Protein–RNA interactions for Protein: Q9Y5F9

PCDHGB6, Protocadherin gamma-B6, humanhuman

Predictions only

Length 930 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB6Q9Y5F9 AC087741.3-201ENST00000624270 1347 ntBASIC24.96■■□□□ 1.59
PCDHGB6Q9Y5F9 BCL7B-201ENST00000223368 1975 ntAPPRIS P1 TSL 1 (best) BASIC24.95■■□□□ 1.58
PCDHGB6Q9Y5F9 FAM89B-201ENST00000316409 1409 ntTSL 1 (best) BASIC24.95■■□□□ 1.58
PCDHGB6Q9Y5F9 COX4I1-203ENST00000562336 873 ntAPPRIS P1 TSL 5 BASIC24.94■■□□□ 1.58
PCDHGB6Q9Y5F9 CACNG6-201ENST00000252729 1853 ntAPPRIS P1 TSL 1 (best) BASIC24.94■■□□□ 1.58
PCDHGB6Q9Y5F9 MSRB2-201ENST00000376510 1803 ntAPPRIS P1 TSL 1 (best) BASIC24.93■■□□□ 1.58
PCDHGB6Q9Y5F9 AC012629.2-201ENST00000606513 377 ntTSL 5 BASIC24.93■■□□□ 1.58
PCDHGB6Q9Y5F9 AC120057.4-201ENST00000624722 1615 ntBASIC24.93■■□□□ 1.58
PCDHGB6Q9Y5F9 FOXA2-202ENST00000419308 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC24.93■■□□□ 1.58
PCDHGB6Q9Y5F9 CPNE1-203ENST00000397442 1695 ntTSL 5 BASIC24.92■■□□□ 1.58
PCDHGB6Q9Y5F9 SSU72-201ENST00000291386 1290 ntAPPRIS P1 TSL 1 (best) BASIC24.92■■□□□ 1.58
PCDHGB6Q9Y5F9 CTDNEP1-201ENST00000318988 1549 ntAPPRIS P1 TSL 1 (best) BASIC24.91■■□□□ 1.58
PCDHGB6Q9Y5F9 RRAGC-201ENST00000373001 2732 ntAPPRIS P1 TSL 1 (best) BASIC24.91■■□□□ 1.58
PCDHGB6Q9Y5F9 GFRA4-202ENST00000319242 900 ntAPPRIS P4 TSL 1 (best) BASIC24.91■■□□□ 1.58
PCDHGB6Q9Y5F9 NPHP3-202ENST00000383282 782 ntTSL 1 (best) BASIC24.91■■□□□ 1.58
PCDHGB6Q9Y5F9 ARL8A-204ENST00000614750 1727 ntTSL 3 BASIC24.91■■□□□ 1.58
PCDHGB6Q9Y5F9 AC105285.1-201ENST00000500914 2036 ntTSL 1 (best) BASIC24.9■■□□□ 1.58
PCDHGB6Q9Y5F9 AC044849.2-201ENST00000606596 710 ntBASIC24.9■■□□□ 1.58
PCDHGB6Q9Y5F9 MISP3-201ENST00000269720 1424 ntAPPRIS ALT2 TSL 5 BASIC24.89■■□□□ 1.58
PCDHGB6Q9Y5F9 ZFAND2B-206ENST00000409336 944 ntAPPRIS P1 TSL 5 BASIC24.89■■□□□ 1.58
PCDHGB6Q9Y5F9 ZFAND2B-221ENST00000621130 1070 ntTSL 5 BASIC24.89■■□□□ 1.58
PCDHGB6Q9Y5F9 HOXB3-207ENST00000472863 1909 ntTSL 2 BASIC24.88■■□□□ 1.57
PCDHGB6Q9Y5F9 TPI1-201ENST00000229270 1763 ntTSL 1 (best) BASIC24.88■■□□□ 1.57
PCDHGB6Q9Y5F9 NKIRAS2-202ENST00000316082 833 ntTSL 5 BASIC24.88■■□□□ 1.57
PCDHGB6Q9Y5F9 AGAP1-202ENST00000336665 5427 ntAPPRIS P3 TSL 1 (best) BASIC24.87■■□□□ 1.57
PCDHGB6Q9Y5F9 AP000911.1-206ENST00000531938 711 ntTSL 3 BASIC24.87■■□□□ 1.57
PCDHGB6Q9Y5F9 NEUROG2-201ENST00000313341 2287 ntAPPRIS P1 TSL 1 (best) BASIC24.87■■□□□ 1.57
PCDHGB6Q9Y5F9 TMEM229A-201ENST00000455783 2108 ntAPPRIS P1 BASIC24.86■■□□□ 1.57
PCDHGB6Q9Y5F9 CHMP4B-201ENST00000217402 1646 ntAPPRIS P1 TSL 1 (best) BASIC24.86■■□□□ 1.57
PCDHGB6Q9Y5F9 RCC1L-205ENST00000618035 1409 ntTSL 1 (best) BASIC24.86■■□□□ 1.57
PCDHGB6Q9Y5F9 MBOAT7-202ENST00000338624 2076 ntTSL 2 BASIC24.85■■□□□ 1.57
PCDHGB6Q9Y5F9 GATA6-202ENST00000581694 2057 ntAPPRIS P1 TSL 1 (best) BASIC24.85■■□□□ 1.57
PCDHGB6Q9Y5F9 ABL1-201ENST00000318560 5766 ntTSL 1 (best) BASIC24.84■■□□□ 1.57
PCDHGB6Q9Y5F9 SLC2A4RG-201ENST00000266077 1731 ntAPPRIS P1 TSL 1 (best) BASIC24.84■■□□□ 1.57
PCDHGB6Q9Y5F9 CAPNS1-201ENST00000246533 1918 ntAPPRIS P2 TSL 1 (best) BASIC24.83■■□□□ 1.57
PCDHGB6Q9Y5F9 COPRS-202ENST00000378634 1041 ntTSL 2 BASIC24.83■■□□□ 1.57
PCDHGB6Q9Y5F9 GSTP1-202ENST00000398606 965 ntAPPRIS P1 TSL 1 (best) BASIC24.83■■□□□ 1.57
PCDHGB6Q9Y5F9 MLEC-202ENST00000412616 841 ntTSL 3 BASIC24.81■■□□□ 1.56
PCDHGB6Q9Y5F9 SMARCD3-201ENST00000262188 1993 ntAPPRIS P1 TSL 1 (best) BASIC24.81■■□□□ 1.56
PCDHGB6Q9Y5F9 LANCL3-203ENST00000614025 1469 ntTSL 2 BASIC24.79■■□□□ 1.56
PCDHGB6Q9Y5F9 NAA50-207ENST00000493900 962 ntAPPRIS ALT1 TSL 2 BASIC24.79■■□□□ 1.56
PCDHGB6Q9Y5F9 RNF130-205ENST00000521389 2263 ntAPPRIS P1 TSL 1 (best) BASIC24.78■■□□□ 1.56
PCDHGB6Q9Y5F9 ABCB10P1-201ENST00000614297 2181 ntBASIC24.78■■□□□ 1.56
PCDHGB6Q9Y5F9 CGREF1-202ENST00000312734 1610 ntAPPRIS P2 TSL 5 BASIC24.78■■□□□ 1.56
PCDHGB6Q9Y5F9 LZTS2-201ENST00000370220 5741 ntAPPRIS P1 TSL 1 (best) BASIC24.77■■□□□ 1.56
PCDHGB6Q9Y5F9 FTCD-203ENST00000397746 1878 ntAPPRIS P1 TSL 1 (best) BASIC24.77■■□□□ 1.56
PCDHGB6Q9Y5F9 RNF150-204ENST00000507500 1530 ntTSL 1 (best) BASIC24.76■■□□□ 1.55
PCDHGB6Q9Y5F9 RNF130-201ENST00000261947 1766 ntTSL 1 (best) BASIC24.76■■□□□ 1.55
PCDHGB6Q9Y5F9 HSPB11-201ENST00000194214 915 ntAPPRIS P1 TSL 1 (best) BASIC24.75■■□□□ 1.55
PCDHGB6Q9Y5F9 CRIP1-201ENST00000330233 1311 ntAPPRIS P1 TSL 1 (best) BASIC24.75■■□□□ 1.55
PCDHGB6Q9Y5F9 EXOC3L4-201ENST00000380069 2293 ntAPPRIS P1 TSL 1 (best) BASIC24.75■■□□□ 1.55
PCDHGB6Q9Y5F9 ACTR3B-202ENST00000377776 1566 ntTSL 1 (best) BASIC24.75■■□□□ 1.55
PCDHGB6Q9Y5F9 ZIC2-201ENST00000376335 2983 ntAPPRIS P1 TSL 1 (best) BASIC24.75■■□□□ 1.55
PCDHGB6Q9Y5F9 HDAC3-201ENST00000305264 1959 ntAPPRIS P1 TSL 1 (best) BASIC24.74■■□□□ 1.55
PCDHGB6Q9Y5F9 ABCB10P3-201ENST00000561950 2166 ntBASIC24.74■■□□□ 1.55
PCDHGB6Q9Y5F9 CDKN2A-201ENST00000304494 1218 ntTSL 1 (best) BASIC24.74■■□□□ 1.55
PCDHGB6Q9Y5F9 ABHD17AP4-201ENST00000411545 909 ntBASIC24.74■■□□□ 1.55
PCDHGB6Q9Y5F9 SMIM12-205ENST00000456842 918 ntAPPRIS P1 TSL 2 BASIC24.73■■□□□ 1.55
PCDHGB6Q9Y5F9 PURG-201ENST00000339382 2693 ntTSL 1 (best) BASIC24.73■■□□□ 1.55
PCDHGB6Q9Y5F9 CADPS-215ENST00000490353 2669 ntTSL 5 BASIC24.73■■□□□ 1.55
PCDHGB6Q9Y5F9 PQLC1-202ENST00000357575 2475 ntAPPRIS ALT1 TSL 5 BASIC24.73■■□□□ 1.55
PCDHGB6Q9Y5F9 CCZ1B-215ENST00000626257 2211 ntTSL 2 BASIC24.73■■□□□ 1.55
PCDHGB6Q9Y5F9 SHF-206ENST00000560471 2499 ntTSL 5 BASIC24.72■■□□□ 1.55
PCDHGB6Q9Y5F9 CUEDC1-201ENST00000360238 2193 ntAPPRIS P1 TSL 2 BASIC24.71■■□□□ 1.55
PCDHGB6Q9Y5F9 FTCD-204ENST00000397748 1955 ntTSL 1 (best) BASIC24.71■■□□□ 1.55
PCDHGB6Q9Y5F9 TESK1-206ENST00000620767 2438 ntAPPRIS P1 TSL 5 BASIC24.71■■□□□ 1.55
PCDHGB6Q9Y5F9 TSEN34-203ENST00000396388 1349 ntAPPRIS P1 TSL 1 (best) BASIC24.71■■□□□ 1.55
PCDHGB6Q9Y5F9 ATRAID-201ENST00000380171 1240 ntTSL 1 (best) BASIC24.71■■□□□ 1.55
PCDHGB6Q9Y5F9 NMB-202ENST00000394588 1017 ntTSL 1 (best) BASIC24.71■■□□□ 1.55
PCDHGB6Q9Y5F9 AC104109.3-201ENST00000519718 483 ntAPPRIS P1 TSL 5 BASIC24.71■■□□□ 1.55
PCDHGB6Q9Y5F9 RPS2-209ENST00000529806 993 ntTSL 3 BASIC24.71■■□□□ 1.55
PCDHGB6Q9Y5F9 VEGFA-231ENST00000640499 1188 ntAPPRIS P3 TSL 1 (best) BASIC24.71■■□□□ 1.55
PCDHGB6Q9Y5F9 HSD11B1L-209ENST00000577917 1553 ntTSL 1 (best) BASIC24.71■■□□□ 1.55
PCDHGB6Q9Y5F9 MPST-206ENST00000429360 1331 ntTSL 1 (best) BASIC24.69■■□□□ 1.54
PCDHGB6Q9Y5F9 BOD1-201ENST00000285908 1286 ntTSL 1 (best) BASIC24.69■■□□□ 1.54
PCDHGB6Q9Y5F9 BOD1-206ENST00000480951 814 ntTSL 2 BASIC24.69■■□□□ 1.54
PCDHGB6Q9Y5F9 ANKRD13D-211ENST00000511455 2139 ntAPPRIS P1 TSL 1 (best) BASIC24.69■■□□□ 1.54
PCDHGB6Q9Y5F9 FAM117A-201ENST00000240364 2365 ntAPPRIS P2 TSL 1 (best) BASIC24.69■■□□□ 1.54
PCDHGB6Q9Y5F9 BIN1-204ENST00000348750 2074 ntTSL 1 (best) BASIC24.69■■□□□ 1.54
PCDHGB6Q9Y5F9 NXNL1-201ENST00000301944 946 ntAPPRIS P1 TSL 1 (best) BASIC24.68■■□□□ 1.54
PCDHGB6Q9Y5F9 AC139426.1-201ENST00000568218 2529 ntBASIC24.68■■□□□ 1.54
PCDHGB6Q9Y5F9 ARPC5L-202ENST00000353214 2507 ntAPPRIS P1 TSL 2 BASIC24.67■■□□□ 1.54
PCDHGB6Q9Y5F9 SRSF9-201ENST00000229390 1201 ntAPPRIS P1 TSL 1 (best) BASIC24.67■■□□□ 1.54
PCDHGB6Q9Y5F9 PPP1R14B-201ENST00000309318 982 ntAPPRIS P1 TSL 1 (best) BASIC24.67■■□□□ 1.54
PCDHGB6Q9Y5F9 UBALD1-202ENST00000587615 799 ntTSL 2 BASIC24.67■■□□□ 1.54
PCDHGB6Q9Y5F9 TCEA2-202ENST00000343484 1235 ntAPPRIS P1 TSL 1 (best) BASIC24.66■■□□□ 1.54
PCDHGB6Q9Y5F9 RTN2-201ENST00000245923 2293 ntTSL 1 (best) BASIC24.66■■□□□ 1.54
PCDHGB6Q9Y5F9 NGB-201ENST00000298352 1884 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
PCDHGB6Q9Y5F9 AGAP3-216ENST00000479901 1881 ntTSL 5 BASIC24.64■■□□□ 1.54
PCDHGB6Q9Y5F9 TRAM2-AS1-201ENST00000453216 664 ntTSL 3 BASIC24.63■■□□□ 1.53
PCDHGB6Q9Y5F9 DUSP14-206ENST00000617516 1537 ntAPPRIS P1 TSL 1 (best) BASIC24.62■■□□□ 1.53
PCDHGB6Q9Y5F9 ABHD17A-201ENST00000250974 1630 ntTSL 1 (best) BASIC24.62■■□□□ 1.53
PCDHGB6Q9Y5F9 MIR7108-201ENST00000614319 87 ntBASIC24.62■■□□□ 1.53
PCDHGB6Q9Y5F9 FSD1L-204ENST00000469022 1836 ntTSL 1 (best) BASIC24.61■■□□□ 1.53
PCDHGB6Q9Y5F9 PANK2-207ENST00000610179 1807 ntAPPRIS ALT2 TSL 1 (best) BASIC24.61■■□□□ 1.53
PCDHGB6Q9Y5F9 PSMG4-202ENST00000380305 489 ntTSL 5 BASIC24.61■■□□□ 1.53
PCDHGB6Q9Y5F9 FGFRL1-205ENST00000510644 2304 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
PCDHGB6Q9Y5F9 ELK4-201ENST00000289703 2118 ntTSL 1 (best) BASIC24.61■■□□□ 1.53
PCDHGB6Q9Y5F9 TRNP1-201ENST00000522111 1958 ntAPPRIS P2 TSL 1 (best) BASIC24.6■■□□□ 1.53
PCDHGB6Q9Y5F9 FZD2-201ENST00000315323 2112 ntAPPRIS P1 BASIC24.6■■□□□ 1.53
Retrieved 100 of 98,524 protein–RNA pairs in 16.8 ms