RNA–Protein interactions for RNA: ENST00000404753.7

CAPN10-208, Transcript of calpain 10, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CAPN10, Length 2,570 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN10-208ENST00000404753 NISCHQ9Y2I1 1504 aa45.31■■■■■ 4.84
CAPN10-208ENST00000404753 HRCP23327 699 aa40.29■■■■■ 4.04
CAPN10-208ENST00000404753 PPARGC1BQ86YN6 1023 aaKnown RBP39.61■■■■□ 3.93
CAPN10-208ENST00000404753 PCGF6Q9BYE7 350 aa39.38■■■■□ 3.89
CAPN10-208ENST00000404753 CCDC180Q9P1Z9 1646 aa39.32■■■■□ 3.89
CAPN10-208ENST00000404753 SHROOM4Q9ULL8 1493 aa39.21■■■■□ 3.87
CAPN10-208ENST00000404753 SUPT5HO00267 1087 aaKnown RBP39.18■■■■□ 3.86
CAPN10-208ENST00000404753 PELP1Q8IZL8 1130 aaKnown RBP39.15■■■■□ 3.86
CAPN10-208ENST00000404753 MYO15BQ96JP2 1530 aa39.06■■■■□ 3.84
CAPN10-208ENST00000404753 CHIC1Q5VXU3 224 aa38.65■■■■□ 3.78
CAPN10-208ENST00000404753 SCAF1Q9H7N4 1312 aaKnown RBP38.39■■■■□ 3.74
CAPN10-208ENST00000404753 DCAF1Q9Y4B6 1507 aa38.12■■■■□ 3.69
CAPN10-208ENST00000404753 ZCCHC6Q5VYS8 1495 aaKnown RBP38■■■■□ 3.67
CAPN10-208ENST00000404753 DCAF8L2P0C7V8 631 aa37.99■■■■□ 3.67
CAPN10-208ENST00000404753 TRIM26Q12899 539 aaPredicted RBP37.9■■■■□ 3.66
CAPN10-208ENST00000404753 LOC105371045A0A1W2PR82 267 aa37.9■■■■□ 3.66
CAPN10-208ENST00000404753 ABCC9O60706 1549 aa37.77■■■■□ 3.64
CAPN10-208ENST00000404753 MYT1Q01538 1121 aa37.62■■■■□ 3.61
CAPN10-208ENST00000404753 ZEB1P37275 1124 aaPredicted RBP37.59■■■■□ 3.61
CAPN10-208ENST00000404753 ACIN1Q9UKV3 1341 aaKnown RBP37.25■■■■□ 3.55
CAPN10-208ENST00000404753 NEUROD1Q13562 356 aa37.22■■■■□ 3.55
CAPN10-208ENST00000404753 GTF3C3Q9Y5Q9 886 aa37.02■■■■□ 3.52
CAPN10-208ENST00000404753 NACADO15069 1562 aa36.71■■■■□ 3.47
CAPN10-208ENST00000404753 CENPBP07199 599 aaPredicted RBP36.61■■■■□ 3.45
CAPN10-208ENST00000404753 SCRIBQ14160 1630 aa36.54■■■■□ 3.44
CAPN10-208ENST00000404753 RB1CC1Q8TDY2 1594 aa36.48■■■■□ 3.43
CAPN10-208ENST00000404753 DIEXFQ68CQ4 756 aaKnown RBP36.45■■■■□ 3.43
CAPN10-208ENST00000404753 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP36.39■■■■□ 3.42
CAPN10-208ENST00000404753 FAM9AQ8IZU1 332 aaPredicted RBP36.26■■■■□ 3.4
CAPN10-208ENST00000404753 CCER1Q8TC90 406 aaPredicted RBP36.23■■■■□ 3.39
CAPN10-208ENST00000404753 EHMT2Q96KQ7 1210 aa36.22■■■■□ 3.39
CAPN10-208ENST00000404753 TRIM41Q8WV44 630 aa36.1■■■■□ 3.37
CAPN10-208ENST00000404753 YTHDC1Q96MU7 727 aaKnown RBP35.97■■■■□ 3.35
CAPN10-208ENST00000404753 UNC13AQ9UPW8 1703 aa35.89■■■■□ 3.34
CAPN10-208ENST00000404753 PABPN1Q86U42 306 aaKnown RBP eCLIP35.75■■■■□ 3.31
CAPN10-208ENST00000404753 ZNF316A6NFI3 1004 aaPredicted RBP35.63■■■■□ 3.29
CAPN10-208ENST00000404753 MIER1Q8N108 512 aa35.55■■■■□ 3.28
CAPN10-208ENST00000404753 BICRAQ9NZM4 1560 aa35.51■■■■□ 3.28
CAPN10-208ENST00000404753 BCL11AQ9H165 835 aa35.47■■■■□ 3.27
CAPN10-208ENST00000404753 CECR2Q9BXF3 1484 aa35.43■■■■□ 3.26
CAPN10-208ENST00000404753 TTBK1Q5TCY1 1321 aaPredicted RBP35.42■■■■□ 3.26
CAPN10-208ENST00000404753 RSF1Q96T23 1441 aaPredicted RBP35.4■■■■□ 3.26
CAPN10-208ENST00000404753 ANP32EQ9BTT0 268 aa35.26■■■■□ 3.24
CAPN10-208ENST00000404753 MROH2BQ7Z745 1585 aa35.14■■■■□ 3.22
CAPN10-208ENST00000404753 SUPT16HQ9Y5B9 1047 aaKnown RBP35.14■■■■□ 3.22
CAPN10-208ENST00000404753 TSHZ2Q9NRE2 1034 aa35.09■■■■□ 3.21
CAPN10-208ENST00000404753 CSRNP3Q8WYN3 585 aa34.99■■■■□ 3.19
CAPN10-208ENST00000404753 BAZ1AQ9NRL2 1556 aaPredicted RBP34.93■■■■□ 3.18
CAPN10-208ENST00000404753 WIZO95785 1651 aa34.87■■■■□ 3.17
CAPN10-208ENST00000404753 WRNQ14191 1432 aaPredicted RBP eCLIP34.87■■■■□ 3.17
CAPN10-208ENST00000404753 SMARCA4P51532 1647 aa34.84■■■■□ 3.17
CAPN10-208ENST00000404753 CLSPNQ9HAW4 1339 aa34.8■■■■□ 3.16
CAPN10-208ENST00000404753 CEP162Q5TB80 1403 aa34.67■■■■□ 3.14
CAPN10-208ENST00000404753 HNRNPUL2Q1KMD3 747 aaKnown RBP34.61■■■■□ 3.13
CAPN10-208ENST00000404753 EIF4G1Q04637 1599 aaKnown RBP34.45■■■■□ 3.11
CAPN10-208ENST00000404753 BCANQ96GW7 911 aa34.4■■■■□ 3.1
CAPN10-208ENST00000404753 TNIKQ9UKE5 1360 aa34.35■■■■□ 3.09
CAPN10-208ENST00000404753 ATAD2BQ9ULI0 1458 aa34.34■■■■□ 3.09
CAPN10-208ENST00000404753 TOP2AP11388 1531 aaKnown RBP34.3■■■■□ 3.08
CAPN10-208ENST00000404753 PEG3Q9GZU2 1588 aa34.26■■■■□ 3.08
CAPN10-208ENST00000404753 CCDC88BA6NC98 1476 aa34.26■■■■□ 3.08
CAPN10-208ENST00000404753 UBTFP17480 764 aaKnown RBP34.23■■■■□ 3.07
CAPN10-208ENST00000404753 RBM19Q9Y4C8 960 aaKnown RBP34.22■■■■□ 3.07
CAPN10-208ENST00000404753 ABCC8Q09428 1581 aa34.21■■■■□ 3.07
CAPN10-208ENST00000404753 PRKCSHP14314 528 aaPredicted RBP34.2■■■■□ 3.07
CAPN10-208ENST00000404753 SOGA1O94964 1423 aa34.19■■■■□ 3.06
CAPN10-208ENST00000404753 KCNH8Q96L42 1107 aa34.18■■■■□ 3.06
CAPN10-208ENST00000404753 SMARCA2P51531 1590 aa34.18■■■■□ 3.06
CAPN10-208ENST00000404753 BAZ1BQ9UIG0 1483 aaKnown RBP34.15■■■■□ 3.06
CAPN10-208ENST00000404753 FKBP8Q14318 412 aa34.14■■■■□ 3.06
CAPN10-208ENST00000404753 MSH5O43196 834 aa34.02■■■■□ 3.04
CAPN10-208ENST00000404753 CC2D2AQ9P2K1 1620 aa34.02■■■■□ 3.04
CAPN10-208ENST00000404753 RUSC2Q8N2Y8 1516 aa34.01■■■■□ 3.03
CAPN10-208ENST00000404753 NCAPD3P42695 1498 aa33.96■■■■□ 3.03
CAPN10-208ENST00000404753 ITGAEP38570 1179 aa33.9■■■■□ 3.02
CAPN10-208ENST00000404753 DHX57Q6P158 1386 aaKnown RBP33.9■■■■□ 3.02
CAPN10-208ENST00000404753 HMGXB3Q12766 1538 aa33.83■■■■□ 3.01
CAPN10-208ENST00000404753 GOLGA3Q08378 1498 aa33.83■■■■□ 3.01
CAPN10-208ENST00000404753 EEA1Q15075 1411 aa33.75■■■□□ 2.99
CAPN10-208ENST00000404753 CLIP1P30622 1438 aa33.69■■■□□ 2.98
CAPN10-208ENST00000404753 NEFLP07196 543 aa33.68■■■□□ 2.98
CAPN10-208ENST00000404753 APLP2Q06481 763 aa33.67■■■□□ 2.98
CAPN10-208ENST00000404753 VPS8Q8N3P4 1428 aa33.63■■■□□ 2.97
CAPN10-208ENST00000404753 DNAJC5BQ9UF47 199 aa33.61■■■□□ 2.97
CAPN10-208ENST00000404753 TRIM52Q96A61 297 aa33.53■■■□□ 2.96
CAPN10-208ENST00000404753 FANCIQ9NVI1 1328 aa33.53■■■□□ 2.96
CAPN10-208ENST00000404753 ERICH6Q7L0X2 663 aa33.52■■■□□ 2.96
CAPN10-208ENST00000404753 RANGAP1P46060 587 aaPredicted RBP33.51■■■□□ 2.96
CAPN10-208ENST00000404753 DDX10Q13206 875 aaKnown RBP33.49■■■□□ 2.95
CAPN10-208ENST00000404753 CEP164Q9UPV0 1460 aa33.42■■■□□ 2.94
CAPN10-208ENST00000404753 DEKP35659 375 aaKnown RBP33.42■■■□□ 2.94
CAPN10-208ENST00000404753 ANO8Q9HCE9 1232 aaPredicted RBP33.33■■■□□ 2.93
CAPN10-208ENST00000404753 KIF21BO75037 1637 aa33.29■■■□□ 2.92
CAPN10-208ENST00000404753 CDK11AQ9UQ88 783 aaPredicted RBP33.27■■■□□ 2.92
CAPN10-208ENST00000404753 KANK4Q5T7N3 995 aaPredicted RBP33.25■■■□□ 2.91
CAPN10-208ENST00000404753 IRX6P78412 446 aaPredicted RBP33.24■■■□□ 2.91
CAPN10-208ENST00000404753 CFTRP13569 1480 aa33.23■■■□□ 2.91
CAPN10-208ENST00000404753 PPP1R15AO75807 674 aaPredicted RBP33.22■■■□□ 2.91
CAPN10-208ENST00000404753 MYT1LQ9UL68 1186 aa33.21■■■□□ 2.91
CAPN10-208ENST00000404753 RAPGEF2Q9Y4G8 1499 aa33.2■■■□□ 2.9
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms