RNA–Protein interactions for RNA: ENST00000309415.7

SH3RF3-201, Transcript of SH3 domain containing ring finger 3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SH3RF3, Length 5,803 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3RF3-201ENST00000309415 DCAF8L2P0C7V8 631 aa36.53■■■■□ 3.44
SH3RF3-201ENST00000309415 SUPT5HO00267 1087 aaKnown RBP34.07■■■■□ 3.04
SH3RF3-201ENST00000309415 NISCHQ9Y2I1 1504 aa33.66■■■□□ 2.98
SH3RF3-201ENST00000309415 SHROOM4Q9ULL8 1493 aa33.44■■■□□ 2.94
SH3RF3-201ENST00000309415 EHMT2Q96KQ7 1210 aa33.27■■■□□ 2.92
SH3RF3-201ENST00000309415 APLP2Q06481 763 aa32.9■■■□□ 2.86
SH3RF3-201ENST00000309415 FAM9AQ8IZU1 332 aaPredicted RBP32.86■■■□□ 2.85
SH3RF3-201ENST00000309415 PELP1Q8IZL8 1130 aaKnown RBP32.46■■■□□ 2.79
SH3RF3-201ENST00000309415 TTBK1Q5TCY1 1321 aaPredicted RBP32.09■■■□□ 2.73
SH3RF3-201ENST00000309415 RANGAP1P46060 587 aaPredicted RBP32■■■□□ 2.71
SH3RF3-201ENST00000309415 ATP1B4Q9UN42 357 aaPredicted RBP31.91■■■□□ 2.7
SH3RF3-201ENST00000309415 TRIM41Q8WV44 630 aa31.59■■■□□ 2.65
SH3RF3-201ENST00000309415 PCGF6Q9BYE7 350 aa31.55■■■□□ 2.64
SH3RF3-201ENST00000309415 UBTFP17480 764 aaKnown RBP31.44■■■□□ 2.62
SH3RF3-201ENST00000309415 CCER1Q8TC90 406 aaPredicted RBP31.24■■■□□ 2.59
SH3RF3-201ENST00000309415 ERICH6Q7L0X2 663 aa31.13■■■□□ 2.57
SH3RF3-201ENST00000309415 ZEB1P37275 1124 aaPredicted RBP31.04■■■□□ 2.56
SH3RF3-201ENST00000309415 MYT1LQ9UL68 1186 aa31.04■■■□□ 2.56
SH3RF3-201ENST00000309415 CENPBP07199 599 aaPredicted RBP31.02■■■□□ 2.56
SH3RF3-201ENST00000309415 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP30.87■■■□□ 2.53
SH3RF3-201ENST00000309415 HNRNPUL2Q1KMD3 747 aaKnown RBP30.87■■■□□ 2.53
SH3RF3-201ENST00000309415 NEFLP07196 543 aa30.73■■■□□ 2.51
SH3RF3-201ENST00000309415 PPARGC1BQ86YN6 1023 aaKnown RBP30.56■■■□□ 2.48
SH3RF3-201ENST00000309415 ITGAEP38570 1179 aa30.48■■■□□ 2.47
SH3RF3-201ENST00000309415 YTHDC1Q96MU7 727 aaKnown RBP30.47■■■□□ 2.47
SH3RF3-201ENST00000309415 POLR3GLQ9BT43 218 aa30.45■■■□□ 2.46
SH3RF3-201ENST00000309415 CHIC1Q5VXU3 224 aa30.39■■■□□ 2.46
SH3RF3-201ENST00000309415 SLC4A1APQ9BWU0 796 aaKnown RBP30.14■■■□□ 2.42
SH3RF3-201ENST00000309415 TRIM26Q12899 539 aaPredicted RBP30.05■■■□□ 2.4
SH3RF3-201ENST00000309415 DAXXQ9UER7 740 aaPredicted RBP30.04■■■□□ 2.4
SH3RF3-201ENST00000309415 CNGB1Q14028 1251 aaPredicted RBP30.03■■■□□ 2.4
SH3RF3-201ENST00000309415 PABPN1Q86U42 306 aaKnown RBP eCLIP29.88■■■□□ 2.37
SH3RF3-201ENST00000309415 ABCC9O60706 1549 aa29.8■■■□□ 2.36
SH3RF3-201ENST00000309415 LOC105371045A0A1W2PR82 267 aa29.73■■■□□ 2.35
SH3RF3-201ENST00000309415 FAM50AQ14320 339 aaKnown RBP29.72■■■□□ 2.35
SH3RF3-201ENST00000309415 TRIM52Q96A61 297 aa29.67■■■□□ 2.34
SH3RF3-201ENST00000309415 FBLN2P98095 1184 aa29.66■■■□□ 2.34
SH3RF3-201ENST00000309415 HRCP23327 699 aa29.49■■■□□ 2.31
SH3RF3-201ENST00000309415 CLSPNQ9HAW4 1339 aa29.47■■■□□ 2.31
SH3RF3-201ENST00000309415 BCANQ96GW7 911 aa29.34■■■□□ 2.29
SH3RF3-201ENST00000309415 NEUROD1Q13562 356 aa29.32■■■□□ 2.28
SH3RF3-201ENST00000309415 ZNF326Q5BKZ1 582 aaKnown RBP29.32■■■□□ 2.28
SH3RF3-201ENST00000309415 ZNF316A6NFI3 1004 aaPredicted RBP29.28■■■□□ 2.28
SH3RF3-201ENST00000309415 MYT1Q01538 1121 aa29.19■■■□□ 2.26
SH3RF3-201ENST00000309415 SLC24A1O60721 1099 aa29.19■■■□□ 2.26
SH3RF3-201ENST00000309415 ZBTB47Q9UFB7 747 aaPredicted RBP29.15■■■□□ 2.26
SH3RF3-201ENST00000309415 ARID3CA6NKF2 412 aa29.09■■■□□ 2.25
SH3RF3-201ENST00000309415 ESF1Q9H501 851 aaKnown RBP29.04■■■□□ 2.24
SH3RF3-201ENST00000309415 NEFMP07197 916 aa29.02■■■□□ 2.24
SH3RF3-201ENST00000309415 P3H3Q8IVL6 736 aa29■■■□□ 2.23
SH3RF3-201ENST00000309415 DIEXFQ68CQ4 756 aaKnown RBP29■■■□□ 2.23
SH3RF3-201ENST00000309415 RTL5Q5HYW3 569 aaPredicted RBP28.97■■■□□ 2.23
SH3RF3-201ENST00000309415 ZNF777Q9ULD5 760 aaPredicted RBP28.96■■■□□ 2.23
SH3RF3-201ENST00000309415 ANP32CO43423 234 aa28.92■■■□□ 2.22
SH3RF3-201ENST00000309415 CANXP27824 592 aaKnown RBP28.88■■■□□ 2.21
SH3RF3-201ENST00000309415 CDK11AQ9UQ88 783 aaPredicted RBP28.87■■■□□ 2.21
SH3RF3-201ENST00000309415 BCL11AQ9H165 835 aa28.82■■■□□ 2.2
SH3RF3-201ENST00000309415 NPM1P06748 294 aaKnown RBP eCLIP28.81■■■□□ 2.2
SH3RF3-201ENST00000309415 PLPPR3Q6T4P5 718 aa28.8■■■□□ 2.2
SH3RF3-201ENST00000309415 STAG3Q9UJ98 1225 aa28.79■■■□□ 2.2
SH3RF3-201ENST00000309415 CHGAP10645 457 aaKnown RBP28.68■■■□□ 2.18
SH3RF3-201ENST00000309415 CSRNP3Q8WYN3 585 aa28.63■■■□□ 2.17
SH3RF3-201ENST00000309415 SCRIBQ14160 1630 aa28.44■■■□□ 2.14
SH3RF3-201ENST00000309415 GRWD1Q9BQ67 446 aaKnown RBP eCLIP28.31■■■□□ 2.12
SH3RF3-201ENST00000309415 TONSLQ96HA7 1378 aa28.26■■■□□ 2.11
SH3RF3-201ENST00000309415 SCAF1Q9H7N4 1312 aaKnown RBP28.23■■■□□ 2.11
SH3RF3-201ENST00000309415 CHMP7Q8WUX9 453 aaPredicted RBP28.23■■■□□ 2.11
SH3RF3-201ENST00000309415 TSPY4P0CV99 314 aa28.15■■■□□ 2.1
SH3RF3-201ENST00000309415 TSPY10P0CW01 314 aa28.15■■■□□ 2.1
SH3RF3-201ENST00000309415 CHIC2Q9UKJ5 165 aa28.15■■■□□ 2.1
SH3RF3-201ENST00000309415 GTF3C3Q9Y5Q9 886 aa28.12■■■□□ 2.09
SH3RF3-201ENST00000309415 A0A0G2JS52 829 aa28.08■■■□□ 2.09
SH3RF3-201ENST00000309415 ANP32AP39687 249 aaKnown RBP28.06■■■□□ 2.08
SH3RF3-201ENST00000309415 HSP90AA1P07900 732 aaKnown RBP28.01■■■□□ 2.07
SH3RF3-201ENST00000309415 NPM2Q86SE8 214 aaKnown RBP28.01■■■□□ 2.07
SH3RF3-201ENST00000309415 PPP1R15AO75807 674 aaPredicted RBP27.97■■■□□ 2.07
SH3RF3-201ENST00000309415 KDM2AQ9Y2K7 1162 aa27.97■■■□□ 2.07
SH3RF3-201ENST00000309415 ZBTB7CA1YPR0 619 aa27.95■■■□□ 2.07
SH3RF3-201ENST00000309415 MTUS2Q5JR59 1369 aa27.95■■■□□ 2.06
SH3RF3-201ENST00000309415 C14orf37Q86TY3 774 aa27.93■■■□□ 2.06
SH3RF3-201ENST00000309415 UPF2Q9HAU5 1272 aaKnown RBP27.93■■■□□ 2.06
SH3RF3-201ENST00000309415 FAM9BQ8IZU0 186 aa27.93■■■□□ 2.06
SH3RF3-201ENST00000309415 WDR43Q15061 677 aaKnown RBP eCLIP27.92■■■□□ 2.06
SH3RF3-201ENST00000309415 SALL2Q9Y467 1007 aaPredicted RBP27.92■■■□□ 2.06
SH3RF3-201ENST00000309415 KCNH8Q96L42 1107 aa27.92■■■□□ 2.06
SH3RF3-201ENST00000309415 PLEKHG5O94827 1062 aa27.89■■■□□ 2.06
SH3RF3-201ENST00000309415 TMC1Q8TDI8 760 aa27.87■■■□□ 2.05
SH3RF3-201ENST00000309415 HNRNPUQ00839 825 aaKnown RBP eCLIP27.86■■■□□ 2.05
SH3RF3-201ENST00000309415 ARID4BQ4LE39 1312 aaPredicted RBP27.86■■■□□ 2.05
SH3RF3-201ENST00000309415 SENP3Q9H4L4 574 aaPredicted RBP27.85■■■□□ 2.05
SH3RF3-201ENST00000309415 ANP32BQ92688 251 aaKnown RBP27.84■■■□□ 2.05
SH3RF3-201ENST00000309415 GOLGA6L2Q8N9W4 650 aaPredicted RBP27.82■■■□□ 2.04
SH3RF3-201ENST00000309415 DDX10Q13206 875 aaKnown RBP27.81■■■□□ 2.04
SH3RF3-201ENST00000309415 HAP1P54257 671 aaPredicted RBP27.79■■■□□ 2.04
SH3RF3-201ENST00000309415 PLEKHD1A6NEE1 506 aa27.77■■■□□ 2.04
SH3RF3-201ENST00000309415 FKBP8Q14318 412 aa27.7■■■□□ 2.02
SH3RF3-201ENST00000309415 MYH16Q9H6N6 1097 aa27.69■■■□□ 2.02
SH3RF3-201ENST00000309415 ZCCHC6Q5VYS8 1495 aaKnown RBP27.68■■■□□ 2.02
SH3RF3-201ENST00000309415 RB1CC1Q8TDY2 1594 aa27.65■■■□□ 2.02
SH3RF3-201ENST00000309415 RRP7BPQ9NSQ0 103 aa27.65■■■□□ 2.02
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms