RNA–Protein interactions for RNA: ENST00000562336.5

COX4I1-203, Transcript of cytochrome c oxidase subunit 4I1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene COX4I1, Length 873 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COX4I1-203ENST00000562336 NISCHQ9Y2I1 1504 aa66.2■■■■■ 8.19
COX4I1-203ENST00000562336 CCDC180Q9P1Z9 1646 aa59.15■■■■■ 7.06
COX4I1-203ENST00000562336 ABCC9O60706 1549 aa58.93■■■■■ 7.02
COX4I1-203ENST00000562336 RB1CC1Q8TDY2 1594 aa56.16■■■■■ 6.58
COX4I1-203ENST00000562336 NACADO15069 1562 aa55.87■■■■■ 6.53
COX4I1-203ENST00000562336 DCAF8L2P0C7V8 631 aa55.82■■■■■ 6.53
COX4I1-203ENST00000562336 MYO15BQ96JP2 1530 aa55.19■■■■■ 6.43
COX4I1-203ENST00000562336 DNAJC5BQ9UF47 199 aa55.03■■■■■ 6.4
COX4I1-203ENST00000562336 PABPN1Q86U42 306 aaKnown RBP eCLIP54.99■■■■■ 6.39
COX4I1-203ENST00000562336 ZCCHC6Q5VYS8 1495 aaKnown RBP54.94■■■■■ 6.39
COX4I1-203ENST00000562336 UNC13AQ9UPW8 1703 aa54.91■■■■■ 6.38
COX4I1-203ENST00000562336 DCAF1Q9Y4B6 1507 aa54.65■■■■■ 6.34
COX4I1-203ENST00000562336 BICRAQ9NZM4 1560 aa54.59■■■■■ 6.33
COX4I1-203ENST00000562336 SCRIBQ14160 1630 aa54.03■■■■■ 6.24
COX4I1-203ENST00000562336 SHROOM4Q9ULL8 1493 aa53.75■■■■■ 6.19
COX4I1-203ENST00000562336 CC2D2AQ9P2K1 1620 aa53.2■■■■■ 6.11
COX4I1-203ENST00000562336 EIF4G1Q04637 1599 aaKnown RBP53.18■■■■■ 6.1
COX4I1-203ENST00000562336 CECR2Q9BXF3 1484 aa53.01■■■■■ 6.08
COX4I1-203ENST00000562336 NCAPD3P42695 1498 aa51.61■■■■■ 5.85
COX4I1-203ENST00000562336 SMARCA4P51532 1647 aa51.55■■■■■ 5.84
COX4I1-203ENST00000562336 ATAD2BQ9ULI0 1458 aa51.54■■■■■ 5.84
COX4I1-203ENST00000562336 SMARCA2P51531 1590 aa51.35■■■■■ 5.81
COX4I1-203ENST00000562336 BAZ1AQ9NRL2 1556 aaPredicted RBP51.32■■■■■ 5.81
COX4I1-203ENST00000562336 HMGXB3Q12766 1538 aa51.23■■■■■ 5.79
COX4I1-203ENST00000562336 MROH2BQ7Z745 1585 aa51.06■■■■■ 5.77
COX4I1-203ENST00000562336 BAZ1BQ9UIG0 1483 aaKnown RBP51.03■■■■■ 5.76
COX4I1-203ENST00000562336 PEG3Q9GZU2 1588 aa51.01■■■■■ 5.76
COX4I1-203ENST00000562336 ERCC6Q03468 1493 aa50.8■■■■■ 5.72
COX4I1-203ENST00000562336 NESP48681 1621 aa50.76■■■■■ 5.72
COX4I1-203ENST00000562336 CUX2O14529 1486 aa50.54■■■■■ 5.68
COX4I1-203ENST00000562336 WIZO95785 1651 aa50.45■■■■■ 5.67
COX4I1-203ENST00000562336 LAMC3Q9Y6N6 1575 aa50.34■■■■■ 5.65
COX4I1-203ENST00000562336 DNAJC5Q9H3Z4 198 aa50.17■■■■■ 5.62
COX4I1-203ENST00000562336 RSF1Q96T23 1441 aaPredicted RBP50.14■■■■■ 5.62
COX4I1-203ENST00000562336 THOC2Q8NI27 1593 aaKnown RBP50.09■■■■■ 5.61
COX4I1-203ENST00000562336 CADPSQ9ULU8 1353 aa50.08■■■■■ 5.61
COX4I1-203ENST00000562336 PDS5BQ9NTI5 1447 aa50.07■■■■■ 5.61
COX4I1-203ENST00000562336 KIF21AQ7Z4S6 1674 aa50.05■■■■■ 5.6
COX4I1-203ENST00000562336 TOP2AP11388 1531 aaKnown RBP49.8■■■■■ 5.56
COX4I1-203ENST00000562336 MRC2Q9UBG0 1479 aa49.63■■■■■ 5.54
COX4I1-203ENST00000562336 CFTRP13569 1480 aa49.57■■■■■ 5.53
COX4I1-203ENST00000562336 FANCD2Q9BXW9 1451 aa49.51■■■■■ 5.52
COX4I1-203ENST00000562336 CEP164Q9UPV0 1460 aa49.5■■■■■ 5.52
COX4I1-203ENST00000562336 WDR62O43379 1518 aa49.48■■■■■ 5.51
COX4I1-203ENST00000562336 CCDC88BA6NC98 1476 aa49.29■■■■■ 5.48
COX4I1-203ENST00000562336 URB2Q14146 1524 aaKnown RBP49.11■■■■■ 5.45
COX4I1-203ENST00000562336 PRDM2Q13029 1718 aa49.02■■■■■ 5.44
COX4I1-203ENST00000562336 TOPBP1Q92547 1522 aa48.62■■■■■ 5.37
COX4I1-203ENST00000562336 IFT140Q96RY7 1462 aa48.5■■■■■ 5.35
COX4I1-203ENST00000562336 ZNF608Q9ULD9 1512 aaPredicted RBP48.46■■■■■ 5.35
COX4I1-203ENST00000562336 ABCC8Q09428 1581 aa48.46■■■■■ 5.35
COX4I1-203ENST00000562336 DNMBPQ6XZF7 1577 aa48.44■■■■■ 5.35
COX4I1-203ENST00000562336 OSCARQ8IYS5 282 aa48.36■■■■■ 5.33
COX4I1-203ENST00000562336 SUPT5HO00267 1087 aaKnown RBP48.27■■■■■ 5.32
COX4I1-203ENST00000562336 TRIM41Q8WV44 630 aa48.18■■■■■ 5.3
COX4I1-203ENST00000562336 POLA1P09884 1462 aaPredicted RBP48.15■■■■■ 5.3
COX4I1-203ENST00000562336 TARBP1Q13395 1621 aaKnown RBP48.14■■■■■ 5.3
COX4I1-203ENST00000562336 EIF4G3O43432 1585 aaKnown RBP48.14■■■■■ 5.3
COX4I1-203ENST00000562336 AQRO60306 1485 aaKnown RBP eCLIP48.07■■■■■ 5.296e-9■■■■■ 43.9
COX4I1-203ENST00000562336 RAD54L2Q9Y4B4 1467 aa48.02■■■■■ 5.28
COX4I1-203ENST00000562336 SOGA1O94964 1423 aa47.95■■■■■ 5.27
COX4I1-203ENST00000562336 CUX1P39880 1505 aa47.94■■■■■ 5.26
COX4I1-203ENST00000562336 FGD5Q6ZNL6 1462 aa47.91■■■■■ 5.26
COX4I1-203ENST00000562336 TDRD9Q8NDG6 1382 aaKnown RBP47.85■■■■■ 5.25
COX4I1-203ENST00000562336 CHD1O14646 1710 aa47.71■■■■■ 5.23
COX4I1-203ENST00000562336 FBLN2P98095 1184 aa47.69■■■■■ 5.22
COX4I1-203ENST00000562336 RIMBP3CA6NJZ7 1639 aa47.68■■■■■ 5.22
COX4I1-203ENST00000562336 RIMBP3BA6NNM3 1639 aa47.68■■■■■ 5.22
COX4I1-203ENST00000562336 RIMBP3Q9UFD9 1639 aa47.68■■■■■ 5.22
COX4I1-203ENST00000562336 WDR97A6NE52 1622 aa47.58■■■■■ 5.21
COX4I1-203ENST00000562336 ARHGEF11O15085 1522 aa47.57■■■■■ 5.21
COX4I1-203ENST00000562336 SNAPC4Q5SXM2 1469 aa47.56■■■■■ 5.2
COX4I1-203ENST00000562336 GRIN2BQ13224 1484 aa47.46■■■■■ 5.19
COX4I1-203ENST00000562336 MAGI1Q96QZ7 1491 aaPredicted RBP47.39■■■■■ 5.18
COX4I1-203ENST00000562336 CHMP7Q8WUX9 453 aaPredicted RBP47.36■■■■■ 5.17
COX4I1-203ENST00000562336 ABCA10Q8WWZ4 1543 aa47.35■■■■■ 5.17
COX4I1-203ENST00000562336 GAPVD1Q14C86 1478 aa47.35■■■■■ 5.17
COX4I1-203ENST00000562336 PBRM1Q86U86 1689 aa47.27■■■■■ 5.16
COX4I1-203ENST00000562336 WRNQ14191 1432 aaPredicted RBP eCLIP47.27■■■■■ 5.161e-6■□□□□ 10.2
COX4I1-203ENST00000562336 CYB5RLQ6IPT4 315 aa47.25■■■■■ 5.15
COX4I1-203ENST00000562336 SYNJ2O15056 1496 aa47.25■■■■■ 5.15
COX4I1-203ENST00000562336 ABCA5Q8WWZ7 1642 aa47.24■■■■■ 5.15
COX4I1-203ENST00000562336 SYNJ1O43426 1573 aa47.23■■■■■ 5.15
COX4I1-203ENST00000562336 TOP2BQ02880 1626 aa47.23■■■■■ 5.15
COX4I1-203ENST00000562336 BIVM-ERCC5R4GMW8 1640 aa47.22■■■■■ 5.15
COX4I1-203ENST00000562336 CLASP1Q7Z460 1538 aa47.19■■■■■ 5.14
COX4I1-203ENST00000562336 ARAP1Q96P48 1450 aa47.15■■■■■ 5.14
COX4I1-203ENST00000562336 ADAMTS12P58397 1594 aa46.86■■■■■ 5.09
COX4I1-203ENST00000562336 GRIN2AQ12879 1464 aa46.86■■■■■ 5.09
COX4I1-203ENST00000562336 FHAD1B1AJZ9 1412 aa46.76■■■■■ 5.08
COX4I1-203ENST00000562336 ERICH3Q5RHP9 1530 aa46.74■■■■■ 5.07
COX4I1-203ENST00000562336 NUP160Q12769 1436 aa46.69■■■■■ 5.06
COX4I1-203ENST00000562336 CEP170Q5SW79 1584 aa46.69■■■■■ 5.06
COX4I1-203ENST00000562336 TRHP20396 242 aaPredicted RBP46.6■■■■■ 5.05
COX4I1-203ENST00000562336 ERCC6L2Q5T890 1561 aa46.55■■■■■ 5.04
COX4I1-203ENST00000562336 SHROOM2Q13796 1616 aa46.4■■■■■ 5.02
COX4I1-203ENST00000562336 KIF27Q86VH2 1401 aa46.32■■■■■ 5.01
COX4I1-203ENST00000562336 IGF1RP08069 1367 aa46.32■■■■■ 5.01
COX4I1-203ENST00000562336 JPH4Q96JJ6 628 aa46.25■■■■■ 4.99
COX4I1-203ENST00000562336 PRG4Q92954 1404 aaPredicted RBP46.24■■■■■ 4.99
Retrieved 100 of 20,778 RNA–protein pairs in 8 ms