Protein–RNA interactions for Protein: Q9H078

CLPB, Caseinolytic peptidase B protein homolog, humanhuman

Predictions only

Length 707 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLPBQ9H078 MAD2L2-205ENST00000376669 864 ntTSL 3 BASIC26.36■■□□□ 1.81
CLPBQ9H078 VAX2-201ENST00000234392 1147 ntAPPRIS P1 TSL 1 (best) BASIC26.35■■□□□ 1.81
CLPBQ9H078 NME2-202ENST00000393190 866 ntAPPRIS P1 TSL 1 (best) BASIC26.35■■□□□ 1.81
CLPBQ9H078 GLRB-203ENST00000509282 1757 ntAPPRIS P1 TSL 1 (best) BASIC26.35■■□□□ 1.81
CLPBQ9H078 NPTXR-202ENST00000640136 1503 ntAPPRIS P2 TSL 1 (best) BASIC26.34■■□□□ 1.81
CLPBQ9H078 MFAP2-202ENST00000375535 1260 ntTSL 1 (best) BASIC26.34■■□□□ 1.81
CLPBQ9H078 HDAC11-206ENST00000405025 576 ntTSL 4 BASIC26.34■■□□□ 1.81
CLPBQ9H078 PABPC1L2B-AS1-201ENST00000416989 1167 ntTSL 3 BASIC26.34■■□□□ 1.81
CLPBQ9H078 AL662864.1-201ENST00000454388 1167 ntTSL 3 BASIC26.34■■□□□ 1.81
CLPBQ9H078 UBE2L6-201ENST00000287156 1354 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.81
CLPBQ9H078 COL13A1-210ENST00000517713 2007 ntAPPRIS ALT2 TSL 5 BASIC26.33■■□□□ 1.81
CLPBQ9H078 AC004540.2-201ENST00000451368 611 ntTSL 2 BASIC26.33■■□□□ 1.81
CLPBQ9H078 UBALD1-202ENST00000587615 799 ntTSL 2 BASIC26.32■■□□□ 1.8
CLPBQ9H078 LZTS2-201ENST00000370220 5741 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
CLPBQ9H078 GLTP-201ENST00000318348 2356 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
CLPBQ9H078 ABCB10P1-201ENST00000614297 2181 ntBASIC26.31■■□□□ 1.8
CLPBQ9H078 PVT1-219ENST00000523427 938 ntTSL 3 BASIC26.31■■□□□ 1.8
CLPBQ9H078 XKR6-201ENST00000297303 1550 ntTSL 1 (best) BASIC26.31■■□□□ 1.8
CLPBQ9H078 PI4KAP2-202ENST00000450651 2294 ntTSL 5 BASIC26.31■■□□□ 1.8
CLPBQ9H078 AGAP3-216ENST00000479901 1881 ntTSL 5 BASIC26.3■■□□□ 1.8
CLPBQ9H078 LDB1-202ENST00000425280 2089 ntTSL 5 BASIC26.29■■□□□ 1.8
CLPBQ9H078 AC012615.2-201ENST00000586259 447 ntTSL 4 BASIC26.29■■□□□ 1.8
CLPBQ9H078 ARHGDIG-201ENST00000219409 949 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
CLPBQ9H078 ZNRF2P2-203ENST00000454624 420 ntBASIC26.28■■□□□ 1.8
CLPBQ9H078 TXNL4A-210ENST00000591711 669 ntTSL 2 BASIC26.28■■□□□ 1.8
CLPBQ9H078 HGH1-207ENST00000628266 258 ntTSL 5 BASIC26.28■■□□□ 1.8
CLPBQ9H078 STUB1-201ENST00000219548 1472 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
CLPBQ9H078 AL135925.1-201ENST00000605920 1701 ntBASIC26.28■■□□□ 1.8
CLPBQ9H078 PDCD2-209ENST00000542896 1082 ntTSL 2 BASIC26.26■■□□□ 1.79
CLPBQ9H078 GKAP1-203ENST00000376371 1778 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
CLPBQ9H078 LSM14B-204ENST00000370915 1079 ntTSL 1 (best) BASIC26.25■■□□□ 1.79
CLPBQ9H078 ST7-AS1-201ENST00000456775 1889 ntBASIC26.25■■□□□ 1.79
CLPBQ9H078 SLC35D2-202ENST00000375257 889 ntTSL 2 BASIC26.24■■□□□ 1.79
CLPBQ9H078 ZNF513-201ENST00000323703 2139 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
CLPBQ9H078 RCE1-201ENST00000309657 1485 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
CLPBQ9H078 NOP53-201ENST00000246802 1528 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
CLPBQ9H078 ARL8A-201ENST00000272217 1793 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
CLPBQ9H078 TSPAN33-201ENST00000486685 1863 ntAPPRIS P1 TSL 1 (best) BASIC26.22■■□□□ 1.79
CLPBQ9H078 BTBD19-203ENST00000450269 1572 ntAPPRIS P1 TSL 5 BASIC26.21■■□□□ 1.79
CLPBQ9H078 AL139393.1-201ENST00000417479 573 ntTSL 5 BASIC26.21■■□□□ 1.79
CLPBQ9H078 DUX4L29-201ENST00000425409 679 ntBASIC26.21■■□□□ 1.79
CLPBQ9H078 PIK3R2-208ENST00000617642 1446 ntTSL 5 BASIC26.21■■□□□ 1.79
CLPBQ9H078 CIB1-201ENST00000328649 1247 ntAPPRIS P1 TSL 1 (best) BASIC26.2■■□□□ 1.78
CLPBQ9H078 CIB1-202ENST00000612800 1096 ntTSL 1 (best) BASIC26.2■■□□□ 1.78
CLPBQ9H078 MIR6090-201ENST00000622481 60 ntBASIC26.2■■□□□ 1.78
CLPBQ9H078 GGA1-204ENST00000381756 2107 ntTSL 1 (best) BASIC26.2■■□□□ 1.78
CLPBQ9H078 GAL3ST1-205ENST00000406361 1819 ntAPPRIS P1 TSL 2 BASIC26.19■■□□□ 1.78
CLPBQ9H078 U2AF2-206ENST00000590551 1104 ntTSL 3 BASIC26.19■■□□□ 1.78
CLPBQ9H078 AP000547.3-202ENST00000592107 1019 ntTSL 1 (best) BASIC26.19■■□□□ 1.78
CLPBQ9H078 NOG-201ENST00000332822 1892 ntAPPRIS P1 BASIC26.19■■□□□ 1.78
CLPBQ9H078 HAUS7-201ENST00000370210 1593 ntAPPRIS ALT2 TSL 2 BASIC26.18■■□□□ 1.78
CLPBQ9H078 AC096888.1-201ENST00000487097 565 ntTSL 4 BASIC26.18■■□□□ 1.78
CLPBQ9H078 FOXA2-202ENST00000419308 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC26.18■■□□□ 1.78
CLPBQ9H078 DCBLD1-201ENST00000296955 1979 ntAPPRIS P2 TSL 1 (best) BASIC26.17■■□□□ 1.78
CLPBQ9H078 SLC52A2-201ENST00000329994 1896 ntAPPRIS P1 TSL 1 (best) BASIC26.17■■□□□ 1.78
CLPBQ9H078 ANKRD13D-211ENST00000511455 2139 ntAPPRIS P1 TSL 1 (best) BASIC26.17■■□□□ 1.78
CLPBQ9H078 PHOX2A-201ENST00000298231 1699 ntAPPRIS P1 TSL 1 (best) BASIC26.16■■□□□ 1.78
CLPBQ9H078 AC108673.1-201ENST00000510422 1159 ntBASIC26.16■■□□□ 1.78
CLPBQ9H078 CIB2-204ENST00000557846 934 ntTSL 3 BASIC26.16■■□□□ 1.78
CLPBQ9H078 AC021231.2-201ENST00000594613 730 ntBASIC26.16■■□□□ 1.78
CLPBQ9H078 CARS2-201ENST00000257347 1879 ntAPPRIS P1 TSL 1 (best) BASIC26.16■■□□□ 1.78
CLPBQ9H078 TM6SF1-202ENST00000322019 2074 ntAPPRIS P1 TSL 1 (best) BASIC26.16■■□□□ 1.78
CLPBQ9H078 AMN-201ENST00000299155 1907 ntAPPRIS P2 TSL 1 (best) BASIC26.16■■□□□ 1.78
CLPBQ9H078 REPIN1-204ENST00000466559 1022 ntTSL 1 (best) BASIC26.15■■□□□ 1.78
CLPBQ9H078 MTMR1-214ENST00000542156 1227 ntTSL 1 (best) BASIC26.15■■□□□ 1.78
CLPBQ9H078 UBE2S-203ENST00000589978 496 ntTSL 5 BASIC26.15■■□□□ 1.78
CLPBQ9H078 CGREF1-203ENST00000402394 1906 ntAPPRIS P2 TSL 2 BASIC26.15■■□□□ 1.78
CLPBQ9H078 BCL3-201ENST00000164227 2038 ntAPPRIS P1 TSL 1 (best) BASIC26.15■■□□□ 1.78
CLPBQ9H078 GAL3ST1-204ENST00000402369 1712 ntAPPRIS P1 TSL 3 BASIC26.14■■□□□ 1.78
CLPBQ9H078 GSC-201ENST00000238558 1264 ntAPPRIS P1 TSL 1 (best) BASIC26.14■■□□□ 1.78
CLPBQ9H078 HS3ST6-201ENST00000454677 1273 ntAPPRIS P1 TSL 1 (best) BASIC26.14■■□□□ 1.78
CLPBQ9H078 CCDC149-203ENST00000502801 1079 ntTSL 1 (best) BASIC26.13■■□□□ 1.77
CLPBQ9H078 SCX-201ENST00000567180 999 ntAPPRIS P1 TSL 1 (best) BASIC26.13■■□□□ 1.77
CLPBQ9H078 MISP3-202ENST00000587086 1535 ntAPPRIS P2 TSL 1 (best) BASIC26.13■■□□□ 1.77
CLPBQ9H078 PAPD7-201ENST00000230859 5459 ntTSL 1 (best) BASIC26.13■■□□□ 1.77
CLPBQ9H078 HNRNPAB-202ENST00000358344 1796 ntAPPRIS P4 TSL 1 (best) BASIC26.12■■□□□ 1.77
CLPBQ9H078 PELI3-203ENST00000524466 1671 ntTSL 1 (best) BASIC26.12■■□□□ 1.77
CLPBQ9H078 CCDC88C-205ENST00000553403 1651 ntTSL 1 (best) BASIC26.12■■□□□ 1.77
CLPBQ9H078 ACTG1-210ENST00000575842 2256 ntAPPRIS P1 TSL 1 (best) BASIC26.12■■□□□ 1.77
CLPBQ9H078 ATPAF1-202ENST00000371937 1827 ntAPPRIS P1 TSL 1 (best) BASIC26.12■■□□□ 1.77
CLPBQ9H078 AC116407.1-201ENST00000398832 1599 ntTSL 2 BASIC26.12■■□□□ 1.77
CLPBQ9H078 PPP3CC-204ENST00000518852 1598 ntTSL 2 BASIC26.12■■□□□ 1.77
CLPBQ9H078 AC010864.1-201ENST00000609407 1511 ntBASIC26.11■■□□□ 1.77
CLPBQ9H078 MBP-237ENST00000579129 1052 ntTSL 5 BASIC26.11■■□□□ 1.77
CLPBQ9H078 RASSF8-202ENST00000381352 2320 ntTSL 1 (best) BASIC26.1■■□□□ 1.77
CLPBQ9H078 DOCK5-202ENST00000410074 786 ntTSL 2 BASIC26.09■■□□□ 1.77
CLPBQ9H078 HLA-V-202ENST00000446817 847 ntBASIC26.09■■□□□ 1.77
CLPBQ9H078 KCTD17-202ENST00000403888 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC26.08■■□□□ 1.77
CLPBQ9H078 ESRRA-201ENST00000000442 2215 ntAPPRIS P3 TSL 1 (best) BASIC26.08■■□□□ 1.77
CLPBQ9H078 MYLIP-202ENST00000356840 1666 ntAPPRIS P1 TSL 1 (best) BASIC26.07■■□□□ 1.76
CLPBQ9H078 HINT2-201ENST00000259667 628 ntAPPRIS P1 TSL 1 (best) BASIC26.07■■□□□ 1.76
CLPBQ9H078 POLR1D-201ENST00000302979 1166 ntAPPRIS P2 TSL 1 (best) BASIC26.07■■□□□ 1.76
CLPBQ9H078 UBE2A-207ENST00000628549 934 ntTSL 2 BASIC26.07■■□□□ 1.76
CLPBQ9H078 PIP4K2B-204ENST00000619039 5734 ntAPPRIS P1 TSL 1 (best) BASIC26.06■■□□□ 1.76
CLPBQ9H078 PLEKHG6-206ENST00000536531 1683 ntTSL 1 (best) BASIC26.06■■□□□ 1.76
CLPBQ9H078 ECI1-207ENST00000570258 1512 ntAPPRIS ALT2 TSL 5 BASIC26.06■■□□□ 1.76
CLPBQ9H078 DNLZ-201ENST00000371738 724 ntAPPRIS P1 TSL 1 (best) BASIC26.06■■□□□ 1.76
CLPBQ9H078 LAPTM4B-203ENST00000521545 915 ntAPPRIS P1 TSL 1 (best) BASIC26.06■■□□□ 1.76
CLPBQ9H078 RP9P-201ENST00000381639 1303 ntTSL 1 (best) BASIC26.06■■□□□ 1.76
CLPBQ9H078 GIPC1-203ENST00000393033 1926 ntAPPRIS P1 TSL 1 (best) BASIC26.06■■□□□ 1.76
Retrieved 100 of 98,524 protein–RNA pairs in 57.8 ms