Protein–RNA interactions for Protein: P42830

CXCL5, C-X-C motif chemokine 5, humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL5P42830 SLC22A23-201ENST00000380298 1574 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
CXCL5P42830 PGM5-201ENST00000396392 1782 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
CXCL5P42830 WDSUB1-205ENST00000409990 1920 ntAPPRIS P1 TSL 2 BASIC17.79■□□□□ 0.44
CXCL5P42830 AC005524.1-203ENST00000586528 451 ntTSL 3 BASIC17.79■□□□□ 0.44
CXCL5P42830 AC243773.2-204ENST00000621428 1462 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
CXCL5P42830 FAM220A-206ENST00000616824 2211 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
CXCL5P42830 RCC1L-202ENST00000614461 2419 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
CXCL5P42830 RRAGC-201ENST00000373001 2732 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CXCL5P42830 RRNAD1-201ENST00000368216 2254 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
CXCL5P42830 CACNG6-201ENST00000252729 1853 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CXCL5P42830 JAG2-202ENST00000347004 5720 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
CXCL5P42830 VWA1-201ENST00000338660 2147 ntTSL 2 BASIC17.77■□□□□ 0.44
CXCL5P42830 PLSCR3-202ENST00000535512 2067 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
CXCL5P42830 PLSCR3-214ENST00000619711 2066 ntTSL 5 BASIC17.77■□□□□ 0.44
CXCL5P42830 OSBP-201ENST00000263847 5083 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
CXCL5P42830 RAB26-201ENST00000210187 1675 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
CXCL5P42830 PQLC1-202ENST00000357575 2475 ntAPPRIS ALT1 TSL 5 BASIC17.76■□□□□ 0.43
CXCL5P42830 HNRNPAB-206ENST00000506339 1747 ntAPPRIS ALT2 TSL 5 BASIC17.76■□□□□ 0.43
CXCL5P42830 SIRT3-201ENST00000382743 2543 ntAPPRIS P2 TSL 1 (best) BASIC17.76■□□□□ 0.43
CXCL5P42830 CHPT1-205ENST00000549872 2001 ntAPPRIS ALT2 TSL 5 BASIC17.76■□□□□ 0.43
CXCL5P42830 SECTM1-201ENST00000269389 2235 ntAPPRIS P2 TSL 1 (best) BASIC17.75■□□□□ 0.43
CXCL5P42830 SHF-206ENST00000560471 2499 ntTSL 5 BASIC17.75■□□□□ 0.43
CXCL5P42830 MSX1-201ENST00000382723 1939 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CXCL5P42830 FZD2-201ENST00000315323 2112 ntAPPRIS P1 BASIC17.74■□□□□ 0.43
CXCL5P42830 SIGMAR1-203ENST00000378892 1743 ntTSL 2 BASIC17.74■□□□□ 0.43
CXCL5P42830 ACTR3B-202ENST00000377776 1566 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
CXCL5P42830 SLC52A2-201ENST00000329994 1896 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CXCL5P42830 CGREF1-202ENST00000312734 1610 ntAPPRIS P2 TSL 5 BASIC17.73■□□□□ 0.43
CXCL5P42830 HES7-202ENST00000541682 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CXCL5P42830 CATIP-201ENST00000289388 1323 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CXCL5P42830 EFNA3-201ENST00000368408 1782 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CXCL5P42830 CHSY1-201ENST00000254190 4550 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CXCL5P42830 FOXE3-201ENST00000335071 1981 ntAPPRIS P1 BASIC17.71■□□□□ 0.43
CXCL5P42830 GAL3ST1-205ENST00000406361 1819 ntAPPRIS P1 TSL 2 BASIC17.71■□□□□ 0.43
CXCL5P42830 ALYREF-202ENST00000505490 1088 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
CXCL5P42830 SSBP4-202ENST00000348495 1721 ntAPPRIS ALT1 TSL 2 BASIC17.7■□□□□ 0.42
CXCL5P42830 ABHD17A-201ENST00000250974 1630 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
CXCL5P42830 CCM2L-201ENST00000262659 2523 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CXCL5P42830 WSB2-201ENST00000315436 2646 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CXCL5P42830 SHOX2-204ENST00000483851 1866 ntAPPRIS ALT2 TSL 2 BASIC17.69■□□□□ 0.42
CXCL5P42830 NKX1-1-201ENST00000422806 1236 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
CXCL5P42830 SENP3-201ENST00000321337 2611 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CXCL5P42830 TARBP1-201ENST00000040877 5130 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CXCL5P42830 TSPAN11-203ENST00000545802 1649 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
CXCL5P42830 TMEM64-201ENST00000418210 4663 ntTSL 2 BASIC17.68■□□□□ 0.42
CXCL5P42830 SAP30-201ENST00000296504 1108 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CXCL5P42830 DYNLL1-207ENST00000549989 719 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CXCL5P42830 DYNLL1-208ENST00000550178 581 ntBASIC17.68■□□□□ 0.42
CXCL5P42830 KCNQ5-204ENST00000370392 1469 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
CXCL5P42830 AP003068.2-202ENST00000526623 1662 ntTSL 2 BASIC17.67■□□□□ 0.42
CXCL5P42830 FOXQ1-201ENST00000296839 2309 ntAPPRIS P1 BASIC17.66■□□□□ 0.42
CXCL5P42830 HMGB1-205ENST00000399494 1282 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
CXCL5P42830 AL135925.1-201ENST00000605920 1701 ntBASIC17.66■□□□□ 0.42
CXCL5P42830 RDX-210ENST00000530301 1549 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
CXCL5P42830 TMEM9-201ENST00000367330 1959 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
CXCL5P42830 CTBP1-201ENST00000290921 2297 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
CXCL5P42830 AVEN-201ENST00000306730 1605 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CXCL5P42830 RTN4R-201ENST00000043402 2157 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
CXCL5P42830 HNRNPAB-202ENST00000358344 1796 ntAPPRIS P4 TSL 1 (best) BASIC17.65■□□□□ 0.42
CXCL5P42830 CHMP4B-201ENST00000217402 1646 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CXCL5P42830 GKAP1-203ENST00000376371 1778 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CXCL5P42830 SLC30A10-202ENST00000366926 1915 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CXCL5P42830 PGM5P2-201ENST00000613141 1980 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
CXCL5P42830 IL17D-201ENST00000304920 1861 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CXCL5P42830 HAUS7-201ENST00000370210 1593 ntAPPRIS ALT2 TSL 2 BASIC17.62■□□□□ 0.41
CXCL5P42830 ATPAF1-202ENST00000371937 1827 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CXCL5P42830 JMJD8-216ENST00000609261 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
CXCL5P42830 SSBP4-206ENST00000599699 793 ntTSL 2 BASIC17.61■□□□□ 0.41
CXCL5P42830 ITGA9-203ENST00000422441 2282 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
CXCL5P42830 AP001107.7-201ENST00000533287 272 ntTSL 2 BASIC17.6■□□□□ 0.41
CXCL5P42830 ANKS1B-202ENST00000333732 1675 ntTSL 2 BASIC17.6■□□□□ 0.41
CXCL5P42830 AC142086.6-201ENST00000621154 1765 ntBASIC17.59■□□□□ 0.41
CXCL5P42830 PLSCR3-209ENST00000574401 2032 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CXCL5P42830 TCEA2-204ENST00000395053 1733 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
CXCL5P42830 CLEC3B-201ENST00000296130 936 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
CXCL5P42830 TM6SF1-202ENST00000322019 2074 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
CXCL5P42830 TSPOAP1-AS1-203ENST00000579527 2042 ntTSL 2 BASIC17.57■□□□□ 0.4
CXCL5P42830 HDAC3-201ENST00000305264 1959 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CXCL5P42830 QKI-207ENST00000453779 5685 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
CXCL5P42830 CADPS-203ENST00000383710 5471 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
CXCL5P42830 COL13A1-203ENST00000398969 2267 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
CXCL5P42830 CCNG2-201ENST00000316355 5526 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CXCL5P42830 GLRX5-201ENST00000331334 1564 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CXCL5P42830 TESK1-201ENST00000336395 2421 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CXCL5P42830 AL031258.1-201ENST00000623562 325 ntBASIC17.56■□□□□ 0.4
CXCL5P42830 ARMC10-205ENST00000428183 2445 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
CXCL5P42830 CERS2-205ENST00000368954 2505 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CXCL5P42830 BMP7-204ENST00000450594 1857 ntTSL 2 BASIC17.55■□□□□ 0.4
CXCL5P42830 SHARPIN-202ENST00000398712 1765 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CXCL5P42830 KCNMA1-283ENST00000640523 5425 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
CXCL5P42830 ARHGAP22-202ENST00000374170 2107 ntTSL 5 BASIC17.54■□□□□ 0.4
CXCL5P42830 FAAH-201ENST00000243167 2094 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CXCL5P42830 PCSK6-216ENST00000615296 2921 ntTSL 5 BASIC17.54■□□□□ 0.4
CXCL5P42830 CGREF1-204ENST00000402550 1575 ntTSL 2 BASIC17.53■□□□□ 0.4
CXCL5P42830 AC113189.4-201ENST00000575331 5553 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
CXCL5P42830 DPF1-202ENST00000412732 2303 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
CXCL5P42830 NREP-202ENST00000379671 2581 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
CXCL5P42830 YAP1-204ENST00000526343 2393 ntTSL 5 BASIC17.52■□□□□ 0.4
CXCL5P42830 ZNF787-203ENST00000610935 1925 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
CXCL5P42830 KCNJ4-201ENST00000303592 2065 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 77.4 ms