Protein–RNA interactions for Protein: Q8N1N0

CLEC4F, C-type lectin domain family 4 member F, humanhuman

Predictions only

Length 589 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLEC4FQ8N1N0 SH3GL3-202ENST00000427482 1806 ntAPPRIS P1 TSL 1 (best) BASIC25.33■■□□□ 1.64
CLEC4FQ8N1N0 NRGN-202ENST00000412681 1106 ntAPPRIS P1 TSL 1 (best) BASIC25.32■■□□□ 1.64
CLEC4FQ8N1N0 ARPC5L-202ENST00000353214 2507 ntAPPRIS P1 TSL 2 BASIC25.32■■□□□ 1.64
CLEC4FQ8N1N0 SIRT3-201ENST00000382743 2543 ntAPPRIS P2 TSL 1 (best) BASIC25.32■■□□□ 1.64
CLEC4FQ8N1N0 SSBP4-202ENST00000348495 1721 ntAPPRIS ALT1 TSL 2 BASIC25.32■■□□□ 1.64
CLEC4FQ8N1N0 PI4KAP1-202ENST00000611748 1906 ntTSL 1 (best) BASIC25.31■■□□□ 1.64
CLEC4FQ8N1N0 PQLC1-203ENST00000397778 2555 ntAPPRIS P3 TSL 1 (best) BASIC25.31■■□□□ 1.64
CLEC4FQ8N1N0 KCTD17-202ENST00000403888 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC25.31■■□□□ 1.64
CLEC4FQ8N1N0 HDAC3-201ENST00000305264 1959 ntAPPRIS P1 TSL 1 (best) BASIC25.3■■□□□ 1.64
CLEC4FQ8N1N0 VWA1-201ENST00000338660 2147 ntTSL 2 BASIC25.3■■□□□ 1.64
CLEC4FQ8N1N0 NRTN-201ENST00000303212 1109 ntAPPRIS P1 TSL 1 (best) BASIC25.28■■□□□ 1.64
CLEC4FQ8N1N0 CNIH2-203ENST00000528852 1524 ntAPPRIS ALT1 TSL 1 (best) BASIC25.27■■□□□ 1.64
CLEC4FQ8N1N0 LDB1-202ENST00000425280 2089 ntTSL 5 BASIC25.27■■□□□ 1.64
CLEC4FQ8N1N0 CUL4A-202ENST00000375440 2364 ntAPPRIS P1 TSL 1 (best) BASIC25.27■■□□□ 1.64
CLEC4FQ8N1N0 RASSF8-202ENST00000381352 2320 ntTSL 1 (best) BASIC25.25■■□□□ 1.63
CLEC4FQ8N1N0 TCEA2-204ENST00000395053 1733 ntTSL 1 (best) BASIC25.25■■□□□ 1.63
CLEC4FQ8N1N0 HNRNPAB-206ENST00000506339 1747 ntAPPRIS ALT2 TSL 5 BASIC25.25■■□□□ 1.63
CLEC4FQ8N1N0 GALK1-205ENST00000588479 1866 ntAPPRIS P1 TSL 1 (best) BASIC25.25■■□□□ 1.63
CLEC4FQ8N1N0 TM6SF1-202ENST00000322019 2074 ntAPPRIS P1 TSL 1 (best) BASIC25.25■■□□□ 1.63
CLEC4FQ8N1N0 ABHD17A-201ENST00000250974 1630 ntTSL 1 (best) BASIC25.24■■□□□ 1.63
CLEC4FQ8N1N0 KLF16-203ENST00000592313 508 ntTSL 3 BASIC25.24■■□□□ 1.63
CLEC4FQ8N1N0 FAM117A-201ENST00000240364 2365 ntAPPRIS P2 TSL 1 (best) BASIC25.24■■□□□ 1.63
CLEC4FQ8N1N0 SECTM1-201ENST00000269389 2235 ntAPPRIS P2 TSL 1 (best) BASIC25.22■■□□□ 1.63
CLEC4FQ8N1N0 AC025431.1-201ENST00000559684 874 ntTSL 3 BASIC25.22■■□□□ 1.63
CLEC4FQ8N1N0 ST7-AS1-201ENST00000456775 1889 ntBASIC25.21■■□□□ 1.63
CLEC4FQ8N1N0 PGM5-201ENST00000396392 1782 ntTSL 1 (best) BASIC25.21■■□□□ 1.63
CLEC4FQ8N1N0 HES7-202ENST00000541682 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC25.21■■□□□ 1.63
CLEC4FQ8N1N0 MAGI2-215ENST00000628980 6212 ntTSL 5 BASIC25.21■■□□□ 1.63
CLEC4FQ8N1N0 AMN-201ENST00000299155 1907 ntAPPRIS P2 TSL 1 (best) BASIC25.21■■□□□ 1.63
CLEC4FQ8N1N0 PURG-201ENST00000339382 2693 ntTSL 1 (best) BASIC25.2■■□□□ 1.63
CLEC4FQ8N1N0 CADPS-215ENST00000490353 2669 ntTSL 5 BASIC25.2■■□□□ 1.62
CLEC4FQ8N1N0 SPIRE1-203ENST00000410092 5533 ntAPPRIS P3 TSL 1 (best) BASIC25.19■■□□□ 1.62
CLEC4FQ8N1N0 TP53I13-201ENST00000301057 1530 ntAPPRIS P2 TSL 1 (best) BASIC25.18■■□□□ 1.62
CLEC4FQ8N1N0 AC079305.1-201ENST00000428541 499 ntTSL 3 BASIC25.18■■□□□ 1.62
CLEC4FQ8N1N0 CDK2AP1-203ENST00000535979 1281 ntTSL 3 BASIC25.18■■□□□ 1.62
CLEC4FQ8N1N0 LINC01089-207ENST00000538335 630 ntTSL 3 BASIC25.18■■□□□ 1.62
CLEC4FQ8N1N0 EMC10-202ENST00000376918 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC25.18■■□□□ 1.62
CLEC4FQ8N1N0 WDSUB1-205ENST00000409990 1920 ntAPPRIS P1 TSL 2 BASIC25.18■■□□□ 1.62
CLEC4FQ8N1N0 ARL8A-201ENST00000272217 1793 ntAPPRIS P1 TSL 1 (best) BASIC25.17■■□□□ 1.62
CLEC4FQ8N1N0 GAL3ST1-205ENST00000406361 1819 ntAPPRIS P1 TSL 2 BASIC25.16■■□□□ 1.62
CLEC4FQ8N1N0 TSPAN33-201ENST00000486685 1863 ntAPPRIS P1 TSL 1 (best) BASIC25.16■■□□□ 1.62
CLEC4FQ8N1N0 PDPK1-203ENST00000389224 2416 ntTSL 2 BASIC25.16■■□□□ 1.62
CLEC4FQ8N1N0 ITGA9-203ENST00000422441 2282 ntTSL 1 (best) BASIC25.16■■□□□ 1.62
CLEC4FQ8N1N0 RNF150-204ENST00000507500 1530 ntTSL 1 (best) BASIC25.16■■□□□ 1.62
CLEC4FQ8N1N0 TSPAN11-203ENST00000545802 1649 ntTSL 1 (best) BASIC25.15■■□□□ 1.62
CLEC4FQ8N1N0 KCNQ5-204ENST00000370392 1469 ntTSL 1 (best) BASIC25.15■■□□□ 1.62
CLEC4FQ8N1N0 LRRC61-202ENST00000359623 1877 ntAPPRIS P1 TSL 2 BASIC25.15■■□□□ 1.62
CLEC4FQ8N1N0 COL13A1-203ENST00000398969 2267 ntAPPRIS ALT2 TSL 5 BASIC25.15■■□□□ 1.62
CLEC4FQ8N1N0 CERS2-205ENST00000368954 2505 ntAPPRIS P1 TSL 1 (best) BASIC25.15■■□□□ 1.62
CLEC4FQ8N1N0 CBX4-202ENST00000448310 718 ntAPPRIS ALT2 TSL 3 BASIC25.15■■□□□ 1.62
CLEC4FQ8N1N0 AL133380.1-201ENST00000506013 324 ntBASIC25.15■■□□□ 1.62
CLEC4FQ8N1N0 RAB26-201ENST00000210187 1675 ntAPPRIS P1 TSL 1 (best) BASIC25.15■■□□□ 1.62
CLEC4FQ8N1N0 FAAP20-204ENST00000400919 1413 ntTSL 3 BASIC25.13■■□□□ 1.61
CLEC4FQ8N1N0 RTN4R-201ENST00000043402 2157 ntAPPRIS P2 TSL 1 (best) BASIC25.13■■□□□ 1.61
CLEC4FQ8N1N0 AGFG1-205ENST00000409979 2089 ntAPPRIS ALT1 TSL 5 BASIC25.13■■□□□ 1.61
CLEC4FQ8N1N0 WASH5P-204ENST00000632292 975 ntBASIC25.12■■□□□ 1.61
CLEC4FQ8N1N0 DPY19L1-209ENST00000638088 5075 ntAPPRIS ALT2 TSL 5 BASIC25.11■■□□□ 1.61
CLEC4FQ8N1N0 HECA-201ENST00000367658 5614 ntAPPRIS P1 TSL 1 (best) BASIC25.11■■□□□ 1.61
CLEC4FQ8N1N0 RAB40C-201ENST00000248139 2699 ntAPPRIS P1 TSL 1 (best) BASIC25.1■■□□□ 1.61
CLEC4FQ8N1N0 YAP1-204ENST00000526343 2393 ntTSL 5 BASIC25.09■■□□□ 1.61
CLEC4FQ8N1N0 AL135925.1-201ENST00000605920 1701 ntBASIC25.09■■□□□ 1.61
CLEC4FQ8N1N0 SENP3-201ENST00000321337 2611 ntAPPRIS P1 TSL 1 (best) BASIC25.08■■□□□ 1.61
CLEC4FQ8N1N0 CCDC88C-205ENST00000553403 1651 ntTSL 1 (best) BASIC25.08■■□□□ 1.61
CLEC4FQ8N1N0 AVEN-201ENST00000306730 1605 ntAPPRIS P1 TSL 1 (best) BASIC25.08■■□□□ 1.6
CLEC4FQ8N1N0 JMJD8-216ENST00000609261 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC25.08■■□□□ 1.6
CLEC4FQ8N1N0 GLRX5-201ENST00000331334 1564 ntAPPRIS P1 TSL 1 (best) BASIC25.07■■□□□ 1.6
CLEC4FQ8N1N0 ADNP-AS1-201ENST00000558899 927 ntTSL 3 BASIC25.07■■□□□ 1.6
CLEC4FQ8N1N0 RAPGEF1-203ENST00000372195 6256 ntTSL 1 (best) BASIC25.07■■□□□ 1.6
CLEC4FQ8N1N0 PCYT2-206ENST00000571105 1628 ntTSL 5 BASIC25.06■■□□□ 1.6
CLEC4FQ8N1N0 GUSB-202ENST00000421103 1742 ntTSL 2 BASIC25.06■■□□□ 1.6
CLEC4FQ8N1N0 TMEM9-201ENST00000367330 1959 ntAPPRIS P3 TSL 1 (best) BASIC25.05■■□□□ 1.6
CLEC4FQ8N1N0 FEV-201ENST00000295727 1879 ntAPPRIS P1 TSL 1 (best) BASIC25.05■■□□□ 1.6
CLEC4FQ8N1N0 FAAH-201ENST00000243167 2094 ntAPPRIS P1 TSL 1 (best) BASIC25.05■■□□□ 1.6
CLEC4FQ8N1N0 SLC52A2-201ENST00000329994 1896 ntAPPRIS P1 TSL 1 (best) BASIC25.04■■□□□ 1.6
CLEC4FQ8N1N0 ZNF219-201ENST00000360947 3071 ntAPPRIS P1 TSL 1 (best) BASIC25.04■■□□□ 1.6
CLEC4FQ8N1N0 IL13RA1-201ENST00000371642 1096 ntTSL 1 (best) BASIC25.01■■□□□ 1.59
CLEC4FQ8N1N0 SLC9A3R2-202ENST00000432365 1564 ntTSL 1 (best) BASIC25■■□□□ 1.59
CLEC4FQ8N1N0 FOXQ1-201ENST00000296839 2309 ntAPPRIS P1 BASIC24.99■■□□□ 1.59
CLEC4FQ8N1N0 RARRES2P7-201ENST00000567349 469 ntBASIC24.99■■□□□ 1.59
CLEC4FQ8N1N0 AC009133.5-201ENST00000562594 473 ntTSL 4 BASIC24.98■■□□□ 1.59
CLEC4FQ8N1N0 CTBP1-201ENST00000290921 2297 ntTSL 1 (best) BASIC24.98■■□□□ 1.59
CLEC4FQ8N1N0 GKAP1-203ENST00000376371 1778 ntAPPRIS P1 TSL 1 (best) BASIC24.98■■□□□ 1.59
CLEC4FQ8N1N0 SIGMAR1-203ENST00000378892 1743 ntTSL 2 BASIC24.98■■□□□ 1.59
CLEC4FQ8N1N0 ARHGAP22-202ENST00000374170 2107 ntTSL 5 BASIC24.97■■□□□ 1.59
CLEC4FQ8N1N0 GABRA5-203ENST00000400081 2761 ntAPPRIS P1 TSL 5 BASIC24.97■■□□□ 1.59
CLEC4FQ8N1N0 C1orf122-204ENST00000468084 1234 ntAPPRIS ALT2 TSL 2 BASIC24.97■■□□□ 1.59
CLEC4FQ8N1N0 SP8-201ENST00000361443 1714 ntAPPRIS P3 TSL 1 (best) BASIC24.97■■□□□ 1.59
CLEC4FQ8N1N0 HNRNPAB-202ENST00000358344 1796 ntAPPRIS P4 TSL 1 (best) BASIC24.96■■□□□ 1.59
CLEC4FQ8N1N0 ATPAF1-201ENST00000329231 1241 ntTSL 2 BASIC24.96■■□□□ 1.59
CLEC4FQ8N1N0 TCFL5-201ENST00000217162 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC24.95■■□□□ 1.59
CLEC4FQ8N1N0 TCFL5-202ENST00000335351 2456 ntAPPRIS P2 TSL 1 (best) BASIC24.95■■□□□ 1.59
CLEC4FQ8N1N0 FOXE3-201ENST00000335071 1981 ntAPPRIS P1 BASIC24.95■■□□□ 1.58
CLEC4FQ8N1N0 CGREF1-204ENST00000402550 1575 ntTSL 2 BASIC24.95■■□□□ 1.58
CLEC4FQ8N1N0 HOOK2-201ENST00000264827 2603 ntAPPRIS P1 TSL 1 (best) BASIC24.95■■□□□ 1.58
CLEC4FQ8N1N0 LGALS3-201ENST00000254301 1146 ntAPPRIS P1 TSL 1 (best) BASIC24.94■■□□□ 1.58
CLEC4FQ8N1N0 TXN-202ENST00000374517 869 ntAPPRIS P1 TSL 1 (best) BASIC24.94■■□□□ 1.58
CLEC4FQ8N1N0 TSPOAP1-AS1-203ENST00000579527 2042 ntTSL 2 BASIC24.94■■□□□ 1.58
CLEC4FQ8N1N0 MXD3-203ENST00000439742 1483 ntAPPRIS P1 TSL 1 (best) BASIC24.94■■□□□ 1.58
CLEC4FQ8N1N0 ZNF787-203ENST00000610935 1925 ntAPPRIS P1 TSL 1 (best) BASIC24.94■■□□□ 1.58
CLEC4FQ8N1N0 LFNG-203ENST00000359574 1377 ntAPPRIS ALT1 TSL 1 (best) BASIC24.93■■□□□ 1.58
Retrieved 100 of 98,524 protein–RNA pairs in 51.5 ms