Protein–RNA interactions for Protein: Q9NZP6

NPAP1, Nuclear pore-associated protein 1, humanhuman

Predictions only

Length 1,156 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAP1Q9NZP6 RRAGC-201ENST00000373001 2732 ntAPPRIS P1 TSL 1 (best) BASIC24.46■■□□□ 1.51
NPAP1Q9NZP6 MBOAT7-202ENST00000338624 2076 ntTSL 2 BASIC24.46■■□□□ 1.51
NPAP1Q9NZP6 SHF-206ENST00000560471 2499 ntTSL 5 BASIC24.44■■□□□ 1.5
NPAP1Q9NZP6 ZIC2-201ENST00000376335 2983 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
NPAP1Q9NZP6 MARCH2-202ENST00000381035 1192 ntTSL 5 BASIC24.44■■□□□ 1.5
NPAP1Q9NZP6 AC079305.1-201ENST00000428541 499 ntTSL 3 BASIC24.43■■□□□ 1.5
NPAP1Q9NZP6 LY6K-203ENST00000519387 963 ntAPPRIS ALT2 TSL 2 BASIC24.43■■□□□ 1.5
NPAP1Q9NZP6 CCZ1B-215ENST00000626257 2211 ntTSL 2 BASIC24.43■■□□□ 1.5
NPAP1Q9NZP6 ANKRD13D-211ENST00000511455 2139 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
NPAP1Q9NZP6 SETD8P1-201ENST00000623146 1180 ntBASIC24.41■■□□□ 1.5
NPAP1Q9NZP6 RTN2-201ENST00000245923 2293 ntTSL 1 (best) BASIC24.41■■□□□ 1.5
NPAP1Q9NZP6 TPRA1-202ENST00000355552 1933 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
NPAP1Q9NZP6 FZD2-201ENST00000315323 2112 ntAPPRIS P1 BASIC24.4■■□□□ 1.5
NPAP1Q9NZP6 NFKBIA-209ENST00000557389 1537 ntTSL 2 BASIC24.4■■□□□ 1.5
NPAP1Q9NZP6 FAM220A-201ENST00000313324 2214 ntTSL 1 (best) BASIC24.39■■□□□ 1.5
NPAP1Q9NZP6 ABCB10P1-201ENST00000614297 2181 ntBASIC24.39■■□□□ 1.5
NPAP1Q9NZP6 TXN-202ENST00000374517 869 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.49
NPAP1Q9NZP6 RSG1-201ENST00000375599 1545 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
NPAP1Q9NZP6 AGAP3-216ENST00000479901 1881 ntTSL 5 BASIC24.38■■□□□ 1.49
NPAP1Q9NZP6 IL13RA1-201ENST00000371642 1096 ntTSL 1 (best) BASIC24.36■■□□□ 1.49
NPAP1Q9NZP6 FTCD-204ENST00000397748 1955 ntTSL 1 (best) BASIC24.35■■□□□ 1.49
NPAP1Q9NZP6 CMAS-201ENST00000229329 1787 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
NPAP1Q9NZP6 AC136428.2-201ENST00000563187 214 ntBASIC24.34■■□□□ 1.49
NPAP1Q9NZP6 AC097358.2-201ENST00000607541 1159 ntBASIC24.34■■□□□ 1.49
NPAP1Q9NZP6 KCTD17-209ENST00000610767 1502 ntAPPRIS ALT2 TSL 3 BASIC24.34■■□□□ 1.49
NPAP1Q9NZP6 CCM2-201ENST00000258781 1894 ntAPPRIS P3 TSL 1 (best) BASIC24.34■■□□□ 1.49
NPAP1Q9NZP6 CATIP-201ENST00000289388 1323 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
NPAP1Q9NZP6 ATRNL1-209ENST00000609571 1818 ntTSL 1 (best) BASIC24.33■■□□□ 1.49
NPAP1Q9NZP6 IL1R1-201ENST00000409288 1735 ntTSL 5 BASIC24.33■■□□□ 1.49
NPAP1Q9NZP6 KCTD17-201ENST00000402077 1691 ntAPPRIS P3 TSL 1 (best) BASIC24.32■■□□□ 1.48
NPAP1Q9NZP6 AL133346.1-201ENST00000435287 495 ntTSL 2 BASIC24.32■■□□□ 1.48
NPAP1Q9NZP6 KCNK1-202ENST00000366621 2161 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
NPAP1Q9NZP6 PDCD2-215ENST00000614056 1287 ntTSL 2 BASIC24.29■■□□□ 1.48
NPAP1Q9NZP6 GRK2-204ENST00000526285 1458 ntTSL 5 BASIC24.29■■□□□ 1.48
NPAP1Q9NZP6 ZNF219-201ENST00000360947 3071 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
NPAP1Q9NZP6 PQLC1-202ENST00000357575 2475 ntAPPRIS ALT1 TSL 5 BASIC24.28■■□□□ 1.48
NPAP1Q9NZP6 FGFRL1-205ENST00000510644 2304 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
NPAP1Q9NZP6 ATPAF1-201ENST00000329231 1241 ntTSL 2 BASIC24.27■■□□□ 1.48
NPAP1Q9NZP6 ANKS1B-202ENST00000333732 1675 ntTSL 2 BASIC24.26■■□□□ 1.47
NPAP1Q9NZP6 FSD1L-204ENST00000469022 1836 ntTSL 1 (best) BASIC24.26■■□□□ 1.47
NPAP1Q9NZP6 FMR1-219ENST00000621453 1864 ntTSL 1 (best) BASIC24.26■■□□□ 1.47
NPAP1Q9NZP6 SENP3-201ENST00000321337 2611 ntAPPRIS P1 TSL 1 (best) BASIC24.25■■□□□ 1.47
NPAP1Q9NZP6 LRRC75B-201ENST00000318753 1238 ntAPPRIS P1 TSL 1 (best) BASIC24.24■■□□□ 1.47
NPAP1Q9NZP6 CDKN2D-202ENST00000393599 1422 ntAPPRIS P1 TSL 1 (best) BASIC24.24■■□□□ 1.47
NPAP1Q9NZP6 TMEM266-201ENST00000388942 2520 ntAPPRIS P1 TSL 5 BASIC24.23■■□□□ 1.47
NPAP1Q9NZP6 CCZ1-201ENST00000325974 1802 ntAPPRIS P1 TSL 1 (best) BASIC24.22■■□□□ 1.47
NPAP1Q9NZP6 NADK2-210ENST00000514504 1233 ntTSL 5 BASIC24.22■■□□□ 1.47
NPAP1Q9NZP6 AC068152.1-210ENST00000574741 836 ntTSL 3 BASIC24.22■■□□□ 1.47
NPAP1Q9NZP6 COL13A1-203ENST00000398969 2267 ntAPPRIS ALT2 TSL 5 BASIC24.21■■□□□ 1.47
NPAP1Q9NZP6 ZFAND2B-204ENST00000409217 886 ntTSL 2 BASIC24.21■■□□□ 1.47
NPAP1Q9NZP6 CAPNS1-217ENST00000629983 799 ntTSL 5 BASIC24.2■■□□□ 1.46
NPAP1Q9NZP6 SOX1-201ENST00000330949 2842 ntAPPRIS P1 BASIC24.2■■□□□ 1.46
NPAP1Q9NZP6 CTBP1-201ENST00000290921 2297 ntTSL 1 (best) BASIC24.18■■□□□ 1.46
NPAP1Q9NZP6 PKDCC-201ENST00000294964 2502 ntAPPRIS P1 TSL 1 (best) BASIC24.18■■□□□ 1.46
NPAP1Q9NZP6 MPST-201ENST00000341116 1504 ntAPPRIS P1 TSL 5 BASIC24.18■■□□□ 1.46
NPAP1Q9NZP6 RRNAD1-201ENST00000368216 2254 ntAPPRIS P3 TSL 1 (best) BASIC24.17■■□□□ 1.46
NPAP1Q9NZP6 CHCHD4-201ENST00000295767 1603 ntTSL 2 BASIC24.16■■□□□ 1.46
NPAP1Q9NZP6 LGALS3-201ENST00000254301 1146 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
NPAP1Q9NZP6 AL133380.1-201ENST00000506013 324 ntBASIC24.15■■□□□ 1.46
NPAP1Q9NZP6 GIPC1-201ENST00000345425 1782 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
NPAP1Q9NZP6 TPRA1-209ENST00000489960 1903 ntAPPRIS P1 TSL 5 BASIC24.15■■□□□ 1.46
NPAP1Q9NZP6 TP53I13-201ENST00000301057 1530 ntAPPRIS P2 TSL 1 (best) BASIC24.15■■□□□ 1.46
NPAP1Q9NZP6 CACNG6-202ENST00000346968 645 ntTSL 5 BASIC24.14■■□□□ 1.45
NPAP1Q9NZP6 MAPK4-202ENST00000540640 1576 ntTSL 2 BASIC24.13■■□□□ 1.45
NPAP1Q9NZP6 SUZ12P1-203ENST00000578195 985 ntBASIC24.13■■□□□ 1.45
NPAP1Q9NZP6 TWIST1-201ENST00000242261 1666 ntAPPRIS P1 TSL 1 (best) BASIC24.11■■□□□ 1.45
NPAP1Q9NZP6 AUTS2-202ENST00000403018 957 ntTSL 1 (best) BASIC24.11■■□□□ 1.45
NPAP1Q9NZP6 RDX-206ENST00000528900 1814 ntTSL 1 (best) BASIC24.11■■□□□ 1.45
NPAP1Q9NZP6 SNTG2-201ENST00000308624 1888 ntAPPRIS P1 TSL 1 (best) BASIC24.11■■□□□ 1.45
NPAP1Q9NZP6 AL109917.1-201ENST00000412228 906 ntTSL 2 BASIC24.09■■□□□ 1.45
NPAP1Q9NZP6 UCK1-201ENST00000372208 2063 ntTSL 1 (best) BASIC24.09■■□□□ 1.45
NPAP1Q9NZP6 AC243773.2-204ENST00000621428 1462 ntTSL 1 (best) BASIC24.08■■□□□ 1.45
NPAP1Q9NZP6 FTCD-203ENST00000397746 1878 ntAPPRIS P1 TSL 1 (best) BASIC24.08■■□□□ 1.45
NPAP1Q9NZP6 CAHM-201ENST00000604200 896 ntBASIC24.07■■□□□ 1.44
NPAP1Q9NZP6 TPRA1-201ENST00000296210 1725 ntTSL 1 (best) BASIC24.07■■□□□ 1.44
NPAP1Q9NZP6 TMEM9-201ENST00000367330 1959 ntAPPRIS P3 TSL 1 (best) BASIC24.06■■□□□ 1.44
NPAP1Q9NZP6 FTCDNL1-201ENST00000416668 944 ntTSL 1 (best) BASIC24.06■■□□□ 1.44
NPAP1Q9NZP6 AC092755.2-201ENST00000560199 402 ntTSL 3 BASIC24.05■■□□□ 1.44
NPAP1Q9NZP6 AC006486.1-201ENST00000594664 634 ntAPPRIS P1 TSL 3 BASIC24.05■■□□□ 1.44
NPAP1Q9NZP6 PLSCR3-202ENST00000535512 2067 ntAPPRIS P1 TSL 1 (best) BASIC24.05■■□□□ 1.44
NPAP1Q9NZP6 PLSCR3-214ENST00000619711 2066 ntTSL 5 BASIC24.05■■□□□ 1.44
NPAP1Q9NZP6 ANGPTL6-201ENST00000253109 1900 ntAPPRIS P1 TSL 1 (best) BASIC24.04■■□□□ 1.44
NPAP1Q9NZP6 PCBD2-201ENST00000254908 1223 ntAPPRIS P1 TSL 1 (best) BASIC24.04■■□□□ 1.44
NPAP1Q9NZP6 JUND-201ENST00000252818 1863 ntAPPRIS P1 BASIC24.04■■□□□ 1.44
NPAP1Q9NZP6 NMB-201ENST00000360476 1007 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.44
NPAP1Q9NZP6 LMO1-202ENST00000428101 1038 ntAPPRIS ALT1 TSL 1 (best) BASIC24.02■■□□□ 1.44
NPAP1Q9NZP6 HOPX-206ENST00000503639 1248 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.44
NPAP1Q9NZP6 TMEM229A-201ENST00000455783 2108 ntAPPRIS P1 BASIC24.02■■□□□ 1.44
NPAP1Q9NZP6 TRAPPC10-202ENST00000380221 1763 ntTSL 1 (best) BASIC24.01■■□□□ 1.43
NPAP1Q9NZP6 FAAP20-204ENST00000400919 1413 ntTSL 3 BASIC24.01■■□□□ 1.43
NPAP1Q9NZP6 RTN2-202ENST00000344680 2063 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
NPAP1Q9NZP6 AL391121.1-201ENST00000607967 1349 ntBASIC24■■□□□ 1.43
NPAP1Q9NZP6 SLC22A23-201ENST00000380298 1574 ntTSL 1 (best) BASIC23.99■■□□□ 1.43
NPAP1Q9NZP6 FAAH-201ENST00000243167 2094 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
NPAP1Q9NZP6 TPM2-203ENST00000378292 2147 ntAPPRIS ALT1 TSL 1 (best) BASIC23.98■■□□□ 1.43
NPAP1Q9NZP6 FGF3-201ENST00000334134 892 ntAPPRIS P1 TSL 1 (best) BASIC23.97■■□□□ 1.43
NPAP1Q9NZP6 VWA1-201ENST00000338660 2147 ntTSL 2 BASIC23.97■■□□□ 1.43
NPAP1Q9NZP6 PICK1-201ENST00000356976 2055 ntAPPRIS P1 TSL 1 (best) BASIC23.97■■□□□ 1.43
NPAP1Q9NZP6 S100A10-202ENST00000368811 1202 ntAPPRIS P1 TSL 1 (best) BASIC23.97■■□□□ 1.43
NPAP1Q9NZP6 FAM220A-206ENST00000616824 2211 ntTSL 1 (best) BASIC23.97■■□□□ 1.43
Retrieved 100 of 98,524 protein–RNA pairs in 38.5 ms