RNA–Protein interactions for RNA: ENST00000405025.5

HDAC11-206, Transcript of histone deacetylase 11, humanhuman

TSL 4 BASIC

Gene HDAC11, Length 576 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC11-206ENST00000405025 NISCHQ9Y2I1 1504 aa64.74■■■■■ 7.95
HDAC11-206ENST00000405025 CCDC180Q9P1Z9 1646 aa57.72■■■■■ 6.83
HDAC11-206ENST00000405025 ABCC9O60706 1549 aa56.91■■■■■ 6.7
HDAC11-206ENST00000405025 RB1CC1Q8TDY2 1594 aa54.49■■■■■ 6.31
HDAC11-206ENST00000405025 NACADO15069 1562 aa54.32■■■■■ 6.29
HDAC11-206ENST00000405025 DCAF8L2P0C7V8 631 aa54.21■■■■■ 6.27
HDAC11-206ENST00000405025 ZCCHC6Q5VYS8 1495 aaKnown RBP53.86■■■■■ 6.21
HDAC11-206ENST00000405025 MYO15BQ96JP2 1530 aa53.83■■■■■ 6.21
HDAC11-206ENST00000405025 DCAF1Q9Y4B6 1507 aa53.48■■■■■ 6.15
HDAC11-206ENST00000405025 UNC13AQ9UPW8 1703 aa53.38■■■■■ 6.14
HDAC11-206ENST00000405025 PABPN1Q86U42 306 aaKnown RBP eCLIP53.1■■■■■ 6.09
HDAC11-206ENST00000405025 BICRAQ9NZM4 1560 aa52.96■■■■■ 6.07
HDAC11-206ENST00000405025 SCRIBQ14160 1630 aa52.71■■■■■ 6.03
HDAC11-206ENST00000405025 DNAJC5BQ9UF47 199 aa52.62■■■■■ 6.01
HDAC11-206ENST00000405025 SHROOM4Q9ULL8 1493 aa52.2■■■■■ 5.95
HDAC11-206ENST00000405025 EIF4G1Q04637 1599 aaKnown RBP51.54■■■■■ 5.84
HDAC11-206ENST00000405025 CC2D2AQ9P2K1 1620 aa51.46■■■■■ 5.83
HDAC11-206ENST00000405025 CECR2Q9BXF3 1484 aa51.14■■■■■ 5.78
HDAC11-206ENST00000405025 SMARCA4P51532 1647 aa50.34■■■■■ 5.65
HDAC11-206ENST00000405025 BAZ1AQ9NRL2 1556 aaPredicted RBP50.17■■■■■ 5.62
HDAC11-206ENST00000405025 ATAD2BQ9ULI0 1458 aa50.14■■■■■ 5.62
HDAC11-206ENST00000405025 NCAPD3P42695 1498 aa50.14■■■■■ 5.62
HDAC11-206ENST00000405025 SMARCA2P51531 1590 aa50.02■■■■■ 5.6
HDAC11-206ENST00000405025 MROH2BQ7Z745 1585 aa49.94■■■■■ 5.59
HDAC11-206ENST00000405025 HMGXB3Q12766 1538 aa49.87■■■■■ 5.57
HDAC11-206ENST00000405025 PEG3Q9GZU2 1588 aa49.82■■■■■ 5.57
HDAC11-206ENST00000405025 BAZ1BQ9UIG0 1483 aaKnown RBP49.69■■■■■ 5.55
HDAC11-206ENST00000405025 WIZO95785 1651 aa49.39■■■■■ 5.5
HDAC11-206ENST00000405025 RSF1Q96T23 1441 aaPredicted RBP49.18■■■■■ 5.46
HDAC11-206ENST00000405025 NESP48681 1621 aa49.16■■■■■ 5.46
HDAC11-206ENST00000405025 ERCC6Q03468 1493 aa49.01■■■■■ 5.44
HDAC11-206ENST00000405025 LAMC3Q9Y6N6 1575 aa48.88■■■■■ 5.42
HDAC11-206ENST00000405025 TOP2AP11388 1531 aaKnown RBP48.8■■■■■ 5.4
HDAC11-206ENST00000405025 CADPSQ9ULU8 1353 aa48.64■■■■■ 5.38
HDAC11-206ENST00000405025 CUX2O14529 1486 aa48.61■■■■■ 5.37
HDAC11-206ENST00000405025 KIF21AQ7Z4S6 1674 aa48.57■■■■■ 5.37
HDAC11-206ENST00000405025 PDS5BQ9NTI5 1447 aa48.52■■■■■ 5.36
HDAC11-206ENST00000405025 THOC2Q8NI27 1593 aaKnown RBP48.49■■■■■ 5.35
HDAC11-206ENST00000405025 CFTRP13569 1480 aa48.3■■■■■ 5.32
HDAC11-206ENST00000405025 CCDC88BA6NC98 1476 aa48.23■■■■■ 5.31
HDAC11-206ENST00000405025 FANCD2Q9BXW9 1451 aa48.13■■■■■ 5.3
HDAC11-206ENST00000405025 MRC2Q9UBG0 1479 aa48.11■■■■■ 5.29
HDAC11-206ENST00000405025 CEP164Q9UPV0 1460 aa48.1■■■■■ 5.29
HDAC11-206ENST00000405025 WDR62O43379 1518 aa47.99■■■■■ 5.27
HDAC11-206ENST00000405025 PRDM2Q13029 1718 aa47.95■■■■■ 5.27
HDAC11-206ENST00000405025 URB2Q14146 1524 aaKnown RBP47.72■■■■■ 5.23
HDAC11-206ENST00000405025 SUPT5HO00267 1087 aaKnown RBP47.63■■■■■ 5.22
HDAC11-206ENST00000405025 DNAJC5Q9H3Z4 198 aa47.59■■■■■ 5.21
HDAC11-206ENST00000405025 TOPBP1Q92547 1522 aa47.34■■■■■ 5.17
HDAC11-206ENST00000405025 DNMBPQ6XZF7 1577 aa47.24■■■■■ 5.15
HDAC11-206ENST00000405025 ABCC8Q09428 1581 aa47.2■■■■■ 5.15
HDAC11-206ENST00000405025 IFT140Q96RY7 1462 aa47.08■■■■■ 5.13
HDAC11-206ENST00000405025 ZNF608Q9ULD9 1512 aaPredicted RBP47■■■■■ 5.12
HDAC11-206ENST00000405025 POLA1P09884 1462 aaPredicted RBP46.91■■■■■ 5.1
HDAC11-206ENST00000405025 TARBP1Q13395 1621 aaKnown RBP46.87■■■■■ 5.09
HDAC11-206ENST00000405025 CUX1P39880 1505 aa46.87■■■■■ 5.09
HDAC11-206ENST00000405025 EIF4G3O43432 1585 aaKnown RBP46.79■■■■■ 5.08
HDAC11-206ENST00000405025 FGD5Q6ZNL6 1462 aa46.75■■■■■ 5.07
HDAC11-206ENST00000405025 RAD54L2Q9Y4B4 1467 aa46.75■■■■■ 5.07
HDAC11-206ENST00000405025 SOGA1O94964 1423 aa46.66■■■■■ 5.06
HDAC11-206ENST00000405025 AQRO60306 1485 aaKnown RBP eCLIP46.65■■■■■ 5.061e-6■■■■■ 29
HDAC11-206ENST00000405025 OSCARQ8IYS5 282 aa46.5■■■■■ 5.03
HDAC11-206ENST00000405025 TDRD9Q8NDG6 1382 aaKnown RBP46.49■■■■■ 5.03
HDAC11-206ENST00000405025 WDR97A6NE52 1622 aa46.42■■■■■ 5.02
HDAC11-206ENST00000405025 WRNQ14191 1432 aaPredicted RBP eCLIP46.36■■■■■ 5.015e-6■■■■■ 29.2
HDAC11-206ENST00000405025 SYNJ1O43426 1573 aa46.35■■■■■ 5.01
HDAC11-206ENST00000405025 BIVM-ERCC5R4GMW8 1640 aa46.34■■■■■ 5.01
HDAC11-206ENST00000405025 TOP2BQ02880 1626 aa46.32■■■■■ 5
HDAC11-206ENST00000405025 CHD1O14646 1710 aa46.29■■■■■ 5
HDAC11-206ENST00000405025 ABCA10Q8WWZ4 1543 aa46.24■■■■■ 4.99
HDAC11-206ENST00000405025 SNAPC4Q5SXM2 1469 aa46.22■■■■■ 4.99
HDAC11-206ENST00000405025 GRIN2BQ13224 1484 aa46.17■■■■■ 4.98
HDAC11-206ENST00000405025 ABCA5Q8WWZ7 1642 aa46.14■■■■■ 4.98
HDAC11-206ENST00000405025 GAPVD1Q14C86 1478 aa46.13■■■■■ 4.98
HDAC11-206ENST00000405025 PBRM1Q86U86 1689 aa46.13■■■■■ 4.97
HDAC11-206ENST00000405025 FBLN2P98095 1184 aa46.11■■■■■ 4.97
HDAC11-206ENST00000405025 MAGI1Q96QZ7 1491 aaPredicted RBP46.08■■■■■ 4.97
HDAC11-206ENST00000405025 RIMBP3CA6NJZ7 1639 aa45.92■■■■■ 4.94
HDAC11-206ENST00000405025 RIMBP3BA6NNM3 1639 aa45.92■■■■■ 4.94
HDAC11-206ENST00000405025 RIMBP3Q9UFD9 1639 aa45.92■■■■■ 4.94
HDAC11-206ENST00000405025 SYNJ2O15056 1496 aa45.92■■■■■ 4.94
HDAC11-206ENST00000405025 TRIM41Q8WV44 630 aa45.9■■■■■ 4.94
HDAC11-206ENST00000405025 CHMP7Q8WUX9 453 aaPredicted RBP45.89■■■■■ 4.94
HDAC11-206ENST00000405025 ARHGEF11O15085 1522 aa45.84■■■■■ 4.93
HDAC11-206ENST00000405025 CLASP1Q7Z460 1538 aa45.76■■■■■ 4.92
HDAC11-206ENST00000405025 ADAMTS12P58397 1594 aa45.74■■■■■ 4.91
HDAC11-206ENST00000405025 ERICH3Q5RHP9 1530 aa45.66■■■■■ 4.9
HDAC11-206ENST00000405025 GRIN2AQ12879 1464 aa45.6■■■■■ 4.89
HDAC11-206ENST00000405025 FHAD1B1AJZ9 1412 aa45.57■■■■■ 4.89
HDAC11-206ENST00000405025 ARAP1Q96P48 1450 aa45.48■■■■■ 4.87
HDAC11-206ENST00000405025 CEP170Q5SW79 1584 aa45.45■■■■■ 4.87
HDAC11-206ENST00000405025 NUP160Q12769 1436 aa45.42■■■■■ 4.86
HDAC11-206ENST00000405025 CYB5RLQ6IPT4 315 aa45.4■■■■■ 4.86
HDAC11-206ENST00000405025 KIF27Q86VH2 1401 aa45.38■■■■■ 4.86
HDAC11-206ENST00000405025 IGF1RP08069 1367 aa45.29■■■■■ 4.84
HDAC11-206ENST00000405025 CUL7Q14999 1698 aa45.18■■■■■ 4.82
HDAC11-206ENST00000405025 ERCC6L2Q5T890 1561 aa45.16■■■■■ 4.82
HDAC11-206ENST00000405025 SHROOM2Q13796 1616 aa45.15■■■■■ 4.82
HDAC11-206ENST00000405025 RUSC2Q8N2Y8 1516 aa45.07■■■■■ 4.81
HDAC11-206ENST00000405025 CARMIL1Q5VZK9 1371 aa44.99■■■■■ 4.79
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms