RNA–Protein interactions for RNA: ENST00000282344.10

USP12-201, Transcript of ubiquitin specific peptidase 12, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP12, Length 4,511 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP12-201ENST00000282344 NISCHQ9Y2I1 1504 aa37.77■■■■□ 3.64
USP12-201ENST00000282344 DCAF8L2P0C7V8 631 aa37.49■■■■□ 3.59
USP12-201ENST00000282344 SUPT5HO00267 1087 aaKnown RBP36.65■■■■□ 3.46
USP12-201ENST00000282344 SHROOM4Q9ULL8 1493 aa36.2■■■■□ 3.38
USP12-201ENST00000282344 EHMT2Q96KQ7 1210 aa35.07■■■■□ 3.21
USP12-201ENST00000282344 PCGF6Q9BYE7 350 aa34.75■■■■□ 3.15
USP12-201ENST00000282344 FAM9AQ8IZU1 332 aaPredicted RBP34.43■■■■□ 3.1
USP12-201ENST00000282344 TTBK1Q5TCY1 1321 aaPredicted RBP33.94■■■■□ 3.02
USP12-201ENST00000282344 TRIM41Q8WV44 630 aa33.79■■■■□ 3
USP12-201ENST00000282344 APLP2Q06481 763 aa33.65■■■□□ 2.98
USP12-201ENST00000282344 ZEB1P37275 1124 aaPredicted RBP33.55■■■□□ 2.96
USP12-201ENST00000282344 HRCP23327 699 aa33.47■■■□□ 2.95
USP12-201ENST00000282344 CCER1Q8TC90 406 aaPredicted RBP33.45■■■□□ 2.95
USP12-201ENST00000282344 CHIC1Q5VXU3 224 aa33.42■■■□□ 2.94
USP12-201ENST00000282344 PELP1Q8IZL8 1130 aaKnown RBP33.34■■■□□ 2.93
USP12-201ENST00000282344 LOC105371045A0A1W2PR82 267 aa33.32■■■□□ 2.92
USP12-201ENST00000282344 PPARGC1BQ86YN6 1023 aaKnown RBP33.27■■■□□ 2.92
USP12-201ENST00000282344 RANGAP1P46060 587 aaPredicted RBP33.25■■■□□ 2.91
USP12-201ENST00000282344 CENPBP07199 599 aaPredicted RBP33.21■■■□□ 2.91
USP12-201ENST00000282344 TRIM26Q12899 539 aaPredicted RBP33.2■■■□□ 2.91
USP12-201ENST00000282344 UBTFP17480 764 aaKnown RBP33.05■■■□□ 2.88
USP12-201ENST00000282344 YTHDC1Q96MU7 727 aaKnown RBP32.8■■■□□ 2.84
USP12-201ENST00000282344 ATP1B4Q9UN42 357 aaPredicted RBP32.52■■■□□ 2.8
USP12-201ENST00000282344 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP32.32■■■□□ 2.76
USP12-201ENST00000282344 HNRNPUL2Q1KMD3 747 aaKnown RBP32.22■■■□□ 2.75
USP12-201ENST00000282344 ITGAEP38570 1179 aa32.06■■■□□ 2.72
USP12-201ENST00000282344 ERICH6Q7L0X2 663 aa32.03■■■□□ 2.72
USP12-201ENST00000282344 NEFLP07196 543 aa32.02■■■□□ 2.72
USP12-201ENST00000282344 DIEXFQ68CQ4 756 aaKnown RBP32■■■□□ 2.71
USP12-201ENST00000282344 MYT1Q01538 1121 aa31.85■■■□□ 2.69
USP12-201ENST00000282344 GTF3C3Q9Y5Q9 886 aa31.58■■■□□ 2.65
USP12-201ENST00000282344 ABCC9O60706 1549 aa31.55■■■□□ 2.64
USP12-201ENST00000282344 ZCCHC6Q5VYS8 1495 aaKnown RBP31.44■■■□□ 2.62
USP12-201ENST00000282344 PABPN1Q86U42 306 aaKnown RBP eCLIP31.42■■■□□ 2.62
USP12-201ENST00000282344 DCAF1Q9Y4B6 1507 aa31.32■■■□□ 2.6
USP12-201ENST00000282344 POLR3GLQ9BT43 218 aa31.28■■■□□ 2.6
USP12-201ENST00000282344 ZNF316A6NFI3 1004 aaPredicted RBP31.28■■■□□ 2.6
USP12-201ENST00000282344 CNGB1Q14028 1251 aaPredicted RBP31.27■■■□□ 2.6
USP12-201ENST00000282344 MYO15BQ96JP2 1530 aa31.27■■■□□ 2.6
USP12-201ENST00000282344 ACIN1Q9UKV3 1341 aaKnown RBP31.27■■■□□ 2.6
USP12-201ENST00000282344 FAM50AQ14320 339 aaKnown RBP31.17■■■□□ 2.58
USP12-201ENST00000282344 CSRNP3Q8WYN3 585 aa31.17■■■□□ 2.58
USP12-201ENST00000282344 NEUROD1Q13562 356 aa31.11■■■□□ 2.57
USP12-201ENST00000282344 BCANQ96GW7 911 aa31.04■■■□□ 2.56
USP12-201ENST00000282344 SCRIBQ14160 1630 aa30.89■■■□□ 2.54
USP12-201ENST00000282344 SCAF1Q9H7N4 1312 aaKnown RBP30.79■■■□□ 2.52
USP12-201ENST00000282344 TRIM52Q96A61 297 aa30.77■■■□□ 2.52
USP12-201ENST00000282344 ANP32CO43423 234 aa30.71■■■□□ 2.51
USP12-201ENST00000282344 P3H3Q8IVL6 736 aa30.66■■■□□ 2.5
USP12-201ENST00000282344 DAXXQ9UER7 740 aaPredicted RBP30.61■■■□□ 2.49
USP12-201ENST00000282344 CCDC180Q9P1Z9 1646 aa30.57■■■□□ 2.48
USP12-201ENST00000282344 MYT1LQ9UL68 1186 aa30.56■■■□□ 2.48
USP12-201ENST00000282344 RSF1Q96T23 1441 aaPredicted RBP30.53■■■□□ 2.48
USP12-201ENST00000282344 ZNF326Q5BKZ1 582 aaKnown RBP30.45■■■□□ 2.47
USP12-201ENST00000282344 MIER1Q8N108 512 aa30.45■■■□□ 2.46
USP12-201ENST00000282344 CDK11AQ9UQ88 783 aaPredicted RBP30.37■■■□□ 2.45
USP12-201ENST00000282344 RTL5Q5HYW3 569 aaPredicted RBP30.36■■■□□ 2.45
USP12-201ENST00000282344 DDX10Q13206 875 aaKnown RBP30.34■■■□□ 2.45
USP12-201ENST00000282344 ARID3CA6NKF2 412 aa30.32■■■□□ 2.44
USP12-201ENST00000282344 FKBP8Q14318 412 aa30.3■■■□□ 2.44
USP12-201ENST00000282344 CEP162Q5TB80 1403 aa30.19■■■□□ 2.42
USP12-201ENST00000282344 SLC4A1APQ9BWU0 796 aaKnown RBP30.18■■■□□ 2.42
USP12-201ENST00000282344 CLSPNQ9HAW4 1339 aa30.17■■■□□ 2.42
USP12-201ENST00000282344 CLIP1P30622 1438 aa30.16■■■□□ 2.42
USP12-201ENST00000282344 TONSLQ96HA7 1378 aa30.09■■■□□ 2.41
USP12-201ENST00000282344 HNRNPUQ00839 825 aaKnown RBP eCLIP30.07■■■□□ 2.4
USP12-201ENST00000282344 HIRIP3Q9BW71 556 aaPredicted RBP30.05■■■□□ 2.4
USP12-201ENST00000282344 FBLN2P98095 1184 aa30.03■■■□□ 2.4
USP12-201ENST00000282344 ZNF777Q9ULD5 760 aaPredicted RBP29.92■■■□□ 2.38
USP12-201ENST00000282344 FAM9BQ8IZU0 186 aa29.92■■■□□ 2.38
USP12-201ENST00000282344 GOLGA3Q08378 1498 aa29.91■■■□□ 2.38
USP12-201ENST00000282344 TNIKQ9UKE5 1360 aa29.9■■■□□ 2.38
USP12-201ENST00000282344 EEA1Q15075 1411 aa29.9■■■□□ 2.38
USP12-201ENST00000282344 CHIC2Q9UKJ5 165 aa29.89■■■□□ 2.37
USP12-201ENST00000282344 CECR2Q9BXF3 1484 aa29.86■■■□□ 2.37
USP12-201ENST00000282344 WRNQ14191 1432 aaPredicted RBP eCLIP29.81■■■□□ 2.36
USP12-201ENST00000282344 RB1CC1Q8TDY2 1594 aa29.8■■■□□ 2.36
USP12-201ENST00000282344 IRX6P78412 446 aaPredicted RBP29.76■■■□□ 2.35
USP12-201ENST00000282344 ANP32AP39687 249 aaKnown RBP29.75■■■□□ 2.35
USP12-201ENST00000282344 NPM2Q86SE8 214 aaKnown RBP29.74■■■□□ 2.35
USP12-201ENST00000282344 SOGA1O94964 1423 aa29.67■■■□□ 2.34
USP12-201ENST00000282344 SALL2Q9Y467 1007 aaPredicted RBP29.66■■■□□ 2.34
USP12-201ENST00000282344 MTUS2Q5JR59 1369 aa29.64■■■□□ 2.34
USP12-201ENST00000282344 MRS2Q9HD23 443 aa29.64■■■□□ 2.34
USP12-201ENST00000282344 CEP164Q9UPV0 1460 aa29.61■■■□□ 2.33
USP12-201ENST00000282344 RRP7BPQ9NSQ0 103 aa29.55■■■□□ 2.32
USP12-201ENST00000282344 CANXP27824 592 aaKnown RBP29.54■■■□□ 2.32
USP12-201ENST00000282344 NACADO15069 1562 aa29.54■■■□□ 2.32
USP12-201ENST00000282344 SIN3AQ96ST3 1273 aa29.53■■■□□ 2.32
USP12-201ENST00000282344 CCDC136Q96JN2 1154 aa29.52■■■□□ 2.32
USP12-201ENST00000282344 TMC1Q8TDI8 760 aa29.52■■■□□ 2.32
USP12-201ENST00000282344 EIF4G2P78344 907 aaKnown RBP eCLIP29.47■■■□□ 2.31
USP12-201ENST00000282344 BAZ1AQ9NRL2 1556 aaPredicted RBP29.46■■■□□ 2.31
USP12-201ENST00000282344 MROH2BQ7Z745 1585 aa29.45■■■□□ 2.31
USP12-201ENST00000282344 SUPT16HQ9Y5B9 1047 aaKnown RBP29.43■■■□□ 2.3
USP12-201ENST00000282344 BCL11AQ9H165 835 aa29.43■■■□□ 2.3
USP12-201ENST00000282344 NBR1Q14596 966 aa29.42■■■□□ 2.3
USP12-201ENST00000282344 KDM2AQ9Y2K7 1162 aa29.41■■■□□ 2.3
USP12-201ENST00000282344 CCDC88BA6NC98 1476 aa29.38■■■□□ 2.29
USP12-201ENST00000282344 SENP3-EIF4A1A0A087X0R7 540 aa29.38■■■□□ 2.29
Retrieved 100 of 20,778 RNA–protein pairs in 55.5 ms