Protein–RNA interactions for Protein: O00339

MATN2, Matrilin-2, humanhuman

Predictions only

Length 956 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MATN2O00339 AL391121.1-201ENST00000607967 1349 ntBASIC26.5■■□□□ 1.83
MATN2O00339 TPRA1-202ENST00000355552 1933 ntAPPRIS P1 TSL 1 (best) BASIC26.5■■□□□ 1.83
MATN2O00339 GIPC1-203ENST00000393033 1926 ntAPPRIS P1 TSL 1 (best) BASIC26.5■■□□□ 1.83
MATN2O00339 HOPX-206ENST00000503639 1248 ntAPPRIS P1 TSL 1 (best) BASIC26.5■■□□□ 1.83
MATN2O00339 GXYLT1-201ENST00000280876 1937 ntAPPRIS ALT2 TSL 1 (best) BASIC26.49■■□□□ 1.83
MATN2O00339 TMEM158-201ENST00000503771 1813 ntAPPRIS P1 BASIC26.49■■□□□ 1.83
MATN2O00339 CACNG6-202ENST00000346968 645 ntTSL 5 BASIC26.49■■□□□ 1.83
MATN2O00339 CAHM-201ENST00000604200 896 ntBASIC26.49■■□□□ 1.83
MATN2O00339 CCNYL1-205ENST00000420822 952 ntTSL 1 (best) BASIC26.48■■□□□ 1.83
MATN2O00339 KCTD17-202ENST00000403888 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC26.48■■□□□ 1.83
MATN2O00339 SHF-206ENST00000560471 2499 ntTSL 5 BASIC26.47■■□□□ 1.83
MATN2O00339 PSMG4-205ENST00000419065 629 ntTSL 2 BASIC26.45■■□□□ 1.82
MATN2O00339 CTDNEP1-201ENST00000318988 1549 ntAPPRIS P1 TSL 1 (best) BASIC26.44■■□□□ 1.82
MATN2O00339 LMO1-202ENST00000428101 1038 ntAPPRIS ALT1 TSL 1 (best) BASIC26.44■■□□□ 1.82
MATN2O00339 MBOAT7-203ENST00000391754 1797 ntTSL 1 (best) BASIC26.43■■□□□ 1.82
MATN2O00339 DUSP15-202ENST00000339738 1454 ntAPPRIS P1 TSL 1 (best) BASIC26.43■■□□□ 1.82
MATN2O00339 CUL4A-202ENST00000375440 2364 ntAPPRIS P1 TSL 1 (best) BASIC26.43■■□□□ 1.82
MATN2O00339 AC139426.1-201ENST00000568218 2529 ntBASIC26.42■■□□□ 1.82
MATN2O00339 TPRA1-209ENST00000489960 1903 ntAPPRIS P1 TSL 5 BASIC26.41■■□□□ 1.82
MATN2O00339 AMN-201ENST00000299155 1907 ntAPPRIS P2 TSL 1 (best) BASIC26.4■■□□□ 1.82
MATN2O00339 EBPL-202ENST00000378268 680 ntTSL 3 BASIC26.4■■□□□ 1.82
MATN2O00339 COMMD3-201ENST00000376836 1342 ntAPPRIS P1 TSL 1 (best) BASIC26.39■■□□□ 1.82
MATN2O00339 SH3GL3-202ENST00000427482 1806 ntAPPRIS P1 TSL 1 (best) BASIC26.39■■□□□ 1.82
MATN2O00339 HMX1-201ENST00000400677 1895 ntAPPRIS P1 TSL 1 (best) BASIC26.39■■□□□ 1.82
MATN2O00339 RNF130-201ENST00000261947 1766 ntTSL 1 (best) BASIC26.39■■□□□ 1.82
MATN2O00339 GSC2-201ENST00000086933 1033 ntAPPRIS P1 TSL 5 BASIC26.39■■□□□ 1.82
MATN2O00339 CACNG6-201ENST00000252729 1853 ntAPPRIS P1 TSL 1 (best) BASIC26.38■■□□□ 1.81
MATN2O00339 RCC1L-201ENST00000610322 2300 ntAPPRIS P1 TSL 1 (best) BASIC26.37■■□□□ 1.81
MATN2O00339 AC234582.1-201ENST00000447623 923 ntTSL 5 BASIC26.37■■□□□ 1.81
MATN2O00339 SEC61G-204ENST00000450622 512 ntAPPRIS P1 TSL 2 BASIC26.37■■□□□ 1.81
MATN2O00339 LYNX1-208ENST00000615007 1293 ntAPPRIS P1 TSL 1 (best) BASIC26.37■■□□□ 1.81
MATN2O00339 MLST8-203ENST00000397124 1691 ntAPPRIS P3 TSL 5 BASIC26.37■■□□□ 1.81
MATN2O00339 VWA1-201ENST00000338660 2147 ntTSL 2 BASIC26.36■■□□□ 1.81
MATN2O00339 SIRT3-201ENST00000382743 2543 ntAPPRIS P2 TSL 1 (best) BASIC26.36■■□□□ 1.81
MATN2O00339 ZNF513-201ENST00000323703 2139 ntAPPRIS P1 TSL 1 (best) BASIC26.36■■□□□ 1.81
MATN2O00339 TSPAN33-201ENST00000486685 1863 ntAPPRIS P1 TSL 1 (best) BASIC26.36■■□□□ 1.81
MATN2O00339 PI4KAP1-202ENST00000611748 1906 ntTSL 1 (best) BASIC26.35■■□□□ 1.81
MATN2O00339 SMARCD3-201ENST00000262188 1993 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
MATN2O00339 RHOC-208ENST00000369642 1355 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.81
MATN2O00339 S100A10-202ENST00000368811 1202 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.81
MATN2O00339 HOXD-AS2-202ENST00000440016 999 ntTSL 5 BASIC26.33■■□□□ 1.81
MATN2O00339 WASH5P-204ENST00000632292 975 ntBASIC26.33■■□□□ 1.81
MATN2O00339 FZD2-201ENST00000315323 2112 ntAPPRIS P1 BASIC26.33■■□□□ 1.81
MATN2O00339 EMC10-202ENST00000376918 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC26.32■■□□□ 1.8
MATN2O00339 NMB-201ENST00000360476 1007 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
MATN2O00339 CGGBP1-206ENST00000482016 1147 ntAPPRIS P1 TSL 2 BASIC26.31■■□□□ 1.8
MATN2O00339 ST7-AS1-201ENST00000456775 1889 ntBASIC26.31■■□□□ 1.8
MATN2O00339 WDSUB1-205ENST00000409990 1920 ntAPPRIS P1 TSL 2 BASIC26.31■■□□□ 1.8
MATN2O00339 LDB1-202ENST00000425280 2089 ntTSL 5 BASIC26.3■■□□□ 1.8
MATN2O00339 CCND3-203ENST00000372991 2085 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
MATN2O00339 ARL8A-201ENST00000272217 1793 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
MATN2O00339 CHMP4B-201ENST00000217402 1646 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
MATN2O00339 CAPNS1-201ENST00000246533 1918 ntAPPRIS P2 TSL 1 (best) BASIC26.27■■□□□ 1.8
MATN2O00339 AGFG1-205ENST00000409979 2089 ntAPPRIS ALT1 TSL 5 BASIC26.27■■□□□ 1.8
MATN2O00339 SECTM1-201ENST00000269389 2235 ntAPPRIS P2 TSL 1 (best) BASIC26.27■■□□□ 1.8
MATN2O00339 HOXB3-210ENST00000489475 1845 ntTSL 2 BASIC26.26■■□□□ 1.79
MATN2O00339 PQLC1-203ENST00000397778 2555 ntAPPRIS P3 TSL 1 (best) BASIC26.26■■□□□ 1.79
MATN2O00339 CCDC88C-205ENST00000553403 1651 ntTSL 1 (best) BASIC26.25■■□□□ 1.79
MATN2O00339 CGREF1-202ENST00000312734 1610 ntAPPRIS P2 TSL 5 BASIC26.25■■□□□ 1.79
MATN2O00339 RTN4R-201ENST00000043402 2157 ntAPPRIS P2 TSL 1 (best) BASIC26.24■■□□□ 1.79
MATN2O00339 CHPT1-205ENST00000549872 2001 ntAPPRIS ALT2 TSL 5 BASIC26.24■■□□□ 1.79
MATN2O00339 GALK1-205ENST00000588479 1866 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
MATN2O00339 EXOC3-209ENST00000512944 2825 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
MATN2O00339 GNPTAB-202ENST00000392919 760 ntTSL 1 (best) BASIC26.23■■□□□ 1.79
MATN2O00339 AP006261.1-201ENST00000584783 668 ntBASIC26.23■■□□□ 1.79
MATN2O00339 HNRNPLP2-201ENST00000568980 1570 ntBASIC26.23■■□□□ 1.79
MATN2O00339 CNIH2-203ENST00000528852 1524 ntAPPRIS ALT1 TSL 1 (best) BASIC26.22■■□□□ 1.79
MATN2O00339 INPP5A-202ENST00000368593 1432 ntTSL 1 (best) BASIC26.22■■□□□ 1.79
MATN2O00339 CERS2-205ENST00000368954 2505 ntAPPRIS P1 TSL 1 (best) BASIC26.21■■□□□ 1.79
MATN2O00339 ACTR3B-202ENST00000377776 1566 ntTSL 1 (best) BASIC26.2■■□□□ 1.79
MATN2O00339 GAL3ST1-205ENST00000406361 1819 ntAPPRIS P1 TSL 2 BASIC26.18■■□□□ 1.78
MATN2O00339 MACROD1-201ENST00000255681 1205 ntAPPRIS P1 TSL 1 (best) BASIC26.18■■□□□ 1.78
MATN2O00339 DENR-202ENST00000455982 1052 ntTSL 5 BASIC26.18■■□□□ 1.78
MATN2O00339 FEV-201ENST00000295727 1879 ntAPPRIS P1 TSL 1 (best) BASIC26.16■■□□□ 1.78
MATN2O00339 HDAC3-201ENST00000305264 1959 ntAPPRIS P1 TSL 1 (best) BASIC26.16■■□□□ 1.78
MATN2O00339 NEUROG2-201ENST00000313341 2287 ntAPPRIS P1 TSL 1 (best) BASIC26.16■■□□□ 1.78
MATN2O00339 ITGA9-203ENST00000422441 2282 ntTSL 1 (best) BASIC26.15■■□□□ 1.78
MATN2O00339 H2AFV-205ENST00000381124 628 ntTSL 3 BASIC26.15■■□□□ 1.78
MATN2O00339 MSX1-201ENST00000382723 1939 ntAPPRIS P1 TSL 1 (best) BASIC26.15■■□□□ 1.78
MATN2O00339 RNF150-204ENST00000507500 1530 ntTSL 1 (best) BASIC26.14■■□□□ 1.78
MATN2O00339 PGM5-201ENST00000396392 1782 ntTSL 1 (best) BASIC26.13■■□□□ 1.77
MATN2O00339 PDPK1-203ENST00000389224 2416 ntTSL 2 BASIC26.13■■□□□ 1.77
MATN2O00339 ZIC2-201ENST00000376335 2983 ntAPPRIS P1 TSL 1 (best) BASIC26.13■■□□□ 1.77
MATN2O00339 CHML-205ENST00000638160 705 ntTSL 3 BASIC26.13■■□□□ 1.77
MATN2O00339 LRRC61-202ENST00000359623 1877 ntAPPRIS P1 TSL 2 BASIC26.13■■□□□ 1.77
MATN2O00339 SSU72-201ENST00000291386 1290 ntAPPRIS P1 TSL 1 (best) BASIC26.12■■□□□ 1.77
MATN2O00339 TPGS1-201ENST00000359315 1114 ntAPPRIS P1 TSL 1 (best) BASIC26.12■■□□□ 1.77
MATN2O00339 PARD6A-202ENST00000458121 1260 ntAPPRIS ALT1 TSL 1 (best) BASIC26.12■■□□□ 1.77
MATN2O00339 TM6SF1-202ENST00000322019 2074 ntAPPRIS P1 TSL 1 (best) BASIC26.11■■□□□ 1.77
MATN2O00339 HNRNPAB-206ENST00000506339 1747 ntAPPRIS ALT2 TSL 5 BASIC26.11■■□□□ 1.77
MATN2O00339 ARPC5L-202ENST00000353214 2507 ntAPPRIS P1 TSL 2 BASIC26.11■■□□□ 1.77
MATN2O00339 ARHGAP22-202ENST00000374170 2107 ntTSL 5 BASIC26.1■■□□□ 1.77
MATN2O00339 FAM185A-202ENST00000413034 1179 ntAPPRIS P4 TSL 5 BASIC26.1■■□□□ 1.77
MATN2O00339 EFNA3-201ENST00000368408 1782 ntAPPRIS P1 TSL 1 (best) BASIC26.1■■□□□ 1.77
MATN2O00339 SLC52A2-201ENST00000329994 1896 ntAPPRIS P1 TSL 1 (best) BASIC26.09■■□□□ 1.77
MATN2O00339 SP8-201ENST00000361443 1714 ntAPPRIS P3 TSL 1 (best) BASIC26.09■■□□□ 1.77
MATN2O00339 MIR762-201ENST00000390236 83 ntBASIC26.09■■□□□ 1.77
MATN2O00339 MIR3665-201ENST00000578708 105 ntBASIC26.09■■□□□ 1.77
MATN2O00339 FOXQ1-201ENST00000296839 2309 ntAPPRIS P1 BASIC26.09■■□□□ 1.77
MATN2O00339 RAB26-201ENST00000210187 1675 ntAPPRIS P1 TSL 1 (best) BASIC26.09■■□□□ 1.77
Retrieved 100 of 98,524 protein–RNA pairs in 30.5 ms