RNA–Protein interactions for RNA: ENST00000502801.1

CCDC149-203, Transcript of coiled-coil domain containing 149, humanhuman

TSL 1 (best) BASIC

Gene CCDC149, Length 1,079 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC149-203ENST00000502801 NISCHQ9Y2I1 1504 aa64.07■■■■■ 7.85
CCDC149-203ENST00000502801 CCDC180Q9P1Z9 1646 aa57.12■■■■■ 6.73
CCDC149-203ENST00000502801 ABCC9O60706 1549 aa56.31■■■■■ 6.6
CCDC149-203ENST00000502801 RB1CC1Q8TDY2 1594 aa53.95■■■■■ 6.23
CCDC149-203ENST00000502801 NACADO15069 1562 aa53.79■■■■■ 6.2
CCDC149-203ENST00000502801 DCAF8L2P0C7V8 631 aa53.76■■■■■ 6.2
CCDC149-203ENST00000502801 MYO15BQ96JP2 1530 aa53.32■■■■■ 6.13
CCDC149-203ENST00000502801 ZCCHC6Q5VYS8 1495 aaKnown RBP53.26■■■■■ 6.12
CCDC149-203ENST00000502801 DCAF1Q9Y4B6 1507 aa52.95■■■■■ 6.07
CCDC149-203ENST00000502801 UNC13AQ9UPW8 1703 aa52.8■■■■■ 6.04
CCDC149-203ENST00000502801 PABPN1Q86U42 306 aaKnown RBP eCLIP52.58■■■■■ 6.01
CCDC149-203ENST00000502801 BICRAQ9NZM4 1560 aa52.37■■■■■ 5.97
CCDC149-203ENST00000502801 SCRIBQ14160 1630 aa52.12■■■■■ 5.93
CCDC149-203ENST00000502801 DNAJC5BQ9UF47 199 aa52.08■■■■■ 5.93
CCDC149-203ENST00000502801 SHROOM4Q9ULL8 1493 aa51.69■■■■■ 5.87
CCDC149-203ENST00000502801 EIF4G1Q04637 1599 aaKnown RBP51■■■■■ 5.75
CCDC149-203ENST00000502801 CC2D2AQ9P2K1 1620 aa50.91■■■■■ 5.74
CCDC149-203ENST00000502801 CECR2Q9BXF3 1484 aa50.62■■■■■ 5.69
CCDC149-203ENST00000502801 SMARCA4P51532 1647 aa49.8■■■■■ 5.56
CCDC149-203ENST00000502801 BAZ1AQ9NRL2 1556 aaPredicted RBP49.67■■■■■ 5.54
CCDC149-203ENST00000502801 NCAPD3P42695 1498 aa49.65■■■■■ 5.54
CCDC149-203ENST00000502801 ATAD2BQ9ULI0 1458 aa49.63■■■■■ 5.53
CCDC149-203ENST00000502801 SMARCA2P51531 1590 aa49.53■■■■■ 5.52
CCDC149-203ENST00000502801 MROH2BQ7Z745 1585 aa49.39■■■■■ 5.5
CCDC149-203ENST00000502801 HMGXB3Q12766 1538 aa49.35■■■■■ 5.49
CCDC149-203ENST00000502801 PEG3Q9GZU2 1588 aa49.29■■■■■ 5.48
CCDC149-203ENST00000502801 BAZ1BQ9UIG0 1483 aaKnown RBP49.19■■■■■ 5.47
CCDC149-203ENST00000502801 WIZO95785 1651 aa48.86■■■■■ 5.41
CCDC149-203ENST00000502801 RSF1Q96T23 1441 aaPredicted RBP48.66■■■■■ 5.38
CCDC149-203ENST00000502801 NESP48681 1621 aa48.62■■■■■ 5.37
CCDC149-203ENST00000502801 ERCC6Q03468 1493 aa48.55■■■■■ 5.36
CCDC149-203ENST00000502801 LAMC3Q9Y6N6 1575 aa48.4■■■■■ 5.34
CCDC149-203ENST00000502801 TOP2AP11388 1531 aaKnown RBP48.27■■■■■ 5.32
CCDC149-203ENST00000502801 CADPSQ9ULU8 1353 aa48.19■■■■■ 5.31
CCDC149-203ENST00000502801 CUX2O14529 1486 aa48.15■■■■■ 5.3
CCDC149-203ENST00000502801 PDS5BQ9NTI5 1447 aa48.09■■■■■ 5.29
CCDC149-203ENST00000502801 KIF21AQ7Z4S6 1674 aa48.04■■■■■ 5.28
CCDC149-203ENST00000502801 THOC2Q8NI27 1593 aaKnown RBP47.94■■■■■ 5.26
CCDC149-203ENST00000502801 CFTRP13569 1480 aa47.81■■■■■ 5.24
CCDC149-203ENST00000502801 CCDC88BA6NC98 1476 aa47.73■■■■■ 5.23
CCDC149-203ENST00000502801 FANCD2Q9BXW9 1451 aa47.64■■■■■ 5.22
CCDC149-203ENST00000502801 MRC2Q9UBG0 1479 aa47.62■■■■■ 5.21
CCDC149-203ENST00000502801 CEP164Q9UPV0 1460 aa47.61■■■■■ 5.21
CCDC149-203ENST00000502801 WDR62O43379 1518 aa47.47■■■■■ 5.19
CCDC149-203ENST00000502801 PRDM2Q13029 1718 aa47.45■■■■■ 5.19
CCDC149-203ENST00000502801 URB2Q14146 1524 aaKnown RBP47.2■■■■■ 5.15
CCDC149-203ENST00000502801 SUPT5HO00267 1087 aaKnown RBP47.19■■■■■ 5.14
CCDC149-203ENST00000502801 DNAJC5Q9H3Z4 198 aa47.18■■■■■ 5.14
CCDC149-203ENST00000502801 TOPBP1Q92547 1522 aa46.84■■■■■ 5.09
CCDC149-203ENST00000502801 ABCC8Q09428 1581 aa46.78■■■■■ 5.08
CCDC149-203ENST00000502801 DNMBPQ6XZF7 1577 aa46.74■■■■■ 5.07
CCDC149-203ENST00000502801 IFT140Q96RY7 1462 aa46.62■■■■■ 5.05
CCDC149-203ENST00000502801 ZNF608Q9ULD9 1512 aaPredicted RBP46.49■■■■■ 5.03
CCDC149-203ENST00000502801 POLA1P09884 1462 aaPredicted RBP46.41■■■■■ 5.02
CCDC149-203ENST00000502801 TARBP1Q13395 1621 aaKnown RBP46.36■■■■■ 5.01
CCDC149-203ENST00000502801 CUX1P39880 1505 aa46.34■■■■■ 5.01
CCDC149-203ENST00000502801 EIF4G3O43432 1585 aaKnown RBP46.26■■■■■ 5
CCDC149-203ENST00000502801 FGD5Q6ZNL6 1462 aa46.25■■■■■ 5
CCDC149-203ENST00000502801 RAD54L2Q9Y4B4 1467 aa46.25■■■■■ 4.99
CCDC149-203ENST00000502801 SOGA1O94964 1423 aa46.23■■■■■ 4.99
CCDC149-203ENST00000502801 AQRO60306 1485 aaKnown RBP eCLIP46.18■■■■■ 4.98
CCDC149-203ENST00000502801 OSCARQ8IYS5 282 aa46.13■■■■■ 4.98
CCDC149-203ENST00000502801 TDRD9Q8NDG6 1382 aaKnown RBP46.03■■■■■ 4.96
CCDC149-203ENST00000502801 WDR97A6NE52 1622 aa45.92■■■■■ 4.94
CCDC149-203ENST00000502801 WRNQ14191 1432 aaPredicted RBP eCLIP45.89■■■■■ 4.94
CCDC149-203ENST00000502801 TOP2BQ02880 1626 aa45.84■■■■■ 4.93
CCDC149-203ENST00000502801 BIVM-ERCC5R4GMW8 1640 aa45.84■■■■■ 4.93
CCDC149-203ENST00000502801 SYNJ1O43426 1573 aa45.82■■■■■ 4.93
CCDC149-203ENST00000502801 CHD1O14646 1710 aa45.79■■■■■ 4.92
CCDC149-203ENST00000502801 ABCA10Q8WWZ4 1543 aa45.77■■■■■ 4.92
CCDC149-203ENST00000502801 FBLN2P98095 1184 aa45.72■■■■■ 4.91
CCDC149-203ENST00000502801 GRIN2BQ13224 1484 aa45.72■■■■■ 4.91
CCDC149-203ENST00000502801 SNAPC4Q5SXM2 1469 aa45.72■■■■■ 4.91
CCDC149-203ENST00000502801 GAPVD1Q14C86 1478 aa45.68■■■■■ 4.9
CCDC149-203ENST00000502801 PBRM1Q86U86 1689 aa45.63■■■■■ 4.89
CCDC149-203ENST00000502801 ABCA5Q8WWZ7 1642 aa45.63■■■■■ 4.89
CCDC149-203ENST00000502801 MAGI1Q96QZ7 1491 aaPredicted RBP45.62■■■■■ 4.89
CCDC149-203ENST00000502801 CHMP7Q8WUX9 453 aaPredicted RBP45.51■■■■■ 4.88
CCDC149-203ENST00000502801 TRIM41Q8WV44 630 aa45.49■■■■■ 4.87
CCDC149-203ENST00000502801 SYNJ2O15056 1496 aa45.46■■■■■ 4.87
CCDC149-203ENST00000502801 RIMBP3CA6NJZ7 1639 aa45.43■■■■■ 4.86
CCDC149-203ENST00000502801 RIMBP3BA6NNM3 1639 aa45.43■■■■■ 4.86
CCDC149-203ENST00000502801 RIMBP3Q9UFD9 1639 aa45.43■■■■■ 4.86
CCDC149-203ENST00000502801 ARHGEF11O15085 1522 aa45.36■■■■■ 4.85
CCDC149-203ENST00000502801 CLASP1Q7Z460 1538 aa45.25■■■■■ 4.83
CCDC149-203ENST00000502801 ADAMTS12P58397 1594 aa45.22■■■■■ 4.83
CCDC149-203ENST00000502801 ERICH3Q5RHP9 1530 aa45.21■■■■■ 4.83
CCDC149-203ENST00000502801 GRIN2AQ12879 1464 aa45.13■■■■■ 4.82
CCDC149-203ENST00000502801 FHAD1B1AJZ9 1412 aa45.12■■■■■ 4.81
CCDC149-203ENST00000502801 CYB5RLQ6IPT4 315 aa45.01■■■■■ 4.8
CCDC149-203ENST00000502801 ARAP1Q96P48 1450 aa44.98■■■■■ 4.79
CCDC149-203ENST00000502801 KIF27Q86VH2 1401 aa44.96■■■■■ 4.79
CCDC149-203ENST00000502801 CEP170Q5SW79 1584 aa44.94■■■■■ 4.79
CCDC149-203ENST00000502801 NUP160Q12769 1436 aa44.93■■■■■ 4.78
CCDC149-203ENST00000502801 IGF1RP08069 1367 aa44.85■■■■■ 4.77
CCDC149-203ENST00000502801 CUL7Q14999 1698 aa44.73■■■■■ 4.75
CCDC149-203ENST00000502801 SHROOM2Q13796 1616 aa44.65■■■■■ 4.74
CCDC149-203ENST00000502801 ERCC6L2Q5T890 1561 aa44.64■■■■■ 4.74
CCDC149-203ENST00000502801 CARMIL1Q5VZK9 1371 aa44.57■■■■■ 4.73
CCDC149-203ENST00000502801 RUSC2Q8N2Y8 1516 aa44.55■■■■■ 4.72
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms