RNA–Protein interactions for RNA: ENST00000361217.8

DENND4B-201, Transcript of DENN domain containing 4B, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene DENND4B, Length 5,706 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DENND4B-201ENST00000361217 DCAF8L2P0C7V8 631 aa35.31■■■■□ 3.24
DENND4B-201ENST00000361217 NISCHQ9Y2I1 1504 aa34.18■■■■□ 3.06
DENND4B-201ENST00000361217 SUPT5HO00267 1087 aaKnown RBP33.8■■■■□ 3
DENND4B-201ENST00000361217 SHROOM4Q9ULL8 1493 aa33.24■■■□□ 2.91
DENND4B-201ENST00000361217 EHMT2Q96KQ7 1210 aa32.62■■■□□ 2.81
DENND4B-201ENST00000361217 PELP1Q8IZL8 1130 aaKnown RBP32.59■■■□□ 2.81
DENND4B-201ENST00000361217 APLP2Q06481 763 aa32.26■■■□□ 2.76
DENND4B-201ENST00000361217 PCGF6Q9BYE7 350 aa31.85■■■□□ 2.69
DENND4B-201ENST00000361217 FAM9AQ8IZU1 332 aaPredicted RBP31.84■■■□□ 2.69
DENND4B-201ENST00000361217 ZEB1P37275 1124 aaPredicted RBP31.68■■■□□ 2.66
DENND4B-201ENST00000361217 TTBK1Q5TCY1 1321 aaPredicted RBP31.54■■■□□ 2.64
DENND4B-201ENST00000361217 CENPBP07199 599 aaPredicted RBP31.51■■■□□ 2.63
DENND4B-201ENST00000361217 TRIM41Q8WV44 630 aa31.43■■■□□ 2.62
DENND4B-201ENST00000361217 CCER1Q8TC90 406 aaPredicted RBP31.31■■■□□ 2.6
DENND4B-201ENST00000361217 RANGAP1P46060 587 aaPredicted RBP31.15■■■□□ 2.58
DENND4B-201ENST00000361217 ERICH6Q7L0X2 663 aa31.11■■■□□ 2.57
DENND4B-201ENST00000361217 UBTFP17480 764 aaKnown RBP30.98■■■□□ 2.55
DENND4B-201ENST00000361217 ATP1B4Q9UN42 357 aaPredicted RBP30.88■■■□□ 2.53
DENND4B-201ENST00000361217 NEFLP07196 543 aa30.73■■■□□ 2.51
DENND4B-201ENST00000361217 TRIM26Q12899 539 aaPredicted RBP30.68■■■□□ 2.5
DENND4B-201ENST00000361217 MYT1Q01538 1121 aa30.66■■■□□ 2.5
DENND4B-201ENST00000361217 YTHDC1Q96MU7 727 aaKnown RBP30.6■■■□□ 2.49
DENND4B-201ENST00000361217 PPARGC1BQ86YN6 1023 aaKnown RBP30.46■■■□□ 2.47
DENND4B-201ENST00000361217 HRCP23327 699 aa30.44■■■□□ 2.46
DENND4B-201ENST00000361217 CHIC1Q5VXU3 224 aa30.17■■■□□ 2.42
DENND4B-201ENST00000361217 LOC105371045A0A1W2PR82 267 aa30.08■■■□□ 2.41
DENND4B-201ENST00000361217 ITGAEP38570 1179 aa29.93■■■□□ 2.38
DENND4B-201ENST00000361217 HNRNPUL2Q1KMD3 747 aaKnown RBP29.86■■■□□ 2.37
DENND4B-201ENST00000361217 DAXXQ9UER7 740 aaPredicted RBP29.78■■■□□ 2.36
DENND4B-201ENST00000361217 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP29.74■■■□□ 2.35
DENND4B-201ENST00000361217 POLR3GLQ9BT43 218 aa29.7■■■□□ 2.35
DENND4B-201ENST00000361217 DIEXFQ68CQ4 756 aaKnown RBP29.59■■■□□ 2.33
DENND4B-201ENST00000361217 MYT1LQ9UL68 1186 aa29.57■■■□□ 2.32
DENND4B-201ENST00000361217 CNGB1Q14028 1251 aaPredicted RBP29.3■■■□□ 2.28
DENND4B-201ENST00000361217 FAM50AQ14320 339 aaKnown RBP29.28■■■□□ 2.28
DENND4B-201ENST00000361217 ABCC9O60706 1549 aa29.26■■■□□ 2.27
DENND4B-201ENST00000361217 PABPN1Q86U42 306 aaKnown RBP eCLIP29.2■■■□□ 2.277e-7■■■■□ 25.6
DENND4B-201ENST00000361217 RTL5Q5HYW3 569 aaPredicted RBP29.18■■■□□ 2.26
DENND4B-201ENST00000361217 ZNF316A6NFI3 1004 aaPredicted RBP29.12■■■□□ 2.25
DENND4B-201ENST00000361217 TRIM52Q96A61 297 aa29.11■■■□□ 2.25
DENND4B-201ENST00000361217 SLC4A1APQ9BWU0 796 aaKnown RBP29.07■■■□□ 2.24
DENND4B-201ENST00000361217 NEUROD1Q13562 356 aa29.05■■■□□ 2.24
DENND4B-201ENST00000361217 CLSPNQ9HAW4 1339 aa29.04■■■□□ 2.24
DENND4B-201ENST00000361217 GTF3C3Q9Y5Q9 886 aa28.99■■■□□ 2.23
DENND4B-201ENST00000361217 ANP32CO43423 234 aa28.99■■■□□ 2.23
DENND4B-201ENST00000361217 BCANQ96GW7 911 aa28.82■■■□□ 2.2
DENND4B-201ENST00000361217 CDK11AQ9UQ88 783 aaPredicted RBP28.82■■■□□ 2.2
DENND4B-201ENST00000361217 ZNF326Q5BKZ1 582 aaKnown RBP28.69■■■□□ 2.18
DENND4B-201ENST00000361217 CSRNP3Q8WYN3 585 aa28.68■■■□□ 2.18
DENND4B-201ENST00000361217 ACIN1Q9UKV3 1341 aaKnown RBP28.68■■■□□ 2.18
DENND4B-201ENST00000361217 DCAF1Q9Y4B6 1507 aa28.52■■■□□ 2.16
DENND4B-201ENST00000361217 ZBTB47Q9UFB7 747 aaPredicted RBP28.5■■■□□ 2.15
DENND4B-201ENST00000361217 FBLN2P98095 1184 aa28.48■■■□□ 2.15
DENND4B-201ENST00000361217 P3H3Q8IVL6 736 aa28.47■■■□□ 2.15
DENND4B-201ENST00000361217 CANXP27824 592 aaKnown RBP28.42■■■□□ 2.14
DENND4B-201ENST00000361217 ZCCHC6Q5VYS8 1495 aaKnown RBP28.35■■■□□ 2.13
DENND4B-201ENST00000361217 ARID3CA6NKF2 412 aa28.34■■■□□ 2.13
DENND4B-201ENST00000361217 ANP32AP39687 249 aaKnown RBP28.34■■■□□ 2.13
DENND4B-201ENST00000361217 SCRIBQ14160 1630 aa28.3■■■□□ 2.12
DENND4B-201ENST00000361217 NEFMP07197 916 aa28.27■■■□□ 2.12
DENND4B-201ENST00000361217 TONSLQ96HA7 1378 aa28.23■■■□□ 2.11
DENND4B-201ENST00000361217 ZNF777Q9ULD5 760 aaPredicted RBP28.17■■■□□ 2.1
DENND4B-201ENST00000361217 FKBP8Q14318 412 aa28.14■■■□□ 2.09
DENND4B-201ENST00000361217 NPM2Q86SE8 214 aaKnown RBP28.03■■■□□ 2.08
DENND4B-201ENST00000361217 HNRNPUQ00839 825 aaKnown RBP eCLIP28.01■■■□□ 2.08
DENND4B-201ENST00000361217 SLC24A1O60721 1099 aa28■■■□□ 2.07
DENND4B-201ENST00000361217 DDX10Q13206 875 aaKnown RBP27.99■■■□□ 2.07
DENND4B-201ENST00000361217 CCDC180Q9P1Z9 1646 aa27.98■■■□□ 2.07
DENND4B-201ENST00000361217 BCL11AQ9H165 835 aa27.95■■■□□ 2.06
DENND4B-201ENST00000361217 FAM9BQ8IZU0 186 aa27.9■■■□□ 2.06
DENND4B-201ENST00000361217 UPF2Q9HAU5 1272 aaKnown RBP27.84■■■□□ 2.05
DENND4B-201ENST00000361217 ANP32BQ92688 251 aaKnown RBP27.8■■■□□ 2.04
DENND4B-201ENST00000361217 CLIP1P30622 1438 aa27.77■■■□□ 2.04
DENND4B-201ENST00000361217 TMC1Q8TDI8 760 aa27.76■■■□□ 2.03
DENND4B-201ENST00000361217 GOLGA6L2Q8N9W4 650 aaPredicted RBP27.75■■■□□ 2.03
DENND4B-201ENST00000361217 CCDC136Q96JN2 1154 aa27.74■■■□□ 2.03
DENND4B-201ENST00000361217 CHIC2Q9UKJ5 165 aa27.73■■■□□ 2.03
DENND4B-201ENST00000361217 HSP90AA1P07900 732 aaKnown RBP27.73■■■□□ 2.03
DENND4B-201ENST00000361217 CHGAP10645 457 aaKnown RBP27.7■■■□□ 2.03
DENND4B-201ENST00000361217 EEA1Q15075 1411 aa27.7■■■□□ 2.02
DENND4B-201ENST00000361217 MTUS2Q5JR59 1369 aa27.7■■■□□ 2.02
DENND4B-201ENST00000361217 MIER1Q8N108 512 aa27.68■■■□□ 2.02
DENND4B-201ENST00000361217 ESF1Q9H501 851 aaKnown RBP27.67■■■□□ 2.02
DENND4B-201ENST00000361217 MRS2Q9HD23 443 aa27.67■■■□□ 2.02
DENND4B-201ENST00000361217 GOLGA3Q08378 1498 aa27.65■■■□□ 2.02
DENND4B-201ENST00000361217 STAG3Q9UJ98 1225 aa27.64■■■□□ 2.02
DENND4B-201ENST00000361217 WDR43Q15061 677 aaKnown RBP eCLIP27.64■■■□□ 2.01
DENND4B-201ENST00000361217 SCAF1Q9H7N4 1312 aaKnown RBP27.64■■■□□ 2.01
DENND4B-201ENST00000361217 SALL2Q9Y467 1007 aaPredicted RBP27.62■■■□□ 2.01
DENND4B-201ENST00000361217 MYO15BQ96JP2 1530 aa27.6■■■□□ 2.01
DENND4B-201ENST00000361217 TSPY4P0CV99 314 aa27.59■■■□□ 2.01
DENND4B-201ENST00000361217 TSPY10P0CW01 314 aa27.59■■■□□ 2.01
DENND4B-201ENST00000361217 CEP162Q5TB80 1403 aa27.57■■■□□ 2
DENND4B-201ENST00000361217 GRWD1Q9BQ67 446 aaKnown RBP eCLIP27.56■■■□□ 21e-7■■□□□ 14.1
DENND4B-201ENST00000361217 EIF4G2P78344 907 aaKnown RBP eCLIP27.55■■■□□ 23e-12■■■■□ 24.1
DENND4B-201ENST00000361217 NPM1P06748 294 aaKnown RBP eCLIP27.53■■■□□ 2
DENND4B-201ENST00000361217 RSF1Q96T23 1441 aaPredicted RBP27.51■■□□□ 1.99
DENND4B-201ENST00000361217 EIF5BO60841 1220 aaKnown RBP27.49■■□□□ 1.99
DENND4B-201ENST00000361217 KDM2AQ9Y2K7 1162 aa27.49■■□□□ 1.99
DENND4B-201ENST00000361217 RB1CC1Q8TDY2 1594 aa27.46■■□□□ 1.99
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms