Protein–RNA interactions for Protein: Q9Y5F9

PCDHGB6, Protocadherin gamma-B6, humanhuman

Predictions only

Length 930 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB6Q9Y5F9 FBLL1-201ENST00000338333 1519 ntAPPRIS P1 BASIC31.52■■■□□ 2.64
PCDHGB6Q9Y5F9 SSSCA1-205ENST00000527920 806 ntTSL 3 BASIC30.96■■■□□ 2.55
PCDHGB6Q9Y5F9 PPP1CA-203ENST00000376745 1476 ntAPPRIS P1 TSL 1 (best) BASIC30.7■■■□□ 2.5
PCDHGB6Q9Y5F9 TCF15-201ENST00000246080 1555 ntAPPRIS P1 TSL 1 (best) BASIC30.66■■■□□ 2.5
PCDHGB6Q9Y5F9 AES-202ENST00000327141 1608 ntAPPRIS P1 TSL 1 (best) BASIC30.48■■■□□ 2.47
PCDHGB6Q9Y5F9 HRAS-203ENST00000397596 1100 ntAPPRIS P1 TSL 3 BASIC30.42■■■□□ 2.46
PCDHGB6Q9Y5F9 CSNK1E-204ENST00000403904 1580 ntAPPRIS P1 TSL 5 BASIC30.41■■■□□ 2.46
PCDHGB6Q9Y5F9 AC116565.1-201ENST00000610212 2421 ntAPPRIS P1 BASIC30.41■■■□□ 2.46
PCDHGB6Q9Y5F9 AL356512.1-201ENST00000607453 1739 ntBASIC30.26■■■□□ 2.43
PCDHGB6Q9Y5F9 HES6-203ENST00000409160 1600 ntTSL 2 BASIC29.9■■■□□ 2.38
PCDHGB6Q9Y5F9 FBRSL1-201ENST00000434748 5568 ntAPPRIS P2 TSL 1 (best) BASIC29.68■■■□□ 2.34
PCDHGB6Q9Y5F9 ANKRD60-201ENST00000457363 1038 ntAPPRIS P1 TSL 5 BASIC29.64■■■□□ 2.34
PCDHGB6Q9Y5F9 SEPT3-204ENST00000406029 1866 ntTSL 5 BASIC29.57■■■□□ 2.32
PCDHGB6Q9Y5F9 PRR5-217ENST00000617066 1726 ntTSL 5 BASIC29.54■■■□□ 2.32
PCDHGB6Q9Y5F9 PHF10-201ENST00000339209 1719 ntAPPRIS P4 TSL 1 (best) BASIC29.51■■■□□ 2.31
PCDHGB6Q9Y5F9 FOXD1-202ENST00000615637 2272 ntAPPRIS P1 BASIC29.5■■■□□ 2.31
PCDHGB6Q9Y5F9 OLFM1-208ENST00000392991 1057 ntTSL 2 BASIC29.47■■■□□ 2.31
PCDHGB6Q9Y5F9 PPP2CB-204ENST00000518564 691 ntTSL 3 BASIC29.46■■■□□ 2.31
PCDHGB6Q9Y5F9 ZFYVE21-201ENST00000216602 1521 ntAPPRIS ALT2 TSL 2 BASIC29.45■■■□□ 2.3
PCDHGB6Q9Y5F9 TAF5L-202ENST00000366674 492 ntTSL 3 BASIC29.38■■■□□ 2.29
PCDHGB6Q9Y5F9 RAB12-201ENST00000329286 2137 ntAPPRIS P1 TSL 1 (best) BASIC29.37■■■□□ 2.29
PCDHGB6Q9Y5F9 PRR5-216ENST00000611394 1843 ntTSL 2 BASIC29.29■■■□□ 2.28
PCDHGB6Q9Y5F9 MPND-201ENST00000262966 1567 ntAPPRIS P3 TSL 1 (best) BASIC29.17■■■□□ 2.26
PCDHGB6Q9Y5F9 PPP2CB-201ENST00000221138 2006 ntAPPRIS P1 TSL 1 (best) BASIC29.13■■■□□ 2.25
PCDHGB6Q9Y5F9 CACNG8-202ENST00000638874 1278 ntAPPRIS P2 TSL 1 (best) BASIC29.07■■■□□ 2.24
PCDHGB6Q9Y5F9 CDV3-203ENST00000431519 955 ntTSL 1 (best) BASIC28.97■■■□□ 2.23
PCDHGB6Q9Y5F9 PTF1A-201ENST00000376504 1537 ntAPPRIS P1 TSL 1 (best) BASIC28.96■■■□□ 2.23
PCDHGB6Q9Y5F9 GALR3-201ENST00000249041 1157 ntAPPRIS P1 TSL 1 (best) BASIC28.96■■■□□ 2.23
PCDHGB6Q9Y5F9 GIPC1-205ENST00000586027 1386 ntAPPRIS P1 TSL 2 BASIC28.84■■■□□ 2.21
PCDHGB6Q9Y5F9 C11orf63-202ENST00000307257 1964 ntTSL 2 BASIC28.69■■■□□ 2.18
PCDHGB6Q9Y5F9 ACOT7-209ENST00000545482 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC28.62■■■□□ 2.17
PCDHGB6Q9Y5F9 CMTM4-202ENST00000394106 1187 ntAPPRIS P1 TSL 1 (best) BASIC28.62■■■□□ 2.17
PCDHGB6Q9Y5F9 CMTM4-204ENST00000563952 1023 ntTSL 1 (best) BASIC28.62■■■□□ 2.17
PCDHGB6Q9Y5F9 ALYREF-202ENST00000505490 1088 ntAPPRIS P1 TSL 1 (best) BASIC28.58■■■□□ 2.17
PCDHGB6Q9Y5F9 FAM89B-203ENST00000530349 1263 ntAPPRIS P1 TSL 2 BASIC28.56■■■□□ 2.16
PCDHGB6Q9Y5F9 AL357033.3-201ENST00000620143 614 ntTSL 3 BASIC28.56■■■□□ 2.16
PCDHGB6Q9Y5F9 KHSRP-213ENST00000619396 2226 ntAPPRIS ALT2 TSL 5 BASIC28.54■■■□□ 2.16
PCDHGB6Q9Y5F9 INO80B-201ENST00000233331 1261 ntAPPRIS P1 TSL 1 (best) BASIC28.54■■■□□ 2.16
PCDHGB6Q9Y5F9 NECTIN3-201ENST00000319792 1549 ntAPPRIS ALT2 TSL 1 (best) BASIC28.5■■■□□ 2.15
PCDHGB6Q9Y5F9 CYHR1-209ENST00000530374 1870 ntTSL 3 BASIC28.42■■■□□ 2.14
PCDHGB6Q9Y5F9 TGIF1-202ENST00000343820 2076 ntAPPRIS P1 TSL 1 (best) BASIC28.41■■■□□ 2.14
PCDHGB6Q9Y5F9 SLC25A28-201ENST00000370495 1451 ntAPPRIS P1 TSL 1 (best) BASIC28.39■■■□□ 2.13
PCDHGB6Q9Y5F9 INO80B-203ENST00000409917 796 ntTSL 2 BASIC28.37■■■□□ 2.13
PCDHGB6Q9Y5F9 FAM149A-205ENST00000502970 1990 ntAPPRIS P2 TSL 5 BASIC28.31■■■□□ 2.12
PCDHGB6Q9Y5F9 CAPNS1-206ENST00000588815 1471 ntAPPRIS P2 TSL 1 (best) BASIC28.3■■■□□ 2.12
PCDHGB6Q9Y5F9 CYBA-201ENST00000261623 797 ntAPPRIS P1 TSL 1 (best) BASIC28.13■■■□□ 2.09
PCDHGB6Q9Y5F9 AC015813.7-201ENST00000623294 581 ntBASIC28.08■■■□□ 2.09
PCDHGB6Q9Y5F9 AC006077.2-201ENST00000623591 457 ntBASIC28.08■■■□□ 2.09
PCDHGB6Q9Y5F9 ZNF358-202ENST00000597229 1954 ntAPPRIS P1 TSL 2 BASIC28.07■■■□□ 2.08
PCDHGB6Q9Y5F9 NT5DC2-203ENST00000459839 1639 ntTSL 1 (best) BASIC28.07■■■□□ 2.08
PCDHGB6Q9Y5F9 CSNK1E-206ENST00000413574 1631 ntTSL 5 BASIC28.04■■■□□ 2.08
PCDHGB6Q9Y5F9 AC008738.5-201ENST00000587312 482 ntTSL 3 BASIC28■■■□□ 2.07
PCDHGB6Q9Y5F9 ZNRF2P1-201ENST00000441407 443 ntBASIC27.98■■■□□ 2.07
PCDHGB6Q9Y5F9 SATB1-AS1-216ENST00000598149 1119 ntTSL 2 BASIC27.98■■■□□ 2.07
PCDHGB6Q9Y5F9 UBE2M-201ENST00000253023 1508 ntAPPRIS P1 TSL 1 (best) BASIC27.96■■■□□ 2.07
PCDHGB6Q9Y5F9 MAF-203ENST00000569649 1217 ntAPPRIS ALT2 TSL 5 BASIC27.94■■■□□ 2.06
PCDHGB6Q9Y5F9 MPND-207ENST00000599840 1611 ntAPPRIS ALT2 TSL 5 BASIC27.91■■■□□ 2.06
PCDHGB6Q9Y5F9 NKAIN4-203ENST00000370316 1430 ntAPPRIS P1 TSL 1 (best) BASIC27.87■■■□□ 2.05
PCDHGB6Q9Y5F9 C11orf68-202ENST00000449692 1559 ntAPPRIS P3 TSL 1 (best) BASIC27.86■■■□□ 2.05
PCDHGB6Q9Y5F9 GPI-201ENST00000356487 2210 ntAPPRIS P1 TSL 1 (best) BASIC27.81■■■□□ 2.04
PCDHGB6Q9Y5F9 IFNGR2-201ENST00000290219 2221 ntAPPRIS P3 TSL 1 (best) BASIC27.72■■■□□ 2.03
PCDHGB6Q9Y5F9 TRIP10-202ENST00000313285 2035 ntAPPRIS P1 TSL 1 (best) BASIC27.7■■■□□ 2.03
PCDHGB6Q9Y5F9 PRELID2-202ENST00000394450 1102 ntTSL 1 (best) BASIC27.7■■■□□ 2.02
PCDHGB6Q9Y5F9 CCM2-219ENST00000544363 1620 ntTSL 3 BASIC27.66■■■□□ 2.02
PCDHGB6Q9Y5F9 METRNL-201ENST00000320095 1605 ntAPPRIS P1 TSL 1 (best) BASIC27.65■■■□□ 2.02
PCDHGB6Q9Y5F9 FAM149A-215ENST00000514153 2070 ntAPPRIS P2 TSL 5 BASIC27.63■■■□□ 2.01
PCDHGB6Q9Y5F9 HAGHL-201ENST00000341413 1701 ntTSL 2 BASIC27.55■■■□□ 2
PCDHGB6Q9Y5F9 FAM89B-202ENST00000449319 1337 ntTSL 1 (best) BASIC27.51■■□□□ 1.99
PCDHGB6Q9Y5F9 NT5M-207ENST00000616989 1635 ntTSL 1 (best) BASIC27.49■■□□□ 1.99
PCDHGB6Q9Y5F9 ARTN-201ENST00000372354 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC27.43■■□□□ 1.98
PCDHGB6Q9Y5F9 ADRA1D-201ENST00000379453 2728 ntAPPRIS P1 TSL 1 (best) BASIC27.42■■□□□ 1.98
PCDHGB6Q9Y5F9 INO80B-WBP1-202ENST00000452361 2040 ntAPPRIS P5 TSL 2 BASIC27.4■■□□□ 1.98
PCDHGB6Q9Y5F9 PLPPR3-204ENST00000520876 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC27.38■■□□□ 1.97
PCDHGB6Q9Y5F9 FEZF2-201ENST00000283268 2074 ntAPPRIS P1 TSL 1 (best) BASIC27.37■■□□□ 1.97
PCDHGB6Q9Y5F9 HOXB3-208ENST00000476342 1420 ntAPPRIS P1 TSL 1 (best) BASIC27.31■■□□□ 1.96
PCDHGB6Q9Y5F9 C11orf84-201ENST00000294244 2024 ntAPPRIS P1 TSL 1 (best) BASIC27.27■■□□□ 1.96
PCDHGB6Q9Y5F9 MAPK3-201ENST00000263025 1861 ntAPPRIS P3 TSL 1 (best) BASIC27.27■■□□□ 1.96
PCDHGB6Q9Y5F9 AP002365.1-201ENST00000603448 772 ntBASIC27.26■■□□□ 1.95
PCDHGB6Q9Y5F9 NT5DC2-202ENST00000422318 1795 ntAPPRIS ALT2 TSL 5 BASIC27.25■■□□□ 1.95
PCDHGB6Q9Y5F9 SYNGR1-202ENST00000318801 1361 ntTSL 1 (best) BASIC27.24■■□□□ 1.95
PCDHGB6Q9Y5F9 CLEC3B-201ENST00000296130 936 ntAPPRIS P1 TSL 1 (best) BASIC27.22■■□□□ 1.95
PCDHGB6Q9Y5F9 AC079848.1-201ENST00000511301 327 ntTSL 3 BASIC27.22■■□□□ 1.95
PCDHGB6Q9Y5F9 RAN-202ENST00000392369 1530 ntAPPRIS P1 TSL 1 (best) BASIC27.21■■□□□ 1.95
PCDHGB6Q9Y5F9 B4GALT2-203ENST00000372324 2203 ntAPPRIS P1 TSL 1 (best) BASIC27.2■■□□□ 1.94
PCDHGB6Q9Y5F9 ILK-212ENST00000532063 1617 ntTSL 2 BASIC27.19■■□□□ 1.94
PCDHGB6Q9Y5F9 FGF2-203ENST00000614010 867 ntTSL 1 (best) BASIC27.18■■□□□ 1.94
PCDHGB6Q9Y5F9 LIMCH1-211ENST00000509638 1570 ntTSL 1 (best) BASIC27.16■■□□□ 1.94
PCDHGB6Q9Y5F9 AL136373.1-201ENST00000634804 1449 ntAPPRIS P1 BASIC27.1■■□□□ 1.93
PCDHGB6Q9Y5F9 PWWP2B-202ENST00000631148 2013 ntTSL 5 BASIC27.1■■□□□ 1.93
PCDHGB6Q9Y5F9 CHCHD4-202ENST00000396914 1405 ntAPPRIS P1 TSL 1 (best) BASIC27.09■■□□□ 1.93
PCDHGB6Q9Y5F9 H2AFV-202ENST00000308153 752 ntAPPRIS P4 TSL 1 (best) BASIC27.08■■□□□ 1.93
PCDHGB6Q9Y5F9 AC005524.1-203ENST00000586528 451 ntTSL 3 BASIC27.08■■□□□ 1.93
PCDHGB6Q9Y5F9 FAM58A-202ENST00000440428 1164 ntAPPRIS P2 TSL 2 BASIC27.06■■□□□ 1.92
PCDHGB6Q9Y5F9 LINC01578-201ENST00000553829 732 ntTSL 2 BASIC27.06■■□□□ 1.92
PCDHGB6Q9Y5F9 TPRG1L-201ENST00000344579 2189 ntTSL 1 (best) BASIC27.04■■□□□ 1.92
PCDHGB6Q9Y5F9 SSBP3-204ENST00000371320 2077 ntAPPRIS P3 TSL 1 (best) BASIC27.02■■□□□ 1.92
PCDHGB6Q9Y5F9 AGTRAP-204ENST00000376637 1067 ntTSL 2 BASIC27■■□□□ 1.91
PCDHGB6Q9Y5F9 PABPN1-201ENST00000216727 2001 ntAPPRIS P2 TSL 1 (best) BASIC27■■□□□ 1.91
PCDHGB6Q9Y5F9 NRGN-201ENST00000284292 1306 ntAPPRIS P1 TSL 1 (best) BASIC26.99■■□□□ 1.91
PCDHGB6Q9Y5F9 ECHS1-201ENST00000368547 1617 ntAPPRIS P1 TSL 1 (best) BASIC26.99■■□□□ 1.91
Retrieved 100 of 98,524 protein–RNA pairs in 14.5 ms