RNA–Protein interactions for RNA: ENST00000373063.7

FOXP4-204, Transcript of forkhead box P4, humanhuman

TSL 1 (best) BASIC

Gene FOXP4, Length 5,910 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXP4-204ENST00000373063 DCAF8L2P0C7V8 631 aa40.07■■■■■ 4
FOXP4-204ENST00000373063 SUPT5HO00267 1087 aaKnown RBP37.25■■■■□ 3.55
FOXP4-204ENST00000373063 NISCHQ9Y2I1 1504 aa37.24■■■■□ 3.55
FOXP4-204ENST00000373063 SHROOM4Q9ULL8 1493 aa36.75■■■■□ 3.47
FOXP4-204ENST00000373063 EHMT2Q96KQ7 1210 aa36.42■■■■□ 3.42
FOXP4-204ENST00000373063 APLP2Q06481 763 aa35.78■■■■□ 3.32
FOXP4-204ENST00000373063 FAM9AQ8IZU1 332 aaPredicted RBP35.76■■■■□ 3.32
FOXP4-204ENST00000373063 TTBK1Q5TCY1 1321 aaPredicted RBP35.08■■■■□ 3.21
FOXP4-204ENST00000373063 RANGAP1P46060 587 aaPredicted RBP35.04■■■■□ 3.2
FOXP4-204ENST00000373063 PELP1Q8IZL8 1130 aaKnown RBP34.88■■■■□ 3.17
FOXP4-204ENST00000373063 ATP1B4Q9UN42 357 aaPredicted RBP34.88■■■■□ 3.17
FOXP4-204ENST00000373063 TRIM41Q8WV44 630 aa34.52■■■■□ 3.12
FOXP4-204ENST00000373063 UBTFP17480 764 aaKnown RBP34.34■■■■□ 3.09
FOXP4-204ENST00000373063 PCGF6Q9BYE7 350 aa34.31■■■■□ 3.08
FOXP4-204ENST00000373063 CCER1Q8TC90 406 aaPredicted RBP33.94■■■■□ 3.02
FOXP4-204ENST00000373063 MYT1LQ9UL68 1186 aa33.92■■■■□ 3.02
FOXP4-204ENST00000373063 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP33.77■■■■□ 3
FOXP4-204ENST00000373063 HNRNPUL2Q1KMD3 747 aaKnown RBP33.77■■■■□ 3
FOXP4-204ENST00000373063 ZEB1P37275 1124 aaPredicted RBP33.58■■■□□ 2.97
FOXP4-204ENST00000373063 ERICH6Q7L0X2 663 aa33.52■■■□□ 2.96
FOXP4-204ENST00000373063 CENPBP07199 599 aaPredicted RBP33.47■■■□□ 2.95
FOXP4-204ENST00000373063 PPARGC1BQ86YN6 1023 aaKnown RBP33.43■■■□□ 2.94
FOXP4-204ENST00000373063 ITGAEP38570 1179 aa33.29■■■□□ 2.92
FOXP4-204ENST00000373063 CHIC1Q5VXU3 224 aa33.26■■■□□ 2.92
FOXP4-204ENST00000373063 NEFLP07196 543 aa33.19■■■□□ 2.9
FOXP4-204ENST00000373063 POLR3GLQ9BT43 218 aa33.17■■■□□ 2.9
FOXP4-204ENST00000373063 YTHDC1Q96MU7 727 aaKnown RBP33.07■■■□□ 2.88
FOXP4-204ENST00000373063 ABCC9O60706 1549 aa33.05■■■□□ 2.88
FOXP4-204ENST00000373063 PABPN1Q86U42 306 aaKnown RBP eCLIP33.03■■■□□ 2.88
FOXP4-204ENST00000373063 SLC4A1APQ9BWU0 796 aaKnown RBP32.85■■■□□ 2.85
FOXP4-204ENST00000373063 CNGB1Q14028 1251 aaPredicted RBP32.74■■■□□ 2.83
FOXP4-204ENST00000373063 TRIM26Q12899 539 aaPredicted RBP32.67■■■□□ 2.82
FOXP4-204ENST00000373063 FBLN2P98095 1184 aa32.59■■■□□ 2.81
FOXP4-204ENST00000373063 LOC105371045A0A1W2PR82 267 aa32.53■■■□□ 2.8
FOXP4-204ENST00000373063 FAM50AQ14320 339 aaKnown RBP32.48■■■□□ 2.79
FOXP4-204ENST00000373063 DAXXQ9UER7 740 aaPredicted RBP32.4■■■□□ 2.78
FOXP4-204ENST00000373063 TRIM52Q96A61 297 aa32.38■■■□□ 2.77
FOXP4-204ENST00000373063 BCANQ96GW7 911 aa32.06■■■□□ 2.72
FOXP4-204ENST00000373063 ZNF326Q5BKZ1 582 aaKnown RBP31.99■■■□□ 2.71
FOXP4-204ENST00000373063 HRCP23327 699 aa31.99■■■□□ 2.71
FOXP4-204ENST00000373063 NEUROD1Q13562 356 aa31.98■■■□□ 2.71
FOXP4-204ENST00000373063 ARID3CA6NKF2 412 aa31.95■■■□□ 2.71
FOXP4-204ENST00000373063 CLSPNQ9HAW4 1339 aa31.9■■■□□ 2.7
FOXP4-204ENST00000373063 P3H3Q8IVL6 736 aa31.83■■■□□ 2.69
FOXP4-204ENST00000373063 SLC24A1O60721 1099 aa31.79■■■□□ 2.68
FOXP4-204ENST00000373063 ESF1Q9H501 851 aaKnown RBP31.74■■■□□ 2.67
FOXP4-204ENST00000373063 ZNF777Q9ULD5 760 aaPredicted RBP31.72■■■□□ 2.67
FOXP4-204ENST00000373063 PLPPR3Q6T4P5 718 aa31.63■■■□□ 2.65
FOXP4-204ENST00000373063 ZNF316A6NFI3 1004 aaPredicted RBP31.62■■■□□ 2.65
FOXP4-204ENST00000373063 ZBTB47Q9UFB7 747 aaPredicted RBP31.56■■■□□ 2.64
FOXP4-204ENST00000373063 NPM1P06748 294 aaKnown RBP eCLIP31.56■■■□□ 2.64
FOXP4-204ENST00000373063 CDK11AQ9UQ88 783 aaPredicted RBP31.53■■■□□ 2.64
FOXP4-204ENST00000373063 NEFMP07197 916 aa31.5■■■□□ 2.63
FOXP4-204ENST00000373063 DIEXFQ68CQ4 756 aaKnown RBP31.47■■■□□ 2.63
FOXP4-204ENST00000373063 STAG3Q9UJ98 1225 aa31.46■■■□□ 2.63
FOXP4-204ENST00000373063 SCRIBQ14160 1630 aa31.45■■■□□ 2.63
FOXP4-204ENST00000373063 MYT1Q01538 1121 aa31.42■■■□□ 2.62
FOXP4-204ENST00000373063 ANP32CO43423 234 aa31.4■■■□□ 2.62
FOXP4-204ENST00000373063 BCL11AQ9H165 835 aa31.37■■■□□ 2.61
FOXP4-204ENST00000373063 CHGAP10645 457 aaKnown RBP31.37■■■□□ 2.61
FOXP4-204ENST00000373063 CANXP27824 592 aaKnown RBP31.35■■■□□ 2.61
FOXP4-204ENST00000373063 CSRNP3Q8WYN3 585 aa31.34■■■□□ 2.61
FOXP4-204ENST00000373063 RTL5Q5HYW3 569 aaPredicted RBP31.19■■■□□ 2.58
FOXP4-204ENST00000373063 CHMP7Q8WUX9 453 aaPredicted RBP31.02■■■□□ 2.56
FOXP4-204ENST00000373063 GRWD1Q9BQ67 446 aaKnown RBP eCLIP31■■■□□ 2.558e-8■□□□□ 9.7
FOXP4-204ENST00000373063 SCAF1Q9H7N4 1312 aaKnown RBP30.87■■■□□ 2.53
FOXP4-204ENST00000373063 CHIC2Q9UKJ5 165 aa30.83■■■□□ 2.53
FOXP4-204ENST00000373063 TONSLQ96HA7 1378 aa30.8■■■□□ 2.52
FOXP4-204ENST00000373063 TSPY4P0CV99 314 aa30.75■■■□□ 2.51
FOXP4-204ENST00000373063 TSPY10P0CW01 314 aa30.75■■■□□ 2.51
FOXP4-204ENST00000373063 A0A0G2JS52 829 aa30.68■■■□□ 2.5
FOXP4-204ENST00000373063 KCNH8Q96L42 1107 aa30.66■■■□□ 2.5
FOXP4-204ENST00000373063 RB1CC1Q8TDY2 1594 aa30.65■■■□□ 2.5
FOXP4-204ENST00000373063 ZCCHC6Q5VYS8 1495 aaKnown RBP30.65■■■□□ 2.5
FOXP4-204ENST00000373063 SENP3Q9H4L4 574 aaPredicted RBP30.6■■■□□ 2.49
FOXP4-204ENST00000373063 MTUS2Q5JR59 1369 aa30.6■■■□□ 2.49
FOXP4-204ENST00000373063 ZBTB7CA1YPR0 619 aa30.57■■■□□ 2.48
FOXP4-204ENST00000373063 PPP1R15AO75807 674 aaPredicted RBP30.57■■■□□ 2.48
FOXP4-204ENST00000373063 KDM2AQ9Y2K7 1162 aa30.57■■■□□ 2.48
FOXP4-204ENST00000373063 PLEKHG5O94827 1062 aa30.56■■■□□ 2.48
FOXP4-204ENST00000373063 ARID4BQ4LE39 1312 aaPredicted RBP30.56■■■□□ 2.48
FOXP4-204ENST00000373063 C14orf37Q86TY3 774 aa30.55■■■□□ 2.48
FOXP4-204ENST00000373063 CCDC180Q9P1Z9 1646 aa30.51■■■□□ 2.47
FOXP4-204ENST00000373063 GTF3C3Q9Y5Q9 886 aa30.44■■■□□ 2.46
FOXP4-204ENST00000373063 SALL2Q9Y467 1007 aaPredicted RBP30.43■■■□□ 2.46
FOXP4-204ENST00000373063 ERCC6Q03468 1493 aa30.43■■■□□ 2.46
FOXP4-204ENST00000373063 PLEKHD1A6NEE1 506 aa30.41■■■□□ 2.46
FOXP4-204ENST00000373063 FAM9BQ8IZU0 186 aa30.4■■■□□ 2.46
FOXP4-204ENST00000373063 WDR43Q15061 677 aaKnown RBP eCLIP30.37■■■□□ 2.452e-6■■□□□ 11.4
FOXP4-204ENST00000373063 NPM2Q86SE8 214 aaKnown RBP30.37■■■□□ 2.45
FOXP4-204ENST00000373063 HAP1P54257 671 aaPredicted RBP30.35■■■□□ 2.45
FOXP4-204ENST00000373063 ANP32AP39687 249 aaKnown RBP30.31■■■□□ 2.44
FOXP4-204ENST00000373063 HSP90AA1P07900 732 aaKnown RBP30.3■■■□□ 2.44
FOXP4-204ENST00000373063 TMC1Q8TDI8 760 aa30.3■■■□□ 2.44
FOXP4-204ENST00000373063 DDX10Q13206 875 aaKnown RBP30.29■■■□□ 2.44
FOXP4-204ENST00000373063 RRP7BPQ9NSQ0 103 aa30.28■■■□□ 2.44
FOXP4-204ENST00000373063 HNRNPUQ00839 825 aaKnown RBP eCLIP30.27■■■□□ 2.446e-7■■□□□ 14.5
FOXP4-204ENST00000373063 BAZ1BQ9UIG0 1483 aaKnown RBP30.24■■■□□ 2.43
FOXP4-204ENST00000373063 UPF2Q9HAU5 1272 aaKnown RBP30.2■■■□□ 2.42
FOXP4-204ENST00000373063 RSF1Q96T23 1441 aaPredicted RBP30.2■■■□□ 2.42
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms