RNA–Protein interactions for RNA: ENST00000396388.2

TSEN34-203, Transcript of tRNA splicing endonuclease subunit 34, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSEN34, Length 1,349 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSEN34-203ENST00000396388 NISCHQ9Y2I1 1504 aa64.98■■■■■ 7.99
TSEN34-203ENST00000396388 CCDC180Q9P1Z9 1646 aa57.81■■■■■ 6.85
TSEN34-203ENST00000396388 ABCC9O60706 1549 aa56.61■■■■■ 6.65
TSEN34-203ENST00000396388 RB1CC1Q8TDY2 1594 aa54.4■■■■■ 6.3
TSEN34-203ENST00000396388 NACADO15069 1562 aa54.35■■■■■ 6.29
TSEN34-203ENST00000396388 DCAF8L2P0C7V8 631 aa54.19■■■■■ 6.27
TSEN34-203ENST00000396388 ZCCHC6Q5VYS8 1495 aaKnown RBP54.12■■■■■ 6.25
TSEN34-203ENST00000396388 MYO15BQ96JP2 1530 aa54.02■■■■■ 6.24
TSEN34-203ENST00000396388 DCAF1Q9Y4B6 1507 aa53.77■■■■■ 6.2
TSEN34-203ENST00000396388 UNC13AQ9UPW8 1703 aa53.29■■■■■ 6.12
TSEN34-203ENST00000396388 PABPN1Q86U42 306 aaKnown RBP eCLIP52.88■■■■■ 6.06
TSEN34-203ENST00000396388 BICRAQ9NZM4 1560 aa52.86■■■■■ 6.05
TSEN34-203ENST00000396388 SCRIBQ14160 1630 aa52.73■■■■■ 6.03
TSEN34-203ENST00000396388 SHROOM4Q9ULL8 1493 aa52.21■■■■■ 5.95
TSEN34-203ENST00000396388 DNAJC5BQ9UF47 199 aa52.1■■■■■ 5.93
TSEN34-203ENST00000396388 EIF4G1Q04637 1599 aaKnown RBP51.42■■■■■ 5.82
TSEN34-203ENST00000396388 CC2D2AQ9P2K1 1620 aa51.23■■■■■ 5.79
TSEN34-203ENST00000396388 CECR2Q9BXF3 1484 aa50.86■■■■■ 5.73
TSEN34-203ENST00000396388 SMARCA4P51532 1647 aa50.45■■■■■ 5.67
TSEN34-203ENST00000396388 BAZ1AQ9NRL2 1556 aaPredicted RBP50.34■■■■■ 5.65
TSEN34-203ENST00000396388 ATAD2BQ9ULI0 1458 aa50.18■■■■■ 5.62
TSEN34-203ENST00000396388 NCAPD3P42695 1498 aa50.17■■■■■ 5.62
TSEN34-203ENST00000396388 MROH2BQ7Z745 1585 aa50.1■■■■■ 5.61
TSEN34-203ENST00000396388 SMARCA2P51531 1590 aa50.09■■■■■ 5.61
TSEN34-203ENST00000396388 PEG3Q9GZU2 1588 aa49.98■■■■■ 5.59
TSEN34-203ENST00000396388 HMGXB3Q12766 1538 aa49.91■■■■■ 5.58
TSEN34-203ENST00000396388 BAZ1BQ9UIG0 1483 aaKnown RBP49.72■■■■■ 5.55
TSEN34-203ENST00000396388 WIZO95785 1651 aa49.56■■■■■ 5.52
TSEN34-203ENST00000396388 RSF1Q96T23 1441 aaPredicted RBP49.48■■■■■ 5.51
TSEN34-203ENST00000396388 NESP48681 1621 aa49■■■■■ 5.43
TSEN34-203ENST00000396388 TOP2AP11388 1531 aaKnown RBP49■■■■■ 5.43
TSEN34-203ENST00000396388 LAMC3Q9Y6N6 1575 aa48.84■■■■■ 5.41
TSEN34-203ENST00000396388 ERCC6Q03468 1493 aa48.74■■■■■ 5.39
TSEN34-203ENST00000396388 CADPSQ9ULU8 1353 aa48.67■■■■■ 5.38
TSEN34-203ENST00000396388 PDS5BQ9NTI5 1447 aa48.47■■■■■ 5.35
TSEN34-203ENST00000396388 KIF21AQ7Z4S6 1674 aa48.44■■■■■ 5.34
TSEN34-203ENST00000396388 CCDC88BA6NC98 1476 aa48.44■■■■■ 5.34
TSEN34-203ENST00000396388 CFTRP13569 1480 aa48.4■■■■■ 5.34
TSEN34-203ENST00000396388 THOC2Q8NI27 1593 aaKnown RBP48.3■■■■■ 5.32
TSEN34-203ENST00000396388 CUX2O14529 1486 aa48.29■■■■■ 5.32
TSEN34-203ENST00000396388 FANCD2Q9BXW9 1451 aa48.12■■■■■ 5.29
TSEN34-203ENST00000396388 SUPT5HO00267 1087 aaKnown RBP48.07■■■■■ 5.29
TSEN34-203ENST00000396388 PRDM2Q13029 1718 aa48.05■■■■■ 5.28
TSEN34-203ENST00000396388 CEP164Q9UPV0 1460 aa48.04■■■■■ 5.28
TSEN34-203ENST00000396388 MRC2Q9UBG0 1479 aa48.01■■■■■ 5.28
TSEN34-203ENST00000396388 WDR62O43379 1518 aa47.89■■■■■ 5.26
TSEN34-203ENST00000396388 URB2Q14146 1524 aaKnown RBP47.68■■■■■ 5.22
TSEN34-203ENST00000396388 TOPBP1Q92547 1522 aa47.36■■■■■ 5.17
TSEN34-203ENST00000396388 ABCC8Q09428 1581 aa47.3■■■■■ 5.16
TSEN34-203ENST00000396388 DNMBPQ6XZF7 1577 aa47.29■■■■■ 5.16
TSEN34-203ENST00000396388 IFT140Q96RY7 1462 aa47.05■■■■■ 5.12
TSEN34-203ENST00000396388 CUX1P39880 1505 aa47■■■■■ 5.11
TSEN34-203ENST00000396388 POLA1P09884 1462 aaPredicted RBP46.95■■■■■ 5.11
TSEN34-203ENST00000396388 DNAJC5Q9H3Z4 198 aa46.91■■■■■ 5.1
TSEN34-203ENST00000396388 ZNF608Q9ULD9 1512 aaPredicted RBP46.9■■■■■ 5.1
TSEN34-203ENST00000396388 TARBP1Q13395 1621 aaKnown RBP46.89■■■■■ 5.1
TSEN34-203ENST00000396388 FGD5Q6ZNL6 1462 aa46.82■■■■■ 5.09
TSEN34-203ENST00000396388 RAD54L2Q9Y4B4 1467 aa46.75■■■■■ 5.08
TSEN34-203ENST00000396388 SOGA1O94964 1423 aa46.73■■■■■ 5.07
TSEN34-203ENST00000396388 EIF4G3O43432 1585 aaKnown RBP46.7■■■■■ 5.07
TSEN34-203ENST00000396388 WRNQ14191 1432 aaPredicted RBP eCLIP46.61■■■■■ 5.05
TSEN34-203ENST00000396388 AQRO60306 1485 aaKnown RBP eCLIP46.6■■■■■ 5.055e-6■■■■□ 24
TSEN34-203ENST00000396388 BIVM-ERCC5R4GMW8 1640 aa46.57■■■■■ 5.05
TSEN34-203ENST00000396388 SYNJ1O43426 1573 aa46.57■■■■■ 5.05
TSEN34-203ENST00000396388 TOP2BQ02880 1626 aa46.56■■■■■ 5.04
TSEN34-203ENST00000396388 WDR97A6NE52 1622 aa46.5■■■■■ 5.03
TSEN34-203ENST00000396388 TDRD9Q8NDG6 1382 aaKnown RBP46.49■■■■■ 5.03
TSEN34-203ENST00000396388 ABCA10Q8WWZ4 1543 aa46.37■■■■■ 5.01
TSEN34-203ENST00000396388 OSCARQ8IYS5 282 aa46.25■■■■■ 4.99
TSEN34-203ENST00000396388 ABCA5Q8WWZ7 1642 aa46.22■■■■■ 4.99
TSEN34-203ENST00000396388 GAPVD1Q14C86 1478 aa46.2■■■■■ 4.99
TSEN34-203ENST00000396388 GRIN2BQ13224 1484 aa46.19■■■■■ 4.98
TSEN34-203ENST00000396388 SNAPC4Q5SXM2 1469 aa46.16■■■■■ 4.98
TSEN34-203ENST00000396388 PBRM1Q86U86 1689 aa46.15■■■■■ 4.98
TSEN34-203ENST00000396388 CHD1O14646 1710 aa46.14■■■■■ 4.98
TSEN34-203ENST00000396388 MAGI1Q96QZ7 1491 aaPredicted RBP46.09■■■■■ 4.97
TSEN34-203ENST00000396388 FBLN2P98095 1184 aa45.96■■■■■ 4.95
TSEN34-203ENST00000396388 SYNJ2O15056 1496 aa45.91■■■■■ 4.94
TSEN34-203ENST00000396388 CHMP7Q8WUX9 453 aaPredicted RBP45.84■■■■■ 4.93
TSEN34-203ENST00000396388 ERICH3Q5RHP9 1530 aa45.81■■■■■ 4.92
TSEN34-203ENST00000396388 ADAMTS12P58397 1594 aa45.77■■■■■ 4.92
TSEN34-203ENST00000396388 FHAD1B1AJZ9 1412 aa45.65■■■■■ 4.9
TSEN34-203ENST00000396388 CLASP1Q7Z460 1538 aa45.65■■■■■ 4.9
TSEN34-203ENST00000396388 KIF27Q86VH2 1401 aa45.62■■■■■ 4.89
TSEN34-203ENST00000396388 GRIN2AQ12879 1464 aa45.62■■■■■ 4.89
TSEN34-203ENST00000396388 RIMBP3CA6NJZ7 1639 aa45.59■■■■■ 4.89
TSEN34-203ENST00000396388 RIMBP3BA6NNM3 1639 aa45.59■■■■■ 4.89
TSEN34-203ENST00000396388 RIMBP3Q9UFD9 1639 aa45.59■■■■■ 4.89
TSEN34-203ENST00000396388 ARHGEF11O15085 1522 aa45.56■■■■■ 4.88
TSEN34-203ENST00000396388 IGF1RP08069 1367 aa45.51■■■■■ 4.88
TSEN34-203ENST00000396388 NUP160Q12769 1436 aa45.44■■■■■ 4.87
TSEN34-203ENST00000396388 CEP170Q5SW79 1584 aa45.43■■■■■ 4.86
TSEN34-203ENST00000396388 TRIM41Q8WV44 630 aa45.4■■■■■ 4.86
TSEN34-203ENST00000396388 CUL7Q14999 1698 aa45.37■■■■■ 4.85
TSEN34-203ENST00000396388 RUSC2Q8N2Y8 1516 aa45.28■■■■■ 4.84
TSEN34-203ENST00000396388 ARAP1Q96P48 1450 aa45.21■■■■■ 4.83
TSEN34-203ENST00000396388 CARMIL1Q5VZK9 1371 aa45.19■■■■■ 4.83
TSEN34-203ENST00000396388 SHROOM2Q13796 1616 aa45.13■■■■■ 4.82
TSEN34-203ENST00000396388 CYB5RLQ6IPT4 315 aa45.08■■■■■ 4.81
TSEN34-203ENST00000396388 ERCC6L2Q5T890 1561 aa45.03■■■■■ 4.8
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms