RNA–Protein interactions for RNA: ENST00000358933.9

EDC4-201, Transcript of enhancer of mRNA decapping 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EDC4, Length 4,800 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EDC4-201ENST00000358933 DCAF8L2P0C7V8 631 aa33.56■■■□□ 2.96
EDC4-201ENST00000358933 SUPT5HO00267 1087 aaKnown RBP33.19■■■□□ 2.9
EDC4-201ENST00000358933 PELP1Q8IZL8 1130 aaKnown RBP32.7■■■□□ 2.82
EDC4-201ENST00000358933 NISCHQ9Y2I1 1504 aa32.6■■■□□ 2.81
EDC4-201ENST00000358933 SHROOM4Q9ULL8 1493 aa32.25■■■□□ 2.75
EDC4-201ENST00000358933 PCGF6Q9BYE7 350 aa32.18■■■□□ 2.74
EDC4-201ENST00000358933 MYT1Q01538 1121 aa32.07■■■□□ 2.72
EDC4-201ENST00000358933 CENPBP07199 599 aaPredicted RBP31.86■■■□□ 2.69
EDC4-201ENST00000358933 EHMT2Q96KQ7 1210 aa31.84■■■□□ 2.69
EDC4-201ENST00000358933 ZEB1P37275 1124 aaPredicted RBP31.77■■■□□ 2.68
EDC4-201ENST00000358933 APLP2Q06481 763 aa31.3■■■□□ 2.6
EDC4-201ENST00000358933 ERICH6Q7L0X2 663 aa31.28■■■□□ 2.6
EDC4-201ENST00000358933 HRCP23327 699 aa31.23■■■□□ 2.59
EDC4-201ENST00000358933 FAM9AQ8IZU1 332 aaPredicted RBP31.22■■■□□ 2.59
EDC4-201ENST00000358933 CCER1Q8TC90 406 aaPredicted RBP31.17■■■□□ 2.58
EDC4-201ENST00000358933 TTBK1Q5TCY1 1321 aaPredicted RBP31■■■□□ 2.55
EDC4-201ENST00000358933 YTHDC1Q96MU7 727 aaKnown RBP30.82■■■□□ 2.53
EDC4-201ENST00000358933 TRIM26Q12899 539 aaPredicted RBP30.75■■■□□ 2.51
EDC4-201ENST00000358933 NEFLP07196 543 aa30.69■■■□□ 2.5
EDC4-201ENST00000358933 TRIM41Q8WV44 630 aa30.69■■■□□ 2.5
EDC4-201ENST00000358933 PPARGC1BQ86YN6 1023 aaKnown RBP30.43■■■□□ 2.46
EDC4-201ENST00000358933 UBTFP17480 764 aaKnown RBP30.12■■■□□ 2.41
EDC4-201ENST00000358933 RANGAP1P46060 587 aaPredicted RBP30.11■■■□□ 2.41
EDC4-201ENST00000358933 CHIC1Q5VXU3 224 aa30.06■■■□□ 2.4
EDC4-201ENST00000358933 LOC105371045A0A1W2PR82 267 aa29.99■■■□□ 2.39
EDC4-201ENST00000358933 DIEXFQ68CQ4 756 aaKnown RBP29.91■■■□□ 2.38
EDC4-201ENST00000358933 GTF3C3Q9Y5Q9 886 aa29.79■■■□□ 2.36
EDC4-201ENST00000358933 ATP1B4Q9UN42 357 aaPredicted RBP29.68■■■□□ 2.34
EDC4-201ENST00000358933 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP29.62■■■□□ 2.33
EDC4-201ENST00000358933 DAXXQ9UER7 740 aaPredicted RBP29.6■■■□□ 2.33
EDC4-201ENST00000358933 RTL5Q5HYW3 569 aaPredicted RBP29.49■■■□□ 2.31
EDC4-201ENST00000358933 HNRNPUL2Q1KMD3 747 aaKnown RBP29.48■■■□□ 2.31
EDC4-201ENST00000358933 ACIN1Q9UKV3 1341 aaKnown RBP29.47■■■□□ 2.31
EDC4-201ENST00000358933 ITGAEP38570 1179 aa29.26■■■□□ 2.27
EDC4-201ENST00000358933 BCANQ96GW7 911 aa29.15■■■□□ 2.26
EDC4-201ENST00000358933 ZNF316A6NFI3 1004 aaPredicted RBP29.09■■■□□ 2.25
EDC4-201ENST00000358933 POLR3GLQ9BT43 218 aa29.02■■■□□ 2.24
EDC4-201ENST00000358933 CDK11AQ9UQ88 783 aaPredicted RBP28.99■■■□□ 2.23
EDC4-201ENST00000358933 CNGB1Q14028 1251 aaPredicted RBP28.84■■■□□ 2.21
EDC4-201ENST00000358933 SCAF1Q9H7N4 1312 aaKnown RBP28.84■■■□□ 2.21
EDC4-201ENST00000358933 CLSPNQ9HAW4 1339 aa28.82■■■□□ 2.2
EDC4-201ENST00000358933 NEUROD1Q13562 356 aa28.74■■■□□ 2.19
EDC4-201ENST00000358933 ANP32CO43423 234 aa28.74■■■□□ 2.19
EDC4-201ENST00000358933 DCAF1Q9Y4B6 1507 aa28.57■■■□□ 2.16
EDC4-201ENST00000358933 MYT1LQ9UL68 1186 aa28.52■■■□□ 2.16
EDC4-201ENST00000358933 ANP32AP39687 249 aaKnown RBP28.5■■■□□ 2.15
EDC4-201ENST00000358933 FKBP8Q14318 412 aa28.44■■■□□ 2.14
EDC4-201ENST00000358933 FAM50AQ14320 339 aaKnown RBP28.44■■■□□ 2.14
EDC4-201ENST00000358933 EIF5BO60841 1220 aaKnown RBP28.36■■■□□ 2.13
EDC4-201ENST00000358933 TRIM52Q96A61 297 aa28.22■■■□□ 2.11
EDC4-201ENST00000358933 NPM2Q86SE8 214 aaKnown RBP28.14■■■□□ 2.1
EDC4-201ENST00000358933 ANP32EQ9BTT0 268 aa28.11■■■□□ 2.09
EDC4-201ENST00000358933 GLIPR1L2Q4G1C9 344 aa28.09■■■□□ 2.09
EDC4-201ENST00000358933 MIER1Q8N108 512 aa28.07■■■□□ 2.08
EDC4-201ENST00000358933 SLC4A1APQ9BWU0 796 aaKnown RBP28.01■■■□□ 2.07
EDC4-201ENST00000358933 NBR1Q14596 966 aa28■■■□□ 2.07
EDC4-201ENST00000358933 HNRNPUQ00839 825 aaKnown RBP eCLIP27.99■■■□□ 2.07
EDC4-201ENST00000358933 CSRNP3Q8WYN3 585 aa27.97■■■□□ 2.07
EDC4-201ENST00000358933 ZBTB47Q9UFB7 747 aaPredicted RBP27.96■■■□□ 2.07
EDC4-201ENST00000358933 DDX10Q13206 875 aaKnown RBP27.93■■■□□ 2.06
EDC4-201ENST00000358933 ZNF326Q5BKZ1 582 aaKnown RBP27.93■■■□□ 2.06
EDC4-201ENST00000358933 CANXP27824 592 aaKnown RBP27.83■■■□□ 2.04
EDC4-201ENST00000358933 CCDC136Q96JN2 1154 aa27.79■■■□□ 2.04
EDC4-201ENST00000358933 ANP32BQ92688 251 aaKnown RBP27.75■■■□□ 2.03
EDC4-201ENST00000358933 FAM9BQ8IZU0 186 aa27.71■■■□□ 2.03
EDC4-201ENST00000358933 TONSLQ96HA7 1378 aa27.7■■■□□ 2.02
EDC4-201ENST00000358933 MYO15BQ96JP2 1530 aa27.67■■■□□ 2.02
EDC4-201ENST00000358933 BCL11AQ9H165 835 aa27.65■■■□□ 2.02
EDC4-201ENST00000358933 UPF2Q9HAU5 1272 aaKnown RBP27.6■■■□□ 2.01
EDC4-201ENST00000358933 IRX6P78412 446 aaPredicted RBP27.59■■■□□ 2.01
EDC4-201ENST00000358933 CCDC180Q9P1Z9 1646 aa27.59■■■□□ 2.01
EDC4-201ENST00000358933 HSP90AA1P07900 732 aaKnown RBP27.49■■□□□ 1.99
EDC4-201ENST00000358933 SUPT16HQ9Y5B9 1047 aaKnown RBP27.49■■□□□ 1.99
EDC4-201ENST00000358933 MRS2Q9HD23 443 aa27.47■■□□□ 1.99
EDC4-201ENST00000358933 TMC1Q8TDI8 760 aa27.4■■□□□ 1.98
EDC4-201ENST00000358933 P3H3Q8IVL6 736 aa27.38■■□□□ 1.97
EDC4-201ENST00000358933 ARXQ96QS3 562 aa27.38■■□□□ 1.97
EDC4-201ENST00000358933 DDRGK1Q96HY6 314 aa27.36■■□□□ 1.97
EDC4-201ENST00000358933 SALL2Q9Y467 1007 aaPredicted RBP27.35■■□□□ 1.97
EDC4-201ENST00000358933 GOLGA6L2Q8N9W4 650 aaPredicted RBP27.33■■□□□ 1.96
EDC4-201ENST00000358933 NEFMP07197 916 aa27.31■■□□□ 1.96
EDC4-201ENST00000358933 PPM1GO15355 546 aaPredicted RBP27.28■■□□□ 1.96
EDC4-201ENST00000358933 HIRIP3Q9BW71 556 aaPredicted RBP27.27■■□□□ 1.96
EDC4-201ENST00000358933 ERICH6BQ5W0A0 696 aa27.25■■□□□ 1.95
EDC4-201ENST00000358933 NOP58Q9Y2X3 529 aaKnown RBP27.24■■□□□ 1.95
EDC4-201ENST00000358933 RTN4Q9NQC3 1192 aaKnown RBP27.21■■□□□ 1.95
EDC4-201ENST00000358933 PPP4R2Q9NY27 417 aa27.2■■□□□ 1.95
EDC4-201ENST00000358933 PABPN1Q86U42 306 aaKnown RBP eCLIP27.16■■□□□ 1.949e-10■■□□□ 14.1
EDC4-201ENST00000358933 RBM19Q9Y4C8 960 aaKnown RBP27.16■■□□□ 1.94
EDC4-201ENST00000358933 DEKP35659 375 aaKnown RBP27.16■■□□□ 1.94
EDC4-201ENST00000358933 BECN1Q14457 450 aa27.15■■□□□ 1.94
EDC4-201ENST00000358933 TRIM44Q96DX7 344 aaPredicted RBP27.14■■□□□ 1.94
EDC4-201ENST00000358933 ZCCHC6Q5VYS8 1495 aaKnown RBP27.14■■□□□ 1.93
EDC4-201ENST00000358933 EIF4G2P78344 907 aaKnown RBP eCLIP27.13■■□□□ 1.93
EDC4-201ENST00000358933 CLIP1P30622 1438 aa27.07■■□□□ 1.92
EDC4-201ENST00000358933 LAS1LQ9Y4W2 734 aaKnown RBP27.05■■□□□ 1.92
EDC4-201ENST00000358933 CEP162Q5TB80 1403 aa27.04■■□□□ 1.92
EDC4-201ENST00000358933 ARID3CA6NKF2 412 aa27.04■■□□□ 1.92
EDC4-201ENST00000358933 WDR43Q15061 677 aaKnown RBP eCLIP27.02■■□□□ 1.92
EDC4-201ENST00000358933 ZNF777Q9ULD5 760 aaPredicted RBP27.01■■□□□ 1.92
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms