RNA–Protein interactions for RNA: ENST00000317357.9

SOBP-201, Transcript of sine oculis binding protein homolog, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SOBP, Length 5,245 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOBP-201ENST00000317357 DCAF8L2P0C7V8 631 aa33.8■■■■□ 3
SOBP-201ENST00000317357 SUPT5HO00267 1087 aaKnown RBP32.38■■■□□ 2.77
SOBP-201ENST00000317357 NISCHQ9Y2I1 1504 aa32.33■■■□□ 2.77
SOBP-201ENST00000317357 PELP1Q8IZL8 1130 aaKnown RBP32■■■□□ 2.71
SOBP-201ENST00000317357 EHMT2Q96KQ7 1210 aa31.65■■■□□ 2.66
SOBP-201ENST00000317357 SHROOM4Q9ULL8 1493 aa31.38■■■□□ 2.61
SOBP-201ENST00000317357 APLP2Q06481 763 aa31.11■■■□□ 2.57
SOBP-201ENST00000317357 FAM9AQ8IZU1 332 aaPredicted RBP30.84■■■□□ 2.53
SOBP-201ENST00000317357 PCGF6Q9BYE7 350 aa30.77■■■□□ 2.52
SOBP-201ENST00000317357 ERICH6Q7L0X2 663 aa30.75■■■□□ 2.51
SOBP-201ENST00000317357 TTBK1Q5TCY1 1321 aaPredicted RBP30.67■■■□□ 2.5
SOBP-201ENST00000317357 CENPBP07199 599 aaPredicted RBP30.66■■■□□ 2.5
SOBP-201ENST00000317357 CCER1Q8TC90 406 aaPredicted RBP30.54■■■□□ 2.48
SOBP-201ENST00000317357 ZEB1P37275 1124 aaPredicted RBP30.31■■■□□ 2.44
SOBP-201ENST00000317357 RANGAP1P46060 587 aaPredicted RBP30.1■■■□□ 2.41
SOBP-201ENST00000317357 MYT1Q01538 1121 aa30.05■■■□□ 2.4
SOBP-201ENST00000317357 NEFLP07196 543 aa30.03■■■□□ 2.4
SOBP-201ENST00000317357 YTHDC1Q96MU7 727 aaKnown RBP29.94■■■□□ 2.38
SOBP-201ENST00000317357 TRIM41Q8WV44 630 aa29.86■■■□□ 2.37
SOBP-201ENST00000317357 ATP1B4Q9UN42 357 aaPredicted RBP29.85■■■□□ 2.37
SOBP-201ENST00000317357 UBTFP17480 764 aaKnown RBP29.65■■■□□ 2.34
SOBP-201ENST00000317357 PPARGC1BQ86YN6 1023 aaKnown RBP29.36■■■□□ 2.29
SOBP-201ENST00000317357 DAXXQ9UER7 740 aaPredicted RBP29.3■■■□□ 2.28
SOBP-201ENST00000317357 TRIM26Q12899 539 aaPredicted RBP29.18■■■□□ 2.26
SOBP-201ENST00000317357 HRCP23327 699 aa29.15■■■□□ 2.26
SOBP-201ENST00000317357 POLR3GLQ9BT43 218 aa29.01■■■□□ 2.23
SOBP-201ENST00000317357 ITGAEP38570 1179 aa28.93■■■□□ 2.22
SOBP-201ENST00000317357 CNGB1Q14028 1251 aaPredicted RBP28.8■■■□□ 2.2
SOBP-201ENST00000317357 HNRNPUL2Q1KMD3 747 aaKnown RBP28.72■■■□□ 2.19
SOBP-201ENST00000317357 RTL5Q5HYW3 569 aaPredicted RBP28.71■■■□□ 2.19
SOBP-201ENST00000317357 MYT1LQ9UL68 1186 aa28.68■■■□□ 2.18
SOBP-201ENST00000317357 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP28.65■■■□□ 2.18
SOBP-201ENST00000317357 LOC105371045A0A1W2PR82 267 aa28.61■■■□□ 2.17
SOBP-201ENST00000317357 ZNF316A6NFI3 1004 aaPredicted RBP28.57■■■□□ 2.16
SOBP-201ENST00000317357 CLSPNQ9HAW4 1339 aa28.53■■■□□ 2.16
SOBP-201ENST00000317357 DIEXFQ68CQ4 756 aaKnown RBP28.49■■■□□ 2.15
SOBP-201ENST00000317357 SLC4A1APQ9BWU0 796 aaKnown RBP28.37■■■□□ 2.13
SOBP-201ENST00000317357 CHIC1Q5VXU3 224 aa28.35■■■□□ 2.13
SOBP-201ENST00000317357 ABCC9O60706 1549 aa28.31■■■□□ 2.12
SOBP-201ENST00000317357 BCANQ96GW7 911 aa28.2■■■□□ 2.1
SOBP-201ENST00000317357 GTF3C3Q9Y5Q9 886 aa28.14■■■□□ 2.09
SOBP-201ENST00000317357 FAM50AQ14320 339 aaKnown RBP28.01■■■□□ 2.07
SOBP-201ENST00000317357 CDK11AQ9UQ88 783 aaPredicted RBP28■■■□□ 2.07
SOBP-201ENST00000317357 PABPN1Q86U42 306 aaKnown RBP eCLIP28■■■□□ 2.07
SOBP-201ENST00000317357 NEUROD1Q13562 356 aa27.96■■■□□ 2.07
SOBP-201ENST00000317357 TRIM52Q96A61 297 aa27.95■■■□□ 2.06
SOBP-201ENST00000317357 ANP32CO43423 234 aa27.89■■■□□ 2.06
SOBP-201ENST00000317357 ZBTB47Q9UFB7 747 aaPredicted RBP27.83■■■□□ 2.05
SOBP-201ENST00000317357 ZNF326Q5BKZ1 582 aaKnown RBP27.76■■■□□ 2.03
SOBP-201ENST00000317357 BCL11AQ9H165 835 aa27.65■■■□□ 2.02
SOBP-201ENST00000317357 CANXP27824 592 aaKnown RBP27.63■■■□□ 2.01
SOBP-201ENST00000317357 ANP32AP39687 249 aaKnown RBP27.59■■■□□ 2.01
SOBP-201ENST00000317357 ACIN1Q9UKV3 1341 aaKnown RBP27.58■■■□□ 2.01
SOBP-201ENST00000317357 EIF5BO60841 1220 aaKnown RBP27.46■■□□□ 1.99
SOBP-201ENST00000317357 SLC24A1O60721 1099 aa27.46■■□□□ 1.99
SOBP-201ENST00000317357 NPM2Q86SE8 214 aaKnown RBP27.46■■□□□ 1.99
SOBP-201ENST00000317357 NEFMP07197 916 aa27.42■■□□□ 1.98
SOBP-201ENST00000317357 ANP32BQ92688 251 aaKnown RBP27.27■■□□□ 1.96
SOBP-201ENST00000317357 FKBP8Q14318 412 aa27.25■■□□□ 1.95
SOBP-201ENST00000317357 HSP90AA1P07900 732 aaKnown RBP27.18■■□□□ 1.94
SOBP-201ENST00000317357 FBLN2P98095 1184 aa27.18■■□□□ 1.94
SOBP-201ENST00000317357 UPF2Q9HAU5 1272 aaKnown RBP27.07■■□□□ 1.92
SOBP-201ENST00000317357 HNRNPUQ00839 825 aaKnown RBP eCLIP27.07■■□□□ 1.92
SOBP-201ENST00000317357 GLIPR1L2Q4G1C9 344 aa27.05■■□□□ 1.92
SOBP-201ENST00000317357 P3H3Q8IVL6 736 aa27.04■■□□□ 1.92
SOBP-201ENST00000317357 ARID3CA6NKF2 412 aa27.03■■□□□ 1.92
SOBP-201ENST00000317357 FAM9BQ8IZU0 186 aa26.96■■□□□ 1.91
SOBP-201ENST00000317357 NBR1Q14596 966 aa26.95■■□□□ 1.91
SOBP-201ENST00000317357 ZNF777Q9ULD5 760 aaPredicted RBP26.94■■□□□ 1.9
SOBP-201ENST00000317357 ESF1Q9H501 851 aaKnown RBP26.93■■□□□ 1.9
SOBP-201ENST00000317357 DDX10Q13206 875 aaKnown RBP26.92■■□□□ 1.9
SOBP-201ENST00000317357 CSRNP3Q8WYN3 585 aa26.91■■□□□ 1.9
SOBP-201ENST00000317357 SALL2Q9Y467 1007 aaPredicted RBP26.9■■□□□ 1.9
SOBP-201ENST00000317357 CCDC136Q96JN2 1154 aa26.89■■□□□ 1.9
SOBP-201ENST00000317357 TONSLQ96HA7 1378 aa26.89■■□□□ 1.9
SOBP-201ENST00000317357 ARXQ96QS3 562 aa26.86■■□□□ 1.89
SOBP-201ENST00000317357 SCRIBQ14160 1630 aa26.86■■□□□ 1.89
SOBP-201ENST00000317357 CCDC180Q9P1Z9 1646 aa26.84■■□□□ 1.89
SOBP-201ENST00000317357 GOLGA6L2Q8N9W4 650 aaPredicted RBP26.78■■□□□ 1.88
SOBP-201ENST00000317357 TMC1Q8TDI8 760 aa26.74■■□□□ 1.87
SOBP-201ENST00000317357 CHGAP10645 457 aaKnown RBP26.71■■□□□ 1.87
SOBP-201ENST00000317357 ZCCHC6Q5VYS8 1495 aaKnown RBP26.71■■□□□ 1.87
SOBP-201ENST00000317357 STAG3Q9UJ98 1225 aa26.71■■□□□ 1.87
SOBP-201ENST00000317357 NPM1P06748 294 aaKnown RBP eCLIP26.66■■□□□ 1.86
SOBP-201ENST00000317357 MRS2Q9HD23 443 aa26.63■■□□□ 1.85
SOBP-201ENST00000317357 IRX6P78412 446 aaPredicted RBP26.61■■□□□ 1.85
SOBP-201ENST00000317357 WDR43Q15061 677 aaKnown RBP eCLIP26.58■■□□□ 1.84
SOBP-201ENST00000317357 SCAF1Q9H7N4 1312 aaKnown RBP26.57■■□□□ 1.84
SOBP-201ENST00000317357 MIER1Q8N108 512 aa26.51■■□□□ 1.83
SOBP-201ENST00000317357 RB1CC1Q8TDY2 1594 aa26.49■■□□□ 1.83
SOBP-201ENST00000317357 CHIC2Q9UKJ5 165 aa26.47■■□□□ 1.83
SOBP-201ENST00000317357 TRIM44Q96DX7 344 aaPredicted RBP26.41■■□□□ 1.82
SOBP-201ENST00000317357 MYH16Q9H6N6 1097 aa26.4■■□□□ 1.82
SOBP-201ENST00000317357 GRWD1Q9BQ67 446 aaKnown RBP eCLIP26.39■■□□□ 1.824e-6■□□□□ 9.1
SOBP-201ENST00000317357 KDM2AQ9Y2K7 1162 aa26.39■■□□□ 1.81
SOBP-201ENST00000317357 HIRIP3Q9BW71 556 aaPredicted RBP26.38■■□□□ 1.81
SOBP-201ENST00000317357 BECN1Q14457 450 aa26.37■■□□□ 1.81
SOBP-201ENST00000317357 TSPY4P0CV99 314 aa26.36■■□□□ 1.81
SOBP-201ENST00000317357 TSPY10P0CW01 314 aa26.36■■□□□ 1.81
SOBP-201ENST00000317357 DDRGK1Q96HY6 314 aa26.36■■□□□ 1.81
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms