RNA–Protein interactions for RNA: ENST00000419895.3

AP002884.3-203, humanhuman

TSL 2 BASIC

Gene AP002884.3, Length 1,711 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP002884.3-203ENST00000419895 NISCHQ9Y2I1 1504 aa62.4■■■■■ 7.58
AP002884.3-203ENST00000419895 CCDC180Q9P1Z9 1646 aa54.97■■■■■ 6.39
AP002884.3-203ENST00000419895 ABCC9O60706 1549 aa53.32■■■■■ 6.13
AP002884.3-203ENST00000419895 ZCCHC6Q5VYS8 1495 aaKnown RBP52.1■■■■■ 5.93
AP002884.3-203ENST00000419895 DCAF8L2P0C7V8 631 aa51.98■■■■■ 5.91
AP002884.3-203ENST00000419895 NACADO15069 1562 aa51.58■■■■■ 5.85
AP002884.3-203ENST00000419895 DCAF1Q9Y4B6 1507 aa51.57■■■■■ 5.85
AP002884.3-203ENST00000419895 MYO15BQ96JP2 1530 aa51.51■■■■■ 5.84
AP002884.3-203ENST00000419895 RB1CC1Q8TDY2 1594 aa51.45■■■■■ 5.83
AP002884.3-203ENST00000419895 SCRIBQ14160 1630 aa50.36■■■■■ 5.65
AP002884.3-203ENST00000419895 UNC13AQ9UPW8 1703 aa50.34■■■■■ 5.65
AP002884.3-203ENST00000419895 PABPN1Q86U42 306 aaKnown RBP eCLIP50.07■■■■■ 5.61
AP002884.3-203ENST00000419895 BICRAQ9NZM4 1560 aa50.01■■■■■ 5.6
AP002884.3-203ENST00000419895 SHROOM4Q9ULL8 1493 aa49.87■■■■■ 5.57
AP002884.3-203ENST00000419895 CECR2Q9BXF3 1484 aa48.64■■■■■ 5.38
AP002884.3-203ENST00000419895 EIF4G1Q04637 1599 aaKnown RBP48.58■■■■■ 5.37
AP002884.3-203ENST00000419895 DNAJC5BQ9UF47 199 aa48.49■■■■■ 5.35
AP002884.3-203ENST00000419895 BAZ1AQ9NRL2 1556 aaPredicted RBP48.23■■■■■ 5.31
AP002884.3-203ENST00000419895 SMARCA4P51532 1647 aa48.21■■■■■ 5.31
AP002884.3-203ENST00000419895 CC2D2AQ9P2K1 1620 aa48.2■■■■■ 5.31
AP002884.3-203ENST00000419895 MROH2BQ7Z745 1585 aa48.16■■■■■ 5.3
AP002884.3-203ENST00000419895 RSF1Q96T23 1441 aaPredicted RBP47.89■■■■■ 5.26
AP002884.3-203ENST00000419895 ATAD2BQ9ULI0 1458 aa47.84■■■■■ 5.25
AP002884.3-203ENST00000419895 PEG3Q9GZU2 1588 aa47.72■■■■■ 5.23
AP002884.3-203ENST00000419895 SMARCA2P51531 1590 aa47.7■■■■■ 5.23
AP002884.3-203ENST00000419895 NCAPD3P42695 1498 aa47.69■■■■■ 5.22
AP002884.3-203ENST00000419895 WIZO95785 1651 aa47.64■■■■■ 5.22
AP002884.3-203ENST00000419895 BAZ1BQ9UIG0 1483 aaKnown RBP47.42■■■■■ 5.18
AP002884.3-203ENST00000419895 HMGXB3Q12766 1538 aa47.42■■■■■ 5.18
AP002884.3-203ENST00000419895 SUPT5HO00267 1087 aaKnown RBP47.29■■■■■ 5.16
AP002884.3-203ENST00000419895 TOP2AP11388 1531 aaKnown RBP47.09■■■■■ 5.13
AP002884.3-203ENST00000419895 CCDC88BA6NC98 1476 aa46.65■■■■■ 5.06
AP002884.3-203ENST00000419895 NESP48681 1621 aa46.41■■■■■ 5.02
AP002884.3-203ENST00000419895 CADPSQ9ULU8 1353 aa46.36■■■■■ 5.01
AP002884.3-203ENST00000419895 CFTRP13569 1480 aa46.23■■■■■ 4.99
AP002884.3-203ENST00000419895 LAMC3Q9Y6N6 1575 aa46.21■■■■■ 4.99
AP002884.3-203ENST00000419895 PDS5BQ9NTI5 1447 aa45.92■■■■■ 4.94
AP002884.3-203ENST00000419895 ERCC6Q03468 1493 aa45.8■■■■■ 4.92
AP002884.3-203ENST00000419895 FANCD2Q9BXW9 1451 aa45.8■■■■■ 4.92
AP002884.3-203ENST00000419895 KIF21AQ7Z4S6 1674 aa45.73■■■■■ 4.91
AP002884.3-203ENST00000419895 PRDM2Q13029 1718 aa45.72■■■■■ 4.91
AP002884.3-203ENST00000419895 CEP164Q9UPV0 1460 aa45.62■■■■■ 4.89
AP002884.3-203ENST00000419895 MRC2Q9UBG0 1479 aa45.41■■■■■ 4.86
AP002884.3-203ENST00000419895 THOC2Q8NI27 1593 aaKnown RBP45.4■■■■■ 4.86
AP002884.3-203ENST00000419895 URB2Q14146 1524 aaKnown RBP45.33■■■■■ 4.85
AP002884.3-203ENST00000419895 WDR62O43379 1518 aa45.23■■■■■ 4.83
AP002884.3-203ENST00000419895 ABCC8Q09428 1581 aa45.17■■■■■ 4.82
AP002884.3-203ENST00000419895 TOPBP1Q92547 1522 aa45.14■■■■■ 4.82
AP002884.3-203ENST00000419895 CUX1P39880 1505 aa45.11■■■■■ 4.81
AP002884.3-203ENST00000419895 DNMBPQ6XZF7 1577 aa45.09■■■■■ 4.81
AP002884.3-203ENST00000419895 WRNQ14191 1432 aaPredicted RBP eCLIP45.07■■■■■ 4.81
AP002884.3-203ENST00000419895 CUX2O14529 1486 aa45.02■■■■■ 4.8
AP002884.3-203ENST00000419895 SYNJ1O43426 1573 aa44.92■■■■■ 4.78
AP002884.3-203ENST00000419895 TOP2BQ02880 1626 aa44.84■■■■■ 4.77
AP002884.3-203ENST00000419895 POLA1P09884 1462 aaPredicted RBP44.83■■■■■ 4.77
AP002884.3-203ENST00000419895 FGD5Q6ZNL6 1462 aa44.81■■■■■ 4.76
AP002884.3-203ENST00000419895 BIVM-ERCC5R4GMW8 1640 aa44.79■■■■■ 4.76
AP002884.3-203ENST00000419895 RAD54L2Q9Y4B4 1467 aa44.69■■■■■ 4.74
AP002884.3-203ENST00000419895 SOGA1O94964 1423 aa44.67■■■■■ 4.74
AP002884.3-203ENST00000419895 IFT140Q96RY7 1462 aa44.63■■■■■ 4.74
AP002884.3-203ENST00000419895 TARBP1Q13395 1621 aaKnown RBP44.59■■■■■ 4.73
AP002884.3-203ENST00000419895 CHIC1Q5VXU3 224 aa44.56■■■■■ 4.72
AP002884.3-203ENST00000419895 TRIM41Q8WV44 630 aa44.55■■■■■ 4.72
AP002884.3-203ENST00000419895 ZNF608Q9ULD9 1512 aaPredicted RBP44.5■■■■■ 4.71
AP002884.3-203ENST00000419895 TDRD9Q8NDG6 1382 aaKnown RBP44.4■■■■■ 4.7
AP002884.3-203ENST00000419895 ABCA10Q8WWZ4 1543 aa44.39■■■■■ 4.7
AP002884.3-203ENST00000419895 AQRO60306 1485 aaKnown RBP eCLIP44.35■■■■■ 4.69
AP002884.3-203ENST00000419895 WDR97A6NE52 1622 aa44.32■■■■■ 4.69
AP002884.3-203ENST00000419895 EIF4G3O43432 1585 aaKnown RBP44.22■■■■■ 4.67
AP002884.3-203ENST00000419895 GAPVD1Q14C86 1478 aa44.14■■■■■ 4.66
AP002884.3-203ENST00000419895 ABCA5Q8WWZ7 1642 aa44.12■■■■■ 4.65
AP002884.3-203ENST00000419895 KIF27Q86VH2 1401 aa44.03■■■■■ 4.64
AP002884.3-203ENST00000419895 RUSC2Q8N2Y8 1516 aa44.03■■■■■ 4.64
AP002884.3-203ENST00000419895 GRIN2BQ13224 1484 aa44■■■■■ 4.63
AP002884.3-203ENST00000419895 IGF1RP08069 1367 aa43.88■■■■■ 4.62
AP002884.3-203ENST00000419895 PBRM1Q86U86 1689 aa43.88■■■■■ 4.62
AP002884.3-203ENST00000419895 SNAPC4Q5SXM2 1469 aa43.87■■■■■ 4.61
AP002884.3-203ENST00000419895 ERICH3Q5RHP9 1530 aa43.83■■■■■ 4.61
AP002884.3-203ENST00000419895 MAGI1Q96QZ7 1491 aaPredicted RBP43.78■■■■■ 4.6
AP002884.3-203ENST00000419895 FAM9AQ8IZU1 332 aaPredicted RBP43.7■■■■■ 4.59
AP002884.3-203ENST00000419895 FBLN2P98095 1184 aa43.67■■■■■ 4.58
AP002884.3-203ENST00000419895 SYNJ2O15056 1496 aa43.64■■■■■ 4.58
AP002884.3-203ENST00000419895 FHAD1B1AJZ9 1412 aa43.63■■■■■ 4.58
AP002884.3-203ENST00000419895 ADAMTS12P58397 1594 aa43.63■■■■■ 4.58
AP002884.3-203ENST00000419895 CHMP7Q8WUX9 453 aaPredicted RBP43.62■■■■■ 4.57
AP002884.3-203ENST00000419895 CSRNP3Q8WYN3 585 aa43.61■■■■■ 4.57
AP002884.3-203ENST00000419895 EEA1Q15075 1411 aa43.6■■■■■ 4.57
AP002884.3-203ENST00000419895 CARMIL1Q5VZK9 1371 aa43.58■■■■■ 4.57
AP002884.3-203ENST00000419895 CHD1O14646 1710 aa43.51■■■■■ 4.56
AP002884.3-203ENST00000419895 CUL7Q14999 1698 aa43.5■■■■■ 4.55
AP002884.3-203ENST00000419895 GRIN2AQ12879 1464 aa43.45■■■■■ 4.55
AP002884.3-203ENST00000419895 PRXQ9BXM0 1461 aa43.43■■■■■ 4.54
AP002884.3-203ENST00000419895 OSCARQ8IYS5 282 aa43.43■■■■■ 4.54
AP002884.3-203ENST00000419895 RAPGEF2Q9Y4G8 1499 aa43.36■■■■■ 4.53
AP002884.3-203ENST00000419895 NUP160Q12769 1436 aa43.25■■■■■ 4.51
AP002884.3-203ENST00000419895 CEP170Q5SW79 1584 aa43.22■■■■■ 4.51
AP002884.3-203ENST00000419895 EHMT2Q96KQ7 1210 aa43.14■■■■■ 4.5
AP002884.3-203ENST00000419895 KIF21BO75037 1637 aa43.11■■■■■ 4.49
AP002884.3-203ENST00000419895 CLASP1Q7Z460 1538 aa43.09■■■■■ 4.49
AP002884.3-203ENST00000419895 KIAA0586Q9BVV6 1533 aa43■■■■■ 4.47
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms