RNA–Protein interactions for RNA: ENST00000356713.4

CNNM1-201, Transcript of cyclin and CBS domain divalent metal cation transport mediator 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CNNM1, Length 5,959 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNNM1-201ENST00000356713 DCAF8L2P0C7V8 631 aa34.88■■■■□ 3.17
CNNM1-201ENST00000356713 SUPT5HO00267 1087 aaKnown RBP32.86■■■□□ 2.85
CNNM1-201ENST00000356713 EHMT2Q96KQ7 1210 aa32.52■■■□□ 2.8
CNNM1-201ENST00000356713 SHROOM4Q9ULL8 1493 aa32.12■■■□□ 2.73
CNNM1-201ENST00000356713 PELP1Q8IZL8 1130 aaKnown RBP31.99■■■□□ 2.71
CNNM1-201ENST00000356713 APLP2Q06481 763 aa31.65■■■□□ 2.66
CNNM1-201ENST00000356713 TTBK1Q5TCY1 1321 aaPredicted RBP31.42■■■□□ 2.62
CNNM1-201ENST00000356713 FAM9AQ8IZU1 332 aaPredicted RBP31.23■■■□□ 2.59
CNNM1-201ENST00000356713 NISCHQ9Y2I1 1504 aa31.14■■■□□ 2.58
CNNM1-201ENST00000356713 RANGAP1P46060 587 aaPredicted RBP31.01■■■□□ 2.55
CNNM1-201ENST00000356713 ERICH6Q7L0X2 663 aa30.97■■■□□ 2.55
CNNM1-201ENST00000356713 PCGF6Q9BYE7 350 aa30.89■■■□□ 2.53
CNNM1-201ENST00000356713 ATP1B4Q9UN42 357 aaPredicted RBP30.77■■■□□ 2.52
CNNM1-201ENST00000356713 CCER1Q8TC90 406 aaPredicted RBP30.6■■■□□ 2.49
CNNM1-201ENST00000356713 CENPBP07199 599 aaPredicted RBP30.53■■■□□ 2.48
CNNM1-201ENST00000356713 TRIM41Q8WV44 630 aa30.25■■■□□ 2.43
CNNM1-201ENST00000356713 YTHDC1Q96MU7 727 aaKnown RBP30.22■■■□□ 2.43
CNNM1-201ENST00000356713 UBTFP17480 764 aaKnown RBP30.18■■■□□ 2.42
CNNM1-201ENST00000356713 ZEB1P37275 1124 aaPredicted RBP30.17■■■□□ 2.42
CNNM1-201ENST00000356713 NEFLP07196 543 aa30.16■■■□□ 2.42
CNNM1-201ENST00000356713 PPARGC1BQ86YN6 1023 aaKnown RBP29.87■■■□□ 2.37
CNNM1-201ENST00000356713 MYT1LQ9UL68 1186 aa29.76■■■□□ 2.35
CNNM1-201ENST00000356713 POLR3GLQ9BT43 218 aa29.7■■■□□ 2.35
CNNM1-201ENST00000356713 MYT1Q01538 1121 aa29.63■■■□□ 2.33
CNNM1-201ENST00000356713 DAXXQ9UER7 740 aaPredicted RBP29.57■■■□□ 2.32
CNNM1-201ENST00000356713 ITGAEP38570 1179 aa29.55■■■□□ 2.32
CNNM1-201ENST00000356713 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP29.54■■■□□ 2.32
CNNM1-201ENST00000356713 HNRNPUL2Q1KMD3 747 aaKnown RBP29.54■■■□□ 2.32
CNNM1-201ENST00000356713 CNGB1Q14028 1251 aaPredicted RBP29.49■■■□□ 2.31
CNNM1-201ENST00000356713 CHIC1Q5VXU3 224 aa29.43■■■□□ 2.3
CNNM1-201ENST00000356713 SLC4A1APQ9BWU0 796 aaKnown RBP29.25■■■□□ 2.27
CNNM1-201ENST00000356713 TRIM26Q12899 539 aaPredicted RBP29.14■■■□□ 2.26
CNNM1-201ENST00000356713 HRCP23327 699 aa28.95■■■□□ 2.22
CNNM1-201ENST00000356713 CLSPNQ9HAW4 1339 aa28.9■■■□□ 2.22
CNNM1-201ENST00000356713 ZNF316A6NFI3 1004 aaPredicted RBP28.87■■■□□ 2.21
CNNM1-201ENST00000356713 LOC105371045A0A1W2PR82 267 aa28.81■■■□□ 2.2
CNNM1-201ENST00000356713 RTL5Q5HYW3 569 aaPredicted RBP28.7■■■□□ 2.19
CNNM1-201ENST00000356713 FAM50AQ14320 339 aaKnown RBP28.61■■■□□ 2.17
CNNM1-201ENST00000356713 TRIM52Q96A61 297 aa28.57■■■□□ 2.16
CNNM1-201ENST00000356713 NEUROD1Q13562 356 aa28.46■■■□□ 2.15
CNNM1-201ENST00000356713 DIEXFQ68CQ4 756 aaKnown RBP28.43■■■□□ 2.14
CNNM1-201ENST00000356713 BCANQ96GW7 911 aa28.39■■■□□ 2.14
CNNM1-201ENST00000356713 BCL11AQ9H165 835 aa28.39■■■□□ 2.14
CNNM1-201ENST00000356713 ZNF326Q5BKZ1 582 aaKnown RBP28.39■■■□□ 2.13
CNNM1-201ENST00000356713 SLC24A1O60721 1099 aa28.37■■■□□ 2.13
CNNM1-201ENST00000356713 ZBTB47Q9UFB7 747 aaPredicted RBP28.31■■■□□ 2.12
CNNM1-201ENST00000356713 CANXP27824 592 aaKnown RBP28.13■■■□□ 2.09
CNNM1-201ENST00000356713 FBLN2P98095 1184 aa28.11■■■□□ 2.09
CNNM1-201ENST00000356713 ANP32CO43423 234 aa28.09■■■□□ 2.09
CNNM1-201ENST00000356713 CDK11AQ9UQ88 783 aaPredicted RBP28.03■■■□□ 2.08
CNNM1-201ENST00000356713 PABPN1Q86U42 306 aaKnown RBP eCLIP28.01■■■□□ 2.08
CNNM1-201ENST00000356713 ARID3CA6NKF2 412 aa27.93■■■□□ 2.06
CNNM1-201ENST00000356713 GTF3C3Q9Y5Q9 886 aa27.92■■■□□ 2.06
CNNM1-201ENST00000356713 NEFMP07197 916 aa27.92■■■□□ 2.06
CNNM1-201ENST00000356713 P3H3Q8IVL6 736 aa27.76■■■□□ 2.03
CNNM1-201ENST00000356713 NPM2Q86SE8 214 aaKnown RBP27.73■■■□□ 2.03
CNNM1-201ENST00000356713 ZNF777Q9ULD5 760 aaPredicted RBP27.71■■■□□ 2.03
CNNM1-201ENST00000356713 PLPPR3Q6T4P5 718 aa27.66■■■□□ 2.02
CNNM1-201ENST00000356713 ABCC9O60706 1549 aa27.62■■■□□ 2.01
CNNM1-201ENST00000356713 ANP32AP39687 249 aaKnown RBP27.61■■■□□ 2.01
CNNM1-201ENST00000356713 ESF1Q9H501 851 aaKnown RBP27.52■■■□□ 2
CNNM1-201ENST00000356713 CHGAP10645 457 aaKnown RBP27.51■■□□□ 1.99
CNNM1-201ENST00000356713 STAG3Q9UJ98 1225 aa27.46■■□□□ 1.99
CNNM1-201ENST00000356713 HSP90AA1P07900 732 aaKnown RBP27.45■■□□□ 1.99
CNNM1-201ENST00000356713 ANP32BQ92688 251 aaKnown RBP27.39■■□□□ 1.97
CNNM1-201ENST00000356713 SALL2Q9Y467 1007 aaPredicted RBP27.33■■□□□ 1.97
CNNM1-201ENST00000356713 EIF5BO60841 1220 aaKnown RBP27.32■■□□□ 1.96
CNNM1-201ENST00000356713 FKBP8Q14318 412 aa27.28■■□□□ 1.96
CNNM1-201ENST00000356713 FAM9BQ8IZU0 186 aa27.25■■□□□ 1.95
CNNM1-201ENST00000356713 ACIN1Q9UKV3 1341 aaKnown RBP27.24■■□□□ 1.95
CNNM1-201ENST00000356713 UPF2Q9HAU5 1272 aaKnown RBP27.23■■□□□ 1.95
CNNM1-201ENST00000356713 HNRNPUQ00839 825 aaKnown RBP eCLIP27.18■■□□□ 1.94
CNNM1-201ENST00000356713 SCAF1Q9H7N4 1312 aaKnown RBP27.17■■□□□ 1.94
CNNM1-201ENST00000356713 TONSLQ96HA7 1378 aa27.17■■□□□ 1.94
CNNM1-201ENST00000356713 ARXQ96QS3 562 aa27.15■■□□□ 1.94
CNNM1-201ENST00000356713 GRWD1Q9BQ67 446 aaKnown RBP eCLIP27.13■■□□□ 1.93
CNNM1-201ENST00000356713 CSRNP3Q8WYN3 585 aa27.13■■□□□ 1.93
CNNM1-201ENST00000356713 A0A0G2JS52 829 aa27.11■■□□□ 1.93
CNNM1-201ENST00000356713 DDX10Q13206 875 aaKnown RBP27.07■■□□□ 1.92
CNNM1-201ENST00000356713 NPM1P06748 294 aaKnown RBP eCLIP27.06■■□□□ 1.92
CNNM1-201ENST00000356713 CHIC2Q9UKJ5 165 aa27.03■■□□□ 1.92
CNNM1-201ENST00000356713 PLEKHG5O94827 1062 aa27.02■■□□□ 1.92
CNNM1-201ENST00000356713 NBR1Q14596 966 aa27.01■■□□□ 1.91
CNNM1-201ENST00000356713 SENP3Q9H4L4 574 aaPredicted RBP27■■□□□ 1.91
CNNM1-201ENST00000356713 ZBTB7CA1YPR0 619 aa26.99■■□□□ 1.91
CNNM1-201ENST00000356713 WDR43Q15061 677 aaKnown RBP eCLIP26.98■■□□□ 1.91
CNNM1-201ENST00000356713 TMC1Q8TDI8 760 aa26.97■■□□□ 1.91
CNNM1-201ENST00000356713 GOLGA6L2Q8N9W4 650 aaPredicted RBP26.96■■□□□ 1.91
CNNM1-201ENST00000356713 CCDC136Q96JN2 1154 aa26.96■■□□□ 1.91
CNNM1-201ENST00000356713 KDM2AQ9Y2K7 1162 aa26.95■■□□□ 1.91
CNNM1-201ENST00000356713 CDK11BP21127 795 aaKnown RBP26.84■■□□□ 1.89
CNNM1-201ENST00000356713 C14orf37Q86TY3 774 aa26.82■■□□□ 1.88
CNNM1-201ENST00000356713 IRX6P78412 446 aaPredicted RBP26.82■■□□□ 1.88
CNNM1-201ENST00000356713 MYH16Q9H6N6 1097 aa26.81■■□□□ 1.88
CNNM1-201ENST00000356713 MRS2Q9HD23 443 aa26.79■■□□□ 1.88
CNNM1-201ENST00000356713 GLIPR1L2Q4G1C9 344 aa26.74■■□□□ 1.87
CNNM1-201ENST00000356713 HIRIP3Q9BW71 556 aaPredicted RBP26.72■■□□□ 1.87
CNNM1-201ENST00000356713 TSPY4P0CV99 314 aa26.68■■□□□ 1.86
CNNM1-201ENST00000356713 TSPY10P0CW01 314 aa26.68■■□□□ 1.86
CNNM1-201ENST00000356713 PPP1R15AO75807 674 aaPredicted RBP26.63■■□□□ 1.85
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms