Protein–RNA interactions for Protein: A0A0B4J241

TRAV13-1, T-cell receptor alpha variable 13-1 (Fragment), humanhuman

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV13-1A0A0B4J241 DSG2-201ENST00000261590 5831 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
TRAV13-1A0A0B4J241 DBP-205ENST00000601104 1489 ntTSL 1 (best) BASIC18.39■□□□□ 0.54
TRAV13-1A0A0B4J241 AC243773.2-204ENST00000621428 1462 ntTSL 1 (best) BASIC18.39■□□□□ 0.54
TRAV13-1A0A0B4J241 PDPK1-203ENST00000389224 2416 ntTSL 2 BASIC18.39■□□□□ 0.53
TRAV13-1A0A0B4J241 ST7-AS1-201ENST00000456775 1889 ntBASIC18.39■□□□□ 0.53
TRAV13-1A0A0B4J241 CERS2-205ENST00000368954 2505 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
TRAV13-1A0A0B4J241 DYNLL1-207ENST00000549989 719 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
TRAV13-1A0A0B4J241 DYNLL1-208ENST00000550178 581 ntBASIC18.38■□□□□ 0.53
TRAV13-1A0A0B4J241 MSX1-201ENST00000382723 1939 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
TRAV13-1A0A0B4J241 RSG1-201ENST00000375599 1545 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
TRAV13-1A0A0B4J241 CACNG6-201ENST00000252729 1853 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
TRAV13-1A0A0B4J241 WDSUB1-205ENST00000409990 1920 ntAPPRIS P1 TSL 2 BASIC18.37■□□□□ 0.53
TRAV13-1A0A0B4J241 AGFG1-205ENST00000409979 2089 ntAPPRIS ALT1 TSL 5 BASIC18.37■□□□□ 0.53
TRAV13-1A0A0B4J241 NKX1-1-201ENST00000422806 1236 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
TRAV13-1A0A0B4J241 RTN4R-201ENST00000043402 2157 ntAPPRIS P2 TSL 1 (best) BASIC18.37■□□□□ 0.53
TRAV13-1A0A0B4J241 LMTK3-201ENST00000270238 4972 ntAPPRIS P2 TSL 1 (best) BASIC18.36■□□□□ 0.53
TRAV13-1A0A0B4J241 ARL8A-201ENST00000272217 1793 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
TRAV13-1A0A0B4J241 CCDC88C-205ENST00000553403 1651 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
TRAV13-1A0A0B4J241 PGM5-201ENST00000396392 1782 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
TRAV13-1A0A0B4J241 TM6SF1-202ENST00000322019 2074 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
TRAV13-1A0A0B4J241 CAPNS1-201ENST00000246533 1918 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
TRAV13-1A0A0B4J241 CGREF1-202ENST00000312734 1610 ntAPPRIS P2 TSL 5 BASIC18.34■□□□□ 0.53
TRAV13-1A0A0B4J241 PPP1R26-201ENST00000356818 4932 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
TRAV13-1A0A0B4J241 EBPL-203ENST00000378270 579 ntTSL 2 BASIC18.34■□□□□ 0.53
TRAV13-1A0A0B4J241 MAGI2-217ENST00000629359 6704 ntTSL 5 BASIC18.34■□□□□ 0.53
TRAV13-1A0A0B4J241 CCND3-203ENST00000372991 2085 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
TRAV13-1A0A0B4J241 SAP30-201ENST00000296504 1108 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
TRAV13-1A0A0B4J241 LRRC61-202ENST00000359623 1877 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
TRAV13-1A0A0B4J241 ARPC5L-202ENST00000353214 2507 ntAPPRIS P1 TSL 2 BASIC18.3■□□□□ 0.52
TRAV13-1A0A0B4J241 GAL3ST1-205ENST00000406361 1819 ntAPPRIS P1 TSL 2 BASIC18.3■□□□□ 0.52
TRAV13-1A0A0B4J241 ITGA9-203ENST00000422441 2282 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
TRAV13-1A0A0B4J241 SIGMAR1-203ENST00000378892 1743 ntTSL 2 BASIC18.3■□□□□ 0.52
TRAV13-1A0A0B4J241 RAB26-201ENST00000210187 1675 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
TRAV13-1A0A0B4J241 RAB40C-201ENST00000248139 2699 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
TRAV13-1A0A0B4J241 SLC22A23-201ENST00000380298 1574 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
TRAV13-1A0A0B4J241 NEUROG2-201ENST00000313341 2287 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
TRAV13-1A0A0B4J241 ACTR3B-202ENST00000377776 1566 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
TRAV13-1A0A0B4J241 AP001107.7-201ENST00000533287 272 ntTSL 2 BASIC18.28■□□□□ 0.52
TRAV13-1A0A0B4J241 SP8-201ENST00000361443 1714 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.52
TRAV13-1A0A0B4J241 SLCO3A1-201ENST00000318445 5115 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
TRAV13-1A0A0B4J241 AFDN-201ENST00000344191 5249 ntTSL 5 BASIC18.27■□□□□ 0.51
TRAV13-1A0A0B4J241 YAP1-204ENST00000526343 2393 ntTSL 5 BASIC18.26■□□□□ 0.51
TRAV13-1A0A0B4J241 RASSF8-202ENST00000381352 2320 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
TRAV13-1A0A0B4J241 SLC52A2-201ENST00000329994 1896 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
TRAV13-1A0A0B4J241 FOXE3-201ENST00000335071 1981 ntAPPRIS P1 BASIC18.26■□□□□ 0.51
TRAV13-1A0A0B4J241 FOXQ1-201ENST00000296839 2309 ntAPPRIS P1 BASIC18.26■□□□□ 0.51
TRAV13-1A0A0B4J241 TBL1X-201ENST00000217964 5871 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
TRAV13-1A0A0B4J241 HES7-202ENST00000541682 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC18.25■□□□□ 0.51
TRAV13-1A0A0B4J241 HMGB1-205ENST00000399494 1282 ntAPPRIS P1 TSL 2 BASIC18.25■□□□□ 0.51
TRAV13-1A0A0B4J241 SSBP4-206ENST00000599699 793 ntTSL 2 BASIC18.25■□□□□ 0.51
TRAV13-1A0A0B4J241 HNRNPAB-206ENST00000506339 1747 ntAPPRIS ALT2 TSL 5 BASIC18.25■□□□□ 0.51
TRAV13-1A0A0B4J241 MAP3K5-201ENST00000359015 5197 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
TRAV13-1A0A0B4J241 ARHGAP22-202ENST00000374170 2107 ntTSL 5 BASIC18.25■□□□□ 0.51
TRAV13-1A0A0B4J241 CHMP4B-201ENST00000217402 1646 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
TRAV13-1A0A0B4J241 ANKS1B-202ENST00000333732 1675 ntTSL 2 BASIC18.24■□□□□ 0.51
TRAV13-1A0A0B4J241 COL13A1-203ENST00000398969 2267 ntAPPRIS ALT2 TSL 5 BASIC18.23■□□□□ 0.51
TRAV13-1A0A0B4J241 AL031258.1-201ENST00000623562 325 ntBASIC18.23■□□□□ 0.51
TRAV13-1A0A0B4J241 SSBP4-202ENST00000348495 1721 ntAPPRIS ALT1 TSL 2 BASIC18.23■□□□□ 0.51
TRAV13-1A0A0B4J241 FEV-201ENST00000295727 1879 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
TRAV13-1A0A0B4J241 RUNDC3A-206ENST00000590941 1675 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
TRAV13-1A0A0B4J241 GABRA5-203ENST00000400081 2761 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
TRAV13-1A0A0B4J241 TCEA2-204ENST00000395053 1733 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
TRAV13-1A0A0B4J241 AL135925.1-201ENST00000605920 1701 ntBASIC18.2■□□□□ 0.5
TRAV13-1A0A0B4J241 FAM117A-201ENST00000240364 2365 ntAPPRIS P2 TSL 1 (best) BASIC18.2■□□□□ 0.5
TRAV13-1A0A0B4J241 ABHD17A-201ENST00000250974 1630 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
TRAV13-1A0A0B4J241 TSPAN11-203ENST00000545802 1649 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
TRAV13-1A0A0B4J241 KCNC3-201ENST00000376959 5447 ntAPPRIS ALT2 TSL 5 BASIC18.2■□□□□ 0.5
TRAV13-1A0A0B4J241 CATIP-201ENST00000289388 1323 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
TRAV13-1A0A0B4J241 EFNA3-201ENST00000368408 1782 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
TRAV13-1A0A0B4J241 FAAH-201ENST00000243167 2094 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
TRAV13-1A0A0B4J241 PGM5P2-201ENST00000613141 1980 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
TRAV13-1A0A0B4J241 PTPRM-201ENST00000332175 6095 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
TRAV13-1A0A0B4J241 COL13A1-213ENST00000520267 2276 ntAPPRIS ALT2 TSL 5 BASIC18.19■□□□□ 0.5
TRAV13-1A0A0B4J241 ADAP1-201ENST00000265846 2363 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
TRAV13-1A0A0B4J241 SLC30A10-202ENST00000366926 1915 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
TRAV13-1A0A0B4J241 CLEC3B-201ENST00000296130 936 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
TRAV13-1A0A0B4J241 PQLC1-211ENST00000590381 1247 ntTSL 2 BASIC18.18■□□□□ 0.5
TRAV13-1A0A0B4J241 C11orf95-202ENST00000433688 5716 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
TRAV13-1A0A0B4J241 DPF1-202ENST00000412732 2303 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
TRAV13-1A0A0B4J241 HOOK2-201ENST00000264827 2603 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
TRAV13-1A0A0B4J241 TMEM9-201ENST00000367330 1959 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
TRAV13-1A0A0B4J241 PURG-201ENST00000339382 2693 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
TRAV13-1A0A0B4J241 MAGI2-201ENST00000354212 6880 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
TRAV13-1A0A0B4J241 HOXB3-201ENST00000311626 2642 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
TRAV13-1A0A0B4J241 HNRNPAB-202ENST00000358344 1796 ntAPPRIS P4 TSL 1 (best) BASIC18.16■□□□□ 0.5
TRAV13-1A0A0B4J241 AC113189.4-201ENST00000575331 5553 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
TRAV13-1A0A0B4J241 CADPS-215ENST00000490353 2669 ntTSL 5 BASIC18.16■□□□□ 0.5
TRAV13-1A0A0B4J241 HDAC3-201ENST00000305264 1959 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
TRAV13-1A0A0B4J241 FOXP4-203ENST00000373060 5948 ntTSL 5 BASIC18.15■□□□□ 0.5
TRAV13-1A0A0B4J241 FOXP4-204ENST00000373063 5910 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
TRAV13-1A0A0B4J241 KCNQ5-204ENST00000370392 1469 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
TRAV13-1A0A0B4J241 AVEN-201ENST00000306730 1605 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
TRAV13-1A0A0B4J241 SENP3-201ENST00000321337 2611 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
TRAV13-1A0A0B4J241 ACTR3B-201ENST00000256001 2216 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
TRAV13-1A0A0B4J241 JMJD8-216ENST00000609261 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
TRAV13-1A0A0B4J241 TESK1-201ENST00000336395 2421 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
TRAV13-1A0A0B4J241 THAP11-201ENST00000303596 2114 ntAPPRIS P1 BASIC18.14■□□□□ 0.49
TRAV13-1A0A0B4J241 GKAP1-203ENST00000376371 1778 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
TRAV13-1A0A0B4J241 IL17D-201ENST00000304920 1861 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
TRAV13-1A0A0B4J241 TSPOAP1-AS1-203ENST00000579527 2042 ntTSL 2 BASIC18.13■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 43.7 ms