RNA–Protein interactions for RNA: ENST00000396832.5

CSNK1E-203, Transcript of casein kinase 1 epsilon, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSNK1E, Length 2,791 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-203ENST00000396832 NISCHQ9Y2I1 1504 aa47.42■■■■■ 5.18
CSNK1E-203ENST00000396832 SHROOM4Q9ULL8 1493 aa41.8■■■■■ 4.28
CSNK1E-203ENST00000396832 SUPT5HO00267 1087 aaKnown RBP41.19■■■■■ 4.18
CSNK1E-203ENST00000396832 HRCP23327 699 aa40.26■■■■■ 4.04
CSNK1E-203ENST00000396832 ZCCHC6Q5VYS8 1495 aaKnown RBP40.18■■■■■ 4.02
CSNK1E-203ENST00000396832 DCAF8L2P0C7V8 631 aa40.17■■■■■ 4.02
CSNK1E-203ENST00000396832 MYO15BQ96JP2 1530 aa40.06■■■■■ 4
CSNK1E-203ENST00000396832 CHIC1Q5VXU3 224 aa39.9■■■■□ 3.98
CSNK1E-203ENST00000396832 CCDC180Q9P1Z9 1646 aa39.7■■■■□ 3.95
CSNK1E-203ENST00000396832 PCGF6Q9BYE7 350 aa39.62■■■■□ 3.93
CSNK1E-203ENST00000396832 PPARGC1BQ86YN6 1023 aaKnown RBP39.39■■■■□ 3.9
CSNK1E-203ENST00000396832 LOC105371045A0A1W2PR82 267 aa39.13■■■■□ 3.85
CSNK1E-203ENST00000396832 DCAF1Q9Y4B6 1507 aa38.74■■■■□ 3.79
CSNK1E-203ENST00000396832 PELP1Q8IZL8 1130 aaKnown RBP38.43■■■■□ 3.74
CSNK1E-203ENST00000396832 TRIM26Q12899 539 aaPredicted RBP38.4■■■■□ 3.74
CSNK1E-203ENST00000396832 EHMT2Q96KQ7 1210 aa38.26■■■■□ 3.72
CSNK1E-203ENST00000396832 FAM9AQ8IZU1 332 aaPredicted RBP38.2■■■■□ 3.71
CSNK1E-203ENST00000396832 ABCC9O60706 1549 aa38.08■■■■□ 3.69
CSNK1E-203ENST00000396832 SCRIBQ14160 1630 aa38.03■■■■□ 3.68
CSNK1E-203ENST00000396832 ZEB1P37275 1124 aaPredicted RBP38.01■■■■□ 3.68
CSNK1E-203ENST00000396832 TRIM41Q8WV44 630 aa38.01■■■■□ 3.67
CSNK1E-203ENST00000396832 SCAF1Q9H7N4 1312 aaKnown RBP37.91■■■■□ 3.66
CSNK1E-203ENST00000396832 RSF1Q96T23 1441 aaPredicted RBP37.91■■■■□ 3.66
CSNK1E-203ENST00000396832 RB1CC1Q8TDY2 1594 aa37.78■■■■□ 3.64
CSNK1E-203ENST00000396832 CECR2Q9BXF3 1484 aa37.31■■■■□ 3.56
CSNK1E-203ENST00000396832 MROH2BQ7Z745 1585 aa37.13■■■■□ 3.53
CSNK1E-203ENST00000396832 TTBK1Q5TCY1 1321 aaPredicted RBP37.11■■■■□ 3.53
CSNK1E-203ENST00000396832 ACIN1Q9UKV3 1341 aaKnown RBP37.1■■■■□ 3.53
CSNK1E-203ENST00000396832 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP37.1■■■■□ 3.53
CSNK1E-203ENST00000396832 WIZO95785 1651 aa37.02■■■■□ 3.52
CSNK1E-203ENST00000396832 NEUROD1Q13562 356 aa36.99■■■■□ 3.51
CSNK1E-203ENST00000396832 NACADO15069 1562 aa36.91■■■■□ 3.5
CSNK1E-203ENST00000396832 CCER1Q8TC90 406 aaPredicted RBP36.89■■■■□ 3.5
CSNK1E-203ENST00000396832 MYT1Q01538 1121 aa36.85■■■■□ 3.49
CSNK1E-203ENST00000396832 GTF3C3Q9Y5Q9 886 aa36.77■■■■□ 3.48
CSNK1E-203ENST00000396832 CENPBP07199 599 aaPredicted RBP36.67■■■■□ 3.46
CSNK1E-203ENST00000396832 DIEXFQ68CQ4 756 aaKnown RBP36.62■■■■□ 3.45
CSNK1E-203ENST00000396832 ABCC8Q09428 1581 aa36.58■■■■□ 3.45
CSNK1E-203ENST00000396832 BAZ1AQ9NRL2 1556 aaPredicted RBP36.52■■■■□ 3.44
CSNK1E-203ENST00000396832 CCDC88BA6NC98 1476 aa36.45■■■■□ 3.43
CSNK1E-203ENST00000396832 PABPN1Q86U42 306 aaKnown RBP eCLIP36.44■■■■□ 3.424e-7■■■□□ 17.8
CSNK1E-203ENST00000396832 EIF4G1Q04637 1599 aaKnown RBP36.42■■■■□ 3.42
CSNK1E-203ENST00000396832 SOGA1O94964 1423 aa36.31■■■■□ 3.4
CSNK1E-203ENST00000396832 CEP162Q5TB80 1403 aa36.3■■■■□ 3.4
CSNK1E-203ENST00000396832 UBTFP17480 764 aaKnown RBP36.25■■■■□ 3.39
CSNK1E-203ENST00000396832 RUSC2Q8N2Y8 1516 aa36.16■■■■□ 3.38
CSNK1E-203ENST00000396832 TOP2AP11388 1531 aaKnown RBP36.13■■■■□ 3.37
CSNK1E-203ENST00000396832 SMARCA2P51531 1590 aa36.06■■■■□ 3.36
CSNK1E-203ENST00000396832 WRNQ14191 1432 aaPredicted RBP eCLIP36.04■■■■□ 3.36
CSNK1E-203ENST00000396832 YTHDC1Q96MU7 727 aaKnown RBP36.03■■■■□ 3.36
CSNK1E-203ENST00000396832 SMARCA4P51532 1647 aa36.03■■■■□ 3.36
CSNK1E-203ENST00000396832 CSRNP3Q8WYN3 585 aa36.01■■■■□ 3.36
CSNK1E-203ENST00000396832 UNC13AQ9UPW8 1703 aa36.01■■■■□ 3.35
CSNK1E-203ENST00000396832 ZNF316A6NFI3 1004 aaPredicted RBP35.99■■■■□ 3.35
CSNK1E-203ENST00000396832 TNIKQ9UKE5 1360 aa35.96■■■■□ 3.35
CSNK1E-203ENST00000396832 HNRNPUL2Q1KMD3 747 aaKnown RBP35.95■■■■□ 3.35
CSNK1E-203ENST00000396832 RANGAP1P46060 587 aaPredicted RBP35.91■■■■□ 3.34
CSNK1E-203ENST00000396832 GOLGA3Q08378 1498 aa35.72■■■■□ 3.31
CSNK1E-203ENST00000396832 MIER1Q8N108 512 aa35.7■■■■□ 3.31
CSNK1E-203ENST00000396832 BICRAQ9NZM4 1560 aa35.67■■■■□ 3.3
CSNK1E-203ENST00000396832 EEA1Q15075 1411 aa35.63■■■■□ 3.29
CSNK1E-203ENST00000396832 CLIP1P30622 1438 aa35.48■■■■□ 3.27
CSNK1E-203ENST00000396832 SYNJ1O43426 1573 aa35.48■■■■□ 3.27
CSNK1E-203ENST00000396832 APLP2Q06481 763 aa35.42■■■■□ 3.26
CSNK1E-203ENST00000396832 CEP164Q9UPV0 1460 aa35.4■■■■□ 3.26
CSNK1E-203ENST00000396832 RAPGEF2Q9Y4G8 1499 aa35.32■■■■□ 3.25
CSNK1E-203ENST00000396832 VPS8Q8N3P4 1428 aa35.27■■■■□ 3.24
CSNK1E-203ENST00000396832 KIF21BO75037 1637 aa35.23■■■■□ 3.23
CSNK1E-203ENST00000396832 SUPT16HQ9Y5B9 1047 aaKnown RBP35.07■■■■□ 3.2
CSNK1E-203ENST00000396832 CLSPNQ9HAW4 1339 aa35.05■■■■□ 3.2
CSNK1E-203ENST00000396832 BAZ1BQ9UIG0 1483 aaKnown RBP35.04■■■■□ 3.2
CSNK1E-203ENST00000396832 ATAD2BQ9ULI0 1458 aa35.01■■■■□ 3.19
CSNK1E-203ENST00000396832 KANK4Q5T7N3 995 aaPredicted RBP34.98■■■■□ 3.19
CSNK1E-203ENST00000396832 PEG3Q9GZU2 1588 aa34.98■■■■□ 3.19
CSNK1E-203ENST00000396832 ITGAEP38570 1179 aa34.93■■■■□ 3.18
CSNK1E-203ENST00000396832 DHX57Q6P158 1386 aaKnown RBP34.88■■■■□ 3.17
CSNK1E-203ENST00000396832 TSHZ2Q9NRE2 1034 aa34.85■■■■□ 3.17
CSNK1E-203ENST00000396832 ANP32EQ9BTT0 268 aa34.79■■■■□ 3.16
CSNK1E-203ENST00000396832 ARAP1Q96P48 1450 aa34.78■■■■□ 3.16
CSNK1E-203ENST00000396832 TOP2BQ02880 1626 aa34.75■■■■□ 3.15
CSNK1E-203ENST00000396832 PRXQ9BXM0 1461 aa34.6■■■■□ 3.13
CSNK1E-203ENST00000396832 KCNH8Q96L42 1107 aa34.57■■■■□ 3.12
CSNK1E-203ENST00000396832 BIVM-ERCC5R4GMW8 1640 aa34.53■■■■□ 3.12
CSNK1E-203ENST00000396832 ERICH3Q5RHP9 1530 aa34.51■■■■□ 3.12
CSNK1E-203ENST00000396832 BCL11AQ9H165 835 aa34.48■■■■□ 3.11
CSNK1E-203ENST00000396832 CUX1P39880 1505 aa34.47■■■■□ 3.11
CSNK1E-203ENST00000396832 CCNB3Q8WWL7 1395 aa34.46■■■■□ 3.11
CSNK1E-203ENST00000396832 RRBP1Q9P2E9 1410 aaKnown RBP34.43■■■■□ 3.1
CSNK1E-203ENST00000396832 KIF27Q86VH2 1401 aa34.4■■■■□ 3.1
CSNK1E-203ENST00000396832 ARHGAP35Q9NRY4 1499 aa34.39■■■■□ 3.1
CSNK1E-203ENST00000396832 BCANQ96GW7 911 aa34.35■■■■□ 3.09
CSNK1E-203ENST00000396832 RAB3GAP2Q9H2M9 1393 aa34.33■■■■□ 3.09
CSNK1E-203ENST00000396832 ATP1B4Q9UN42 357 aaPredicted RBP34.3■■■■□ 3.08
CSNK1E-203ENST00000396832 HIRIP3Q9BW71 556 aaPredicted RBP34.28■■■■□ 3.08
CSNK1E-203ENST00000396832 SIN3AQ96ST3 1273 aa34.27■■■■□ 3.08
CSNK1E-203ENST00000396832 P3H3Q8IVL6 736 aa34.26■■■■□ 3.08
CSNK1E-203ENST00000396832 FAM50AQ14320 339 aaKnown RBP34.26■■■■□ 3.07
CSNK1E-203ENST00000396832 NCAPD3P42695 1498 aa34.26■■■■□ 3.07
CSNK1E-203ENST00000396832 DDX10Q13206 875 aaKnown RBP34.23■■■■□ 3.07
CSNK1E-203ENST00000396832 FKBP8Q14318 412 aa34.21■■■■□ 3.07
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms