Protein–RNA interactions for Protein: A1A4V9

CCDC189, Coiled-coil domain-containing protein 189, humanhuman

Predictions only

Length 331 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC189A1A4V9 ANKRD13D-211ENST00000511455 2139 ntAPPRIS P1 TSL 1 (best) BASIC26.42■■□□□ 1.82
CCDC189A1A4V9 ABHD12-201ENST00000339157 2117 ntAPPRIS P1 TSL 2 BASIC26.42■■□□□ 1.82
CCDC189A1A4V9 PI4KAP1-202ENST00000611748 1906 ntTSL 1 (best) BASIC26.41■■□□□ 1.82
CCDC189A1A4V9 PHOX2A-201ENST00000298231 1699 ntAPPRIS P1 TSL 1 (best) BASIC26.41■■□□□ 1.82
CCDC189A1A4V9 NRGN-202ENST00000412681 1106 ntAPPRIS P1 TSL 1 (best) BASIC26.4■■□□□ 1.82
CCDC189A1A4V9 LINC01089-207ENST00000538335 630 ntTSL 3 BASIC26.4■■□□□ 1.82
CCDC189A1A4V9 AC025431.1-201ENST00000559684 874 ntTSL 3 BASIC26.4■■□□□ 1.82
CCDC189A1A4V9 KCNQ5-204ENST00000370392 1469 ntTSL 1 (best) BASIC26.39■■□□□ 1.82
CCDC189A1A4V9 GXYLT1-201ENST00000280876 1937 ntAPPRIS ALT2 TSL 1 (best) BASIC26.39■■□□□ 1.81
CCDC189A1A4V9 RCC1L-202ENST00000614461 2419 ntTSL 1 (best) BASIC26.38■■□□□ 1.81
CCDC189A1A4V9 CDKN2D-202ENST00000393599 1422 ntAPPRIS P1 TSL 1 (best) BASIC26.38■■□□□ 1.81
CCDC189A1A4V9 AGAP1-202ENST00000336665 5427 ntAPPRIS P3 TSL 1 (best) BASIC26.38■■□□□ 1.81
CCDC189A1A4V9 TSPAN11-203ENST00000545802 1649 ntTSL 1 (best) BASIC26.37■■□□□ 1.81
CCDC189A1A4V9 TESK1-206ENST00000620767 2438 ntAPPRIS P1 TSL 5 BASIC26.37■■□□□ 1.81
CCDC189A1A4V9 UCK1-201ENST00000372208 2063 ntTSL 1 (best) BASIC26.37■■□□□ 1.81
CCDC189A1A4V9 CCZ1B-215ENST00000626257 2211 ntTSL 2 BASIC26.37■■□□□ 1.81
CCDC189A1A4V9 CDK2AP1-203ENST00000535979 1281 ntTSL 3 BASIC26.36■■□□□ 1.81
CCDC189A1A4V9 KLF16-203ENST00000592313 508 ntTSL 3 BASIC26.36■■□□□ 1.81
CCDC189A1A4V9 FAAP20-204ENST00000400919 1413 ntTSL 3 BASIC26.36■■□□□ 1.81
CCDC189A1A4V9 CSNK1E-203ENST00000396832 2791 ntAPPRIS P1 TSL 1 (best) BASIC26.35■■□□□ 1.81
CCDC189A1A4V9 COL13A1-203ENST00000398969 2267 ntAPPRIS ALT2 TSL 5 BASIC26.35■■□□□ 1.81
CCDC189A1A4V9 HDAC3-201ENST00000305264 1959 ntAPPRIS P1 TSL 1 (best) BASIC26.35■■□□□ 1.81
CCDC189A1A4V9 SH3GL3-202ENST00000427482 1806 ntAPPRIS P1 TSL 1 (best) BASIC26.35■■□□□ 1.81
CCDC189A1A4V9 CUEDC1-201ENST00000360238 2193 ntAPPRIS P1 TSL 2 BASIC26.34■■□□□ 1.81
CCDC189A1A4V9 ABCB10P3-201ENST00000561950 2166 ntBASIC26.33■■□□□ 1.81
CCDC189A1A4V9 HES7-202ENST00000541682 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC26.33■■□□□ 1.81
CCDC189A1A4V9 COL13A1-210ENST00000517713 2007 ntAPPRIS ALT2 TSL 5 BASIC26.32■■□□□ 1.8
CCDC189A1A4V9 TSPAN33-201ENST00000486685 1863 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
CCDC189A1A4V9 KCTD17-202ENST00000403888 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC26.32■■□□□ 1.8
CCDC189A1A4V9 FGFRL1-205ENST00000510644 2304 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
CCDC189A1A4V9 MSX1-201ENST00000382723 1939 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
CCDC189A1A4V9 BIN1-204ENST00000348750 2074 ntTSL 1 (best) BASIC26.3■■□□□ 1.8
CCDC189A1A4V9 TP53I13-201ENST00000301057 1530 ntAPPRIS P2 TSL 1 (best) BASIC26.3■■□□□ 1.8
CCDC189A1A4V9 NGB-201ENST00000298352 1884 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
CCDC189A1A4V9 RTN2-201ENST00000245923 2293 ntTSL 1 (best) BASIC26.3■■□□□ 1.8
CCDC189A1A4V9 DCBLD1-201ENST00000296955 1979 ntAPPRIS P2 TSL 1 (best) BASIC26.3■■□□□ 1.8
CCDC189A1A4V9 CGREF1-203ENST00000402394 1906 ntAPPRIS P2 TSL 2 BASIC26.29■■□□□ 1.8
CCDC189A1A4V9 KIAA1456-206ENST00000528753 2392 ntTSL 2 BASIC26.29■■□□□ 1.8
CCDC189A1A4V9 SKOR2-203ENST00000620245 3048 ntAPPRIS ALT2 TSL 5 BASIC26.29■■□□□ 1.8
CCDC189A1A4V9 AVEN-201ENST00000306730 1605 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
CCDC189A1A4V9 WASH5P-204ENST00000632292 975 ntBASIC26.28■■□□□ 1.8
CCDC189A1A4V9 PGM5-201ENST00000396392 1782 ntTSL 1 (best) BASIC26.28■■□□□ 1.8
CCDC189A1A4V9 AC079305.1-201ENST00000428541 499 ntTSL 3 BASIC26.27■■□□□ 1.8
CCDC189A1A4V9 ARL8A-201ENST00000272217 1793 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
CCDC189A1A4V9 RNF150-204ENST00000507500 1530 ntTSL 1 (best) BASIC26.26■■□□□ 1.79
CCDC189A1A4V9 AL133380.1-201ENST00000506013 324 ntBASIC26.26■■□□□ 1.79
CCDC189A1A4V9 RAB26-201ENST00000210187 1675 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
CCDC189A1A4V9 ZNF276-202ENST00000443381 2267 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
CCDC189A1A4V9 KCNQ3-202ENST00000519445 2801 ntAPPRIS ALT2 TSL 5 BASIC26.24■■□□□ 1.79
CCDC189A1A4V9 ST7-AS1-201ENST00000456775 1889 ntBASIC26.23■■□□□ 1.79
CCDC189A1A4V9 ZNF513-201ENST00000323703 2139 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
CCDC189A1A4V9 AMN-201ENST00000299155 1907 ntAPPRIS P2 TSL 1 (best) BASIC26.23■■□□□ 1.79
CCDC189A1A4V9 JMJD8-216ENST00000609261 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC26.22■■□□□ 1.79
CCDC189A1A4V9 CHPT1-205ENST00000549872 2001 ntAPPRIS ALT2 TSL 5 BASIC26.22■■□□□ 1.79
CCDC189A1A4V9 TCFL5-201ENST00000217162 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC26.22■■□□□ 1.79
CCDC189A1A4V9 TCFL5-202ENST00000335351 2456 ntAPPRIS P2 TSL 1 (best) BASIC26.22■■□□□ 1.79
CCDC189A1A4V9 LDB1-202ENST00000425280 2089 ntTSL 5 BASIC26.21■■□□□ 1.79
CCDC189A1A4V9 POU3F3-201ENST00000361360 3064 ntAPPRIS P1 BASIC26.21■■□□□ 1.79
CCDC189A1A4V9 GIPC1-203ENST00000393033 1926 ntAPPRIS P1 TSL 1 (best) BASIC26.21■■□□□ 1.79
CCDC189A1A4V9 CCDC88C-205ENST00000553403 1651 ntTSL 1 (best) BASIC26.2■■□□□ 1.78
CCDC189A1A4V9 FAM89B-201ENST00000316409 1409 ntTSL 1 (best) BASIC26.2■■□□□ 1.78
CCDC189A1A4V9 TCEA2-204ENST00000395053 1733 ntTSL 1 (best) BASIC26.19■■□□□ 1.78
CCDC189A1A4V9 SIRT3-201ENST00000382743 2543 ntAPPRIS P2 TSL 1 (best) BASIC26.19■■□□□ 1.78
CCDC189A1A4V9 CUL4A-202ENST00000375440 2364 ntAPPRIS P1 TSL 1 (best) BASIC26.19■■□□□ 1.78
CCDC189A1A4V9 GLRX5-201ENST00000331334 1564 ntAPPRIS P1 TSL 1 (best) BASIC26.18■■□□□ 1.78
CCDC189A1A4V9 SIGMAR1-205ENST00000477726 840 ntTSL 1 (best) BASIC26.18■■□□□ 1.78
CCDC189A1A4V9 CGREF1-204ENST00000402550 1575 ntTSL 2 BASIC26.16■■□□□ 1.78
CCDC189A1A4V9 BCL11B-203ENST00000443726 2599 ntAPPRIS ALT2 TSL 5 BASIC26.16■■□□□ 1.78
CCDC189A1A4V9 AL135925.1-201ENST00000605920 1701 ntBASIC26.16■■□□□ 1.78
CCDC189A1A4V9 CCND3-202ENST00000372988 2133 ntTSL 1 (best) BASIC26.15■■□□□ 1.78
CCDC189A1A4V9 MXD3-203ENST00000439742 1483 ntAPPRIS P1 TSL 1 (best) BASIC26.15■■□□□ 1.78
CCDC189A1A4V9 SLC9A3R2-202ENST00000432365 1564 ntTSL 1 (best) BASIC26.14■■□□□ 1.78
CCDC189A1A4V9 THAP4-204ENST00000407315 2367 ntAPPRIS P1 TSL 1 (best) BASIC26.14■■□□□ 1.77
CCDC189A1A4V9 LMO2-201ENST00000257818 2294 ntTSL 1 (best) BASIC26.13■■□□□ 1.77
CCDC189A1A4V9 ADNP-AS1-201ENST00000558899 927 ntTSL 3 BASIC26.13■■□□□ 1.77
CCDC189A1A4V9 GAL3ST1-205ENST00000406361 1819 ntAPPRIS P1 TSL 2 BASIC26.12■■□□□ 1.77
CCDC189A1A4V9 SLC52A2-201ENST00000329994 1896 ntAPPRIS P1 TSL 1 (best) BASIC26.12■■□□□ 1.77
CCDC189A1A4V9 NPTXR-202ENST00000640136 1503 ntAPPRIS P2 TSL 1 (best) BASIC26.12■■□□□ 1.77
CCDC189A1A4V9 ESRRA-203ENST00000406310 2218 ntAPPRIS ALT1 TSL 1 (best) BASIC26.11■■□□□ 1.77
CCDC189A1A4V9 TPRA1-202ENST00000355552 1933 ntAPPRIS P1 TSL 1 (best) BASIC26.11■■□□□ 1.77
CCDC189A1A4V9 SHOX2-204ENST00000483851 1866 ntAPPRIS ALT2 TSL 2 BASIC26.09■■□□□ 1.77
CCDC189A1A4V9 ATPAF1-201ENST00000329231 1241 ntTSL 2 BASIC26.09■■□□□ 1.77
CCDC189A1A4V9 C1orf122-204ENST00000468084 1234 ntAPPRIS ALT2 TSL 2 BASIC26.09■■□□□ 1.77
CCDC189A1A4V9 HAUS7-201ENST00000370210 1593 ntAPPRIS ALT2 TSL 2 BASIC26.08■■□□□ 1.77
CCDC189A1A4V9 HNRNPAB-202ENST00000358344 1796 ntAPPRIS P4 TSL 1 (best) BASIC26.08■■□□□ 1.77
CCDC189A1A4V9 AC009133.5-201ENST00000562594 473 ntTSL 4 BASIC26.08■■□□□ 1.77
CCDC189A1A4V9 EMC10-202ENST00000376918 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC26.08■■□□□ 1.77
CCDC189A1A4V9 GUSB-202ENST00000421103 1742 ntTSL 2 BASIC26.08■■□□□ 1.76
CCDC189A1A4V9 TPRA1-209ENST00000489960 1903 ntAPPRIS P1 TSL 5 BASIC26.08■■□□□ 1.76
CCDC189A1A4V9 RUNDC3A-206ENST00000590941 1675 ntTSL 1 (best) BASIC26.06■■□□□ 1.76
CCDC189A1A4V9 TM6SF1-202ENST00000322019 2074 ntAPPRIS P1 TSL 1 (best) BASIC26.06■■□□□ 1.76
CCDC189A1A4V9 VWA1-201ENST00000338660 2147 ntTSL 2 BASIC26.06■■□□□ 1.76
CCDC189A1A4V9 C11orf80-204ENST00000525908 2135 ntAPPRIS P3 TSL 2 BASIC26.05■■□□□ 1.76
CCDC189A1A4V9 EFNA3-201ENST00000368408 1782 ntAPPRIS P1 TSL 1 (best) BASIC26.05■■□□□ 1.76
CCDC189A1A4V9 PCYT2-206ENST00000571105 1628 ntTSL 5 BASIC26.03■■□□□ 1.76
CCDC189A1A4V9 AGFG1-205ENST00000409979 2089 ntAPPRIS ALT1 TSL 5 BASIC26.03■■□□□ 1.76
CCDC189A1A4V9 MNX1-201ENST00000252971 2174 ntAPPRIS P3 TSL 1 (best) BASIC26.03■■□□□ 1.76
CCDC189A1A4V9 HOXB3-212ENST00000498678 2196 ntAPPRIS P1 TSL 2 BASIC26.03■■□□□ 1.76
CCDC189A1A4V9 AGPAT2-202ENST00000371696 1512 ntAPPRIS P1 TSL 1 (best) BASIC26.03■■□□□ 1.76
CCDC189A1A4V9 PQLC1-203ENST00000397778 2555 ntAPPRIS P3 TSL 1 (best) BASIC26.02■■□□□ 1.76
Retrieved 100 of 98,524 protein–RNA pairs in 41.2 ms