2Q9Y6C5 OLFM1-208ENST00000392991 1057 ntTSL 2 BASIC37.51■■■■□ 3.6
PTCH2Q9Y6C5 AL356512.1-201ENST00000607453 1739 ntBASIC37.45■■■■□ 3.59
PTCH2Q9Y6C5 TCF15-201ENST00000246080 1555 ntAPPRIS P1 TSL 1 (best) BASIC37.39■■■■□ 3.58
PTCH2Q9Y6C5 GALR3-201ENST00000249041 1157 ntAPPRIS P1 TSL 1 (best) BASIC37.39■■■■□ 3.58
PTCH2Q9Y6C5 MAF-203ENST00000569649 1217 ntAPPRIS ALT2 TSL 5 BASIC37.05■■■■□ 3.52
PTCH2Q9Y6C5 MPND-201ENST00000262966 1567 ntAPPRIS P3 TSL 1 (best) BASIC36.98■■■■□ 3.51
PTCH2Q9Y6C5 CYBA-201ENST00000261623 797 ntAPPRIS P1 TSL 1 (best) BASIC36.91■■■■□ 3.5
PTCH2Q9Y6C5 ZFYVE21-201ENST00000216602 1521 ntAPPRIS ALT2 TSL 2 BASIC36.89■■■■□ 3.5
PTCH2Q9Y6C5 CMTM4-202ENST00000394106 1187 ntAPPRIS P1 TSL 1 (best) BASIC36.87■■■■□ 3.49
PTCH2Q9Y6C5 CMTM4-204ENST00000563952 1023 ntTSL 1 (best) BASIC36.87■■■■□ 3.49
PTCH2Q9Y6C5 FAM89B-203ENST00000530349 1263 ntAPPRIS P1 TSL 2 BASIC36.83■■■■□ 3.49
PTCH2Q9Y6C5 AL357033.3-201ENST00000620143 614 ntTSL 3 BASIC36.83■■■■□ 3.49
PTCH2Q9Y6C5 INO80B-201ENST00000233331 1261 ntAPPRIS P1 TSL 1 (best) BASIC36.66■■■■□ 3.46
PTCH2Q9Y6C5 PHF10-201ENST00000339209 1719 ntAPPRIS P4 TSL 1 (best) BASIC36.62■■■■□ 3.45
PTCH2Q9Y6C5 INO80B-203ENST00000409917 796 ntTSL 2 BASIC36.59■■■■□ 3.45
PTCH2Q9Y6C5 ZNRF2P1-201ENST00000441407 443 ntBASIC36.48■■■■□ 3.43
PTCH2Q9Y6C5 AC006077.2-201ENST00000623591 457 ntBASIC36.39■■■■□ 3.42
PTCH2Q9Y6C5 ARTN-201ENST00000372354 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC36.29■■■■□ 3.4
PTCH2Q9Y6C5 AC008738.5-201ENST00000587312 482 ntTSL 3 BASIC36.29■■■■□ 3.4
PTCH2Q9Y6C5 GIPC1-205ENST00000586027 1386 ntAPPRIS P1 TSL 2 BASIC36.28■■■■□ 3.4
PTCH2Q9Y6C5 SATB1-AS1-216ENST00000598149 1119 ntTSL 2 BASIC36.02■■■■□ 3.36
PTCH2Q9Y6C5 PRELID2-202ENST00000394450 1102 ntTSL 1 (best) BASIC35.98■■■■□ 3.35
PTCH2Q9Y6C5 AC015813.7-201ENST00000623294 581 ntBASIC35.91■■■■□ 3.34
PTCH2Q9Y6C5 PTF1A-201ENST00000376504 1537 ntAPPRIS P1 TSL 1 (best) BASIC35.76■■■■□ 3.31
PTCH2Q9Y6C5 HES6-203ENST00000409160 1600 ntTSL 2 BASIC35.68■■■■□ 3.3
PTCH2Q9Y6C5 AP002365.1-201ENST00000603448 772 ntBASIC35.56■■■■□ 3.28
PTCH2Q9Y6C5 HMGB1-205ENST00000399494 1282 ntAPPRIS P1 TSL 2 BASIC35.48■■■■□ 3.27
PTCH2Q9Y6C5 PRR5-217ENST00000617066 1726 ntTSL 5 BASIC35.46■■■■□ 3.27
PTCH2Q9Y6C5 SLC25A28-201ENST00000370495 1451 ntAPPRIS P1 TSL 1 (best) BASIC35.44■■■■□ 3.26
PTCH2Q9Y6C5 FAM89B-202ENST00000449319 1337 ntTSL 1 (best) BASIC35.38■■■■□ 3.25
PTCH2Q9Y6C5 PRR5-216ENST00000611394 1843 ntTSL 2 BASIC35.36■■■■□ 3.25
PTCH2Q9Y6C5 MBD2-202ENST00000398398 1237 ntTSL 2 BASIC35.32■■■■□ 3.24
PTCH2Q9Y6C5 MBD2-205ENST00000583046 1182 ntTSL 1 (best) BASIC35.32■■■■□ 3.24
PTCH2Q9Y6C5 H2AFV-202ENST00000308153 752 ntAPPRIS P4 TSL 1 (best) BASIC35.27■■■■□ 3.24
PTCH2Q9Y6C5 FAM58A-202ENST00000440428 1164 ntAPPRIS P2 TSL 2 BASIC35.27■■■■□ 3.24
PTCH2Q9Y6C5 CLEC3B-201ENST00000296130 936 ntAPPRIS P1 TSL 1 (best) BASIC35.24■■■■□ 3.23
PTCH2Q9Y6C5 CSNK1E-206ENST00000413574 1631 ntTSL 5 BASIC35.23■■■■□ 3.23
PTCH2Q9Y6C5 ARTN-211ENST00000498139 1303 ntAPPRIS P4 TSL 1 (best) BASIC35.12■■■■□ 3.21
PTCH2Q9Y6C5 PQLC1-211ENST00000590381 1247 ntTSL 2 BASIC35.1■■■■□ 3.21
PTCH2Q9Y6C5 AL355297.4-201ENST00000603191 1249 ntTSL 3 BASIC35.08■■■■□ 3.21
PTCH2Q9Y6C5 C11orf68-202ENST00000449692 1559 ntAPPRIS P3 TSL 1 (best) BASIC35.04■■■■□ 3.2
PTCH2Q9Y6C5 AC079848.1-201ENST00000511301 327 ntTSL 3 BASIC35.03■■■■□ 3.2
PTCH2Q9Y6C5 HAGHL-201ENST00000341413 1701 ntTSL 2 BASIC35.01■■■■□ 3.2
PTCH2Q9Y6C5 CBX4-202ENST00000448310 718 ntAPPRIS ALT2 TSL 3 BASIC34.99■■■■□ 3.19
PTCH2Q9Y6C5 FGF2-203ENST00000614010 867 ntTSL 1 (best) BASIC34.98■■■■□ 3.19
PTCH2Q9Y6C5 AC005524.1-203ENST00000586528 451 ntTSL 3 BASIC34.9■■■■□ 3.18
PTCH2Q9Y6C5 NKX1-1-201ENST00000422806 1236 ntAPPRIS P1 TSL 5 BASIC34.89■■■■□ 3.18
PTCH2Q9Y6C5 MAP6D1-202ENST00000431348 890 ntAPPRIS ALT2 TSL 2 BASIC34.86■■■■□ 3.17
PTCH2Q9Y6C5 UBE2M-201ENST00000253023 1508 ntAPPRIS P1 TSL 1 (best) BASIC34.86■■■■□ 3.17
PTCH2Q9Y6C5 SYNGR1-202ENST00000318801 1361 ntTSL 1 (best) BASIC34.8■■■■□ 3.16
PTCH2Q9Y6C5 NKAIN4-203ENST00000370316 1430 ntAPPRIS P1 TSL 1 (best) BASIC34.79■■■■□ 3.16
PTCH2Q9Y6C5 INAFM1-201ENST00000552360 1255 ntAPPRIS P1 BASIC34.76■■■■□ 3.16
PTCH2Q9Y6C5 NT5DC2-203ENST00000459839 1639 ntTSL 1 (best) BASIC34.72■■■■□ 3.15
PTCH2Q9Y6C5 HRH3-201ENST00000317393 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC34.68■■■■□ 3.14
PTCH2Q9Y6C5 MSANTD3-203ENST00000395067 1362 ntAPPRIS P1 TSL 1 (best) BASIC34.67■■■■□ 3.14
PTCH2Q9Y6C5 ARTN-204ENST00000438616 889 ntTSL 1 (best) BASIC34.67■■■■□ 3.14
PTCH2Q9Y6C5 LINC01578-201ENST00000553829 732 ntTSL 2 BASIC34.64■■■■□ 3.14
PTCH2Q9Y6C5 NRGN-201ENST00000284292 1306 ntAPPRIS P1 TSL 1 (best) BASIC34.62■■■■□ 3.13
PTCH2Q9Y6C5 AP001107.7-201ENST00000533287 272 ntTSL 2 BASIC34.62■■■■□ 3.13
PTCH2Q9Y6C5 CAPNS1-217ENST00000629983 799 ntTSL 5 BASIC34.6■■■■□ 3.13
PTCH2Q9Y6C5 DYNLL1-207ENST00000549989 719 ntAPPRIS P1 TSL 1 (best) BASIC34.5■■■■□ 3.11
PTCH2Q9Y6C5 DYNLL1-208ENST00000550178 581 ntBASIC34.5■■■■□ 3.11
PTCH2Q9Y6C5 GSTZ1-201ENST00000216465 1338 ntAPPRIS P2 TSL 1 (best) BASIC34.44■■■■□ 3.1
PTCH2Q9Y6C5 LINC01089-207ENST00000538335 630 ntTSL 3 BASIC34.42■■■■□ 3.1
PTCH2Q9Y6C5 MZT2B-202ENST00000409255 769 ntAPPRIS ALT2 TSL 5 BASIC34.39■■■■□ 3.1
PTCH2Q9Y6C5 LINC01578-203ENST00000554669 578 ntTSL 5 BASIC34.37■■■■□ 3.09
PTCH2Q9Y6C5 ANAPC11-203ENST00000392376 687 ntAPPRIS P1 TSL 1 (best) BASIC34.36■■■■□ 3.09
PTCH2Q9Y6C5 METRNL-201ENST00000320095 1605 ntAPPRIS P1 TSL 1 (best) BASIC34.35■■■■□ 3.09
PTCH2Q9Y6C5 SAP30-201ENST00000296504 1108 ntAPPRIS P1 TSL 1 (best) BASIC34.33■■■■□ 3.09
PTCH2Q9Y6C5 HOXB3-208ENST00000476342 1420 ntAPPRIS P1 TSL 1 (best) BASIC34.31■■■■□ 3.08
PTCH2Q9Y6C5 UBALD2-203ENST00000589240 660 ntTSL 2 BASIC34.29■■■■□ 3.08
PTCH2Q9Y6C5 AGTRAP-204ENST00000376637 1067 ntTSL 2 BASIC34.25■■■■□ 3.07
PTCH2Q9Y6C5 MARCH2-202ENST00000381035 1192 ntTSL 5 BASIC34.25■■■■□ 3.07
PTCH2Q9Y6C5 CHCHD4-202ENST00000396914 1405 ntAPPRIS P1 TSL 1 (best) BASIC34.24■■■■□ 3.07
PTCH2Q9Y6C5 NT5M-207ENST00000616989 1635 ntTSL 1 (best) BASIC34.23■■■■□ 3.07
PTCH2Q9Y6C5 LY6K-203ENST00000519387 963 ntAPPRIS ALT2 TSL 2 BASIC34.23■■■■□ 3.07
PTCH2Q9Y6C5 AL031258.1-201ENST00000623562 325 ntBASIC34.22■■■■□ 3.07
PTCH2Q9Y6C5 AL133346.1-201ENST00000435287 495 ntTSL 2 BASIC34.2■■■■□ 3.07
PTCH2Q9Y6C5 ADNP-AS1-201ENST00000558899 927 ntTSL 3 BASIC34.19■■■■□ 3.06
PTCH2Q9Y6C5 LFNG-203ENST00000359574 1377 ntAPPRIS ALT1 TSL 1 (best) BASIC34.19■■■■□ 3.06
PTCH2Q9Y6C5 AL136373.1-201ENST00000634804 1449 ntAPPRIS P1 BASIC34.16■■■■□ 3.06
PTCH2Q9Y6C5 LINC01578-204ENST00000554894 556 ntTSL 3 BASIC34.16■■■■□ 3.06
PTCH2Q9Y6C5 LINC01578-207ENST00000556895 802 ntTSL 2 BASIC34.16■■■■□ 3.06
PTCH2Q9Y6C5 NRTN-201ENST00000303212 1109 ntAPPRIS P1 TSL 1 (best) BASIC34.15■■■■□ 3.06
PTCH2Q9Y6C5 MACROD1-201ENST00000255681 1205 ntAPPRIS P1 TSL 1 (best) BASIC34.14■■■■□ 3.06
PTCH2Q9Y6C5 CACNG6-202ENST00000346968 645 ntTSL 5 BASIC34.14■■■■□ 3.06
PTCH2Q9Y6C5 NRGN-202ENST00000412681 1106 ntAPPRIS P1 TSL 1 (best) BASIC34.14■■■■□ 3.06
PTCH2Q9Y6C5 NECTIN3-201ENST00000319792 1549 ntAPPRIS ALT2 TSL 1 (best) BASIC34.13■■■■□ 3.05
Retrieved 100 of 98,524 protein–RNA pairs in 59.1 ms