Protein–RNA interactions for Protein: Q96PC3

AP1S3, AP-1 complex subunit sigma-3, humanhuman

Predictions only

Length 154 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S3Q96PC3 INPPL1-201ENST00000298229 4733 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
AP1S3Q96PC3 SIGMAR1-203ENST00000378892 1743 ntTSL 2 BASIC19.37■□□□□ 0.69
AP1S3Q96PC3 CAPN10-208ENST00000404753 2570 ntAPPRIS ALT2 TSL 5 BASIC19.37■□□□□ 0.69
AP1S3Q96PC3 DEAF1-201ENST00000382409 2500 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
AP1S3Q96PC3 DGKQ-201ENST00000273814 4636 ntAPPRIS P2 TSL 1 (best) BASIC19.36■□□□□ 0.69
AP1S3Q96PC3 SH3RF3-201ENST00000309415 5803 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
AP1S3Q96PC3 GAL3ST1-205ENST00000406361 1819 ntAPPRIS P1 TSL 2 BASIC19.36■□□□□ 0.69
AP1S3Q96PC3 KIAA1456-206ENST00000528753 2392 ntTSL 2 BASIC19.36■□□□□ 0.69
AP1S3Q96PC3 RASGRP1-201ENST00000310803 5023 ntAPPRIS P2 TSL 1 (best) BASIC19.36■□□□□ 0.69
AP1S3Q96PC3 RASGRP1-204ENST00000539159 5021 ntAPPRIS ALT1 TSL 5 BASIC19.36■□□□□ 0.69
AP1S3Q96PC3 SLC52A2-201ENST00000329994 1896 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
AP1S3Q96PC3 VAV3-202ENST00000370056 4990 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
AP1S3Q96PC3 RAB11FIP3-201ENST00000262305 4831 ntAPPRIS P2 TSL 1 (best) BASIC19.35■□□□□ 0.69
AP1S3Q96PC3 SMURF1-202ENST00000361368 5581 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
AP1S3Q96PC3 EDC4-201ENST00000358933 4800 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
AP1S3Q96PC3 FAM102B-201ENST00000370035 5600 ntAPPRIS P2 TSL 1 (best) BASIC19.34■□□□□ 0.69
AP1S3Q96PC3 SLC22A23-201ENST00000380298 1574 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
AP1S3Q96PC3 FOXE3-201ENST00000335071 1981 ntAPPRIS P1 BASIC19.33■□□□□ 0.69
AP1S3Q96PC3 CGREF1-202ENST00000312734 1610 ntAPPRIS P2 TSL 5 BASIC19.33■□□□□ 0.69
AP1S3Q96PC3 PTPRJ-201ENST00000418331 5122 ntAPPRIS P2 TSL 1 (best) BASIC19.33■□□□□ 0.68
AP1S3Q96PC3 HES7-202ENST00000541682 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC19.33■□□□□ 0.68
AP1S3Q96PC3 FAAH-201ENST00000243167 2094 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
AP1S3Q96PC3 GRIN1-208ENST00000371561 5149 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
AP1S3Q96PC3 HNRNPAB-206ENST00000506339 1747 ntAPPRIS ALT2 TSL 5 BASIC19.32■□□□□ 0.68
AP1S3Q96PC3 ITGA9-203ENST00000422441 2282 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
AP1S3Q96PC3 TMEM9-201ENST00000367330 1959 ntAPPRIS P3 TSL 1 (best) BASIC19.32■□□□□ 0.68
AP1S3Q96PC3 EFNA3-201ENST00000368408 1782 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
AP1S3Q96PC3 ACTR3B-202ENST00000377776 1566 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
AP1S3Q96PC3 FOXQ1-201ENST00000296839 2309 ntAPPRIS P1 BASIC19.31■□□□□ 0.68
AP1S3Q96PC3 C9orf40-201ENST00000376854 2327 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
AP1S3Q96PC3 PICK1-201ENST00000356976 2055 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
AP1S3Q96PC3 PQLC1-203ENST00000397778 2555 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
AP1S3Q96PC3 USP12-201ENST00000282344 4511 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
AP1S3Q96PC3 MNX1-201ENST00000252971 2174 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
AP1S3Q96PC3 ARID4B-203ENST00000366603 5946 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
AP1S3Q96PC3 HDAC4-215ENST00000543185 8990 ntTSL 5 BASIC19.3■□□□□ 0.68
AP1S3Q96PC3 TM6SF1-202ENST00000322019 2074 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
AP1S3Q96PC3 RAB40C-201ENST00000248139 2699 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
AP1S3Q96PC3 ARSB-201ENST00000264914 5327 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
AP1S3Q96PC3 CNNM1-201ENST00000356713 5959 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
AP1S3Q96PC3 PARD3-207ENST00000374788 5996 ntAPPRIS ALT1 TSL 1 (best) BASIC19.28■□□□□ 0.68
AP1S3Q96PC3 SSBP4-202ENST00000348495 1721 ntAPPRIS ALT1 TSL 2 BASIC19.28■□□□□ 0.68
AP1S3Q96PC3 ESRRA-203ENST00000406310 2218 ntAPPRIS ALT1 TSL 1 (best) BASIC19.28■□□□□ 0.68
AP1S3Q96PC3 KCNMA1-209ENST00000372443 5059 ntAPPRIS ALT2 TSL 5 BASIC19.28■□□□□ 0.68
AP1S3Q96PC3 DYNLL1-207ENST00000549989 719 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
AP1S3Q96PC3 DYNLL1-208ENST00000550178 581 ntBASIC19.28■□□□□ 0.68
AP1S3Q96PC3 CSNK1E-203ENST00000396832 2791 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
AP1S3Q96PC3 RASEF-202ENST00000376447 5576 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
AP1S3Q96PC3 SLC30A10-202ENST00000366926 1915 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
AP1S3Q96PC3 PDPK1-203ENST00000389224 2416 ntTSL 2 BASIC19.26■□□□□ 0.67
AP1S3Q96PC3 PGM5P2-201ENST00000613141 1980 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
AP1S3Q96PC3 ABHD17A-201ENST00000250974 1630 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
AP1S3Q96PC3 UPF1-207ENST00000599848 5311 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
AP1S3Q96PC3 NKX1-1-201ENST00000422806 1236 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
AP1S3Q96PC3 ALYREF-202ENST00000505490 1088 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
AP1S3Q96PC3 CHMP4B-201ENST00000217402 1646 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
AP1S3Q96PC3 AL135925.1-201ENST00000605920 1701 ntBASIC19.25■□□□□ 0.67
AP1S3Q96PC3 ARHGAP22-202ENST00000374170 2107 ntTSL 5 BASIC19.25■□□□□ 0.67
AP1S3Q96PC3 DENND4B-201ENST00000361217 5706 ntAPPRIS P2 TSL 1 (best) BASIC19.25■□□□□ 0.67
AP1S3Q96PC3 NPB-202ENST00000573081 2154 ntAPPRIS ALT2 BASIC19.25■□□□□ 0.67
AP1S3Q96PC3 HNRNPAB-202ENST00000358344 1796 ntAPPRIS P4 TSL 1 (best) BASIC19.25■□□□□ 0.67
AP1S3Q96PC3 FZD8-201ENST00000374694 4030 ntAPPRIS P1 BASIC19.25■□□□□ 0.67
AP1S3Q96PC3 TSPAN11-203ENST00000545802 1649 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
AP1S3Q96PC3 IL17D-201ENST00000304920 1861 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
AP1S3Q96PC3 SHOX2-204ENST00000483851 1866 ntAPPRIS ALT2 TSL 2 BASIC19.24■□□□□ 0.67
AP1S3Q96PC3 ZFYVE9-201ENST00000287727 5194 ntAPPRIS P4 TSL 5 BASIC19.24■□□□□ 0.67
AP1S3Q96PC3 SAP30-201ENST00000296504 1108 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
AP1S3Q96PC3 POU3F3-201ENST00000361360 3064 ntAPPRIS P1 BASIC19.24■□□□□ 0.67
AP1S3Q96PC3 GKAP1-203ENST00000376371 1778 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
AP1S3Q96PC3 CATIP-201ENST00000289388 1323 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
AP1S3Q96PC3 KCNJ4-201ENST00000303592 2065 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
AP1S3Q96PC3 TSPOAP1-AS1-203ENST00000579527 2042 ntTSL 2 BASIC19.22■□□□□ 0.67
AP1S3Q96PC3 JMJD8-216ENST00000609261 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
AP1S3Q96PC3 AP003068.2-202ENST00000526623 1662 ntTSL 2 BASIC19.22■□□□□ 0.67
AP1S3Q96PC3 HMGB1-205ENST00000399494 1282 ntAPPRIS P1 TSL 2 BASIC19.22■□□□□ 0.67
AP1S3Q96PC3 KCNQ5-204ENST00000370392 1469 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
AP1S3Q96PC3 AVEN-201ENST00000306730 1605 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
AP1S3Q96PC3 HOOK2-201ENST00000264827 2603 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
AP1S3Q96PC3 HOXB3-201ENST00000311626 2642 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
AP1S3Q96PC3 TCEA2-204ENST00000395053 1733 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
AP1S3Q96PC3 QKI-203ENST00000361752 9463 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
AP1S3Q96PC3 SOBP-201ENST00000317357 5245 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
AP1S3Q96PC3 TESK1-201ENST00000336395 2421 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
AP1S3Q96PC3 AGAP1-205ENST00000409538 6138 ntTSL 5 BASIC19.21■□□□□ 0.66
AP1S3Q96PC3 ANKS1B-202ENST00000333732 1675 ntTSL 2 BASIC19.2■□□□□ 0.66
AP1S3Q96PC3 DPF1-202ENST00000412732 2303 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
AP1S3Q96PC3 PLSCR3-209ENST00000574401 2032 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
AP1S3Q96PC3 SLC4A4-201ENST00000264485 5852 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
AP1S3Q96PC3 AC142086.6-201ENST00000621154 1765 ntBASIC19.2■□□□□ 0.66
AP1S3Q96PC3 ASAP2-202ENST00000315273 5582 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
AP1S3Q96PC3 BMP7-204ENST00000450594 1857 ntTSL 2 BASIC19.2■□□□□ 0.66
AP1S3Q96PC3 LRRC14-201ENST00000292524 5328 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
AP1S3Q96PC3 THAP4-204ENST00000407315 2367 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
AP1S3Q96PC3 GABRA5-203ENST00000400081 2761 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
AP1S3Q96PC3 ATPAF1-202ENST00000371937 1827 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
AP1S3Q96PC3 TMEM121B-201ENST00000331437 4954 ntAPPRIS P3 BASIC19.19■□□□□ 0.66
AP1S3Q96PC3 ZNF787-203ENST00000610935 1925 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
AP1S3Q96PC3 COL13A1-213ENST00000520267 2276 ntAPPRIS ALT2 TSL 5 BASIC19.18■□□□□ 0.66
AP1S3Q96PC3 SCYL2-201ENST00000360820 5779 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
AP1S3Q96PC3 SSBP4-206ENST00000599699 793 ntTSL 2 BASIC19.18■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 12.8 ms