Protein–RNA interactions for Protein: Q8NDV7

TNRC6A, Trinucleotide repeat-containing gene 6A protein, humanhuman

Known RBP Predictions only

Length 1,962 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNRC6AQ8NDV7 SLC25A10-203ENST00000545862 1911 ntTSL 1 (best) BASIC25.27■■□□□ 1.64
TNRC6AQ8NDV7 BOD1-201ENST00000285908 1286 ntTSL 1 (best) BASIC25.27■■□□□ 1.64
TNRC6AQ8NDV7 BOD1-206ENST00000480951 814 ntTSL 2 BASIC25.27■■□□□ 1.64
TNRC6AQ8NDV7 KIAA2013-203ENST00000616327 2170 ntAPPRIS P1 TSL 5 BASIC25.26■■□□□ 1.63
TNRC6AQ8NDV7 CSNK1E-205ENST00000405675 2127 ntTSL 5 BASIC25.26■■□□□ 1.63
TNRC6AQ8NDV7 RPS2-209ENST00000529806 993 ntTSL 3 BASIC25.25■■□□□ 1.63
TNRC6AQ8NDV7 NME2-202ENST00000393190 866 ntAPPRIS P1 TSL 1 (best) BASIC25.24■■□□□ 1.63
TNRC6AQ8NDV7 LANCL3-203ENST00000614025 1469 ntTSL 2 BASIC25.22■■□□□ 1.63
TNRC6AQ8NDV7 MBP-237ENST00000579129 1052 ntTSL 5 BASIC25.22■■□□□ 1.63
TNRC6AQ8NDV7 LSM14B-204ENST00000370915 1079 ntTSL 1 (best) BASIC25.21■■□□□ 1.63
TNRC6AQ8NDV7 UBALD1-202ENST00000587615 799 ntTSL 2 BASIC25.2■■□□□ 1.63
TNRC6AQ8NDV7 AC004540.2-201ENST00000451368 611 ntTSL 2 BASIC25.2■■□□□ 1.62
TNRC6AQ8NDV7 ACOT12-204ENST00000513751 612 ntTSL 1 (best) BASIC25.19■■□□□ 1.62
TNRC6AQ8NDV7 TSEN34-203ENST00000396388 1349 ntAPPRIS P1 TSL 1 (best) BASIC25.18■■□□□ 1.62
TNRC6AQ8NDV7 MTMR1-214ENST00000542156 1227 ntTSL 1 (best) BASIC25.17■■□□□ 1.62
TNRC6AQ8NDV7 PDCD2-209ENST00000542896 1082 ntTSL 2 BASIC25.17■■□□□ 1.62
TNRC6AQ8NDV7 VEGFA-231ENST00000640499 1188 ntAPPRIS P3 TSL 1 (best) BASIC25.17■■□□□ 1.62
TNRC6AQ8NDV7 CACNG6-201ENST00000252729 1853 ntAPPRIS P1 TSL 1 (best) BASIC25.16■■□□□ 1.62
TNRC6AQ8NDV7 HGH1-207ENST00000628266 258 ntTSL 5 BASIC25.16■■□□□ 1.62
TNRC6AQ8NDV7 ARHGDIG-201ENST00000219409 949 ntAPPRIS P1 TSL 1 (best) BASIC25.14■■□□□ 1.62
TNRC6AQ8NDV7 WASH5P-204ENST00000632292 975 ntBASIC25.14■■□□□ 1.62
TNRC6AQ8NDV7 TRAPPC10-202ENST00000380221 1763 ntTSL 1 (best) BASIC25.14■■□□□ 1.61
TNRC6AQ8NDV7 WNT5A-AS1-201ENST00000469484 500 ntTSL 3 BASIC25.13■■□□□ 1.61
TNRC6AQ8NDV7 SSU72-201ENST00000291386 1290 ntAPPRIS P1 TSL 1 (best) BASIC25.13■■□□□ 1.61
TNRC6AQ8NDV7 PPP1R14B-201ENST00000309318 982 ntAPPRIS P1 TSL 1 (best) BASIC25.13■■□□□ 1.61
TNRC6AQ8NDV7 HDAC11-206ENST00000405025 576 ntTSL 4 BASIC25.13■■□□□ 1.61
TNRC6AQ8NDV7 NAA50-207ENST00000493900 962 ntAPPRIS ALT1 TSL 2 BASIC25.13■■□□□ 1.61
TNRC6AQ8NDV7 MFAP2-202ENST00000375535 1260 ntTSL 1 (best) BASIC25.12■■□□□ 1.61
TNRC6AQ8NDV7 JUND-201ENST00000252818 1863 ntAPPRIS P1 BASIC25.12■■□□□ 1.61
TNRC6AQ8NDV7 DBP-205ENST00000601104 1489 ntTSL 1 (best) BASIC25.12■■□□□ 1.61
TNRC6AQ8NDV7 CDKN2A-201ENST00000304494 1218 ntTSL 1 (best) BASIC25.11■■□□□ 1.61
TNRC6AQ8NDV7 RPS2-202ENST00000526522 924 ntTSL 2 BASIC25.11■■□□□ 1.61
TNRC6AQ8NDV7 SMARCD3-201ENST00000262188 1993 ntAPPRIS P1 TSL 1 (best) BASIC25.11■■□□□ 1.61
TNRC6AQ8NDV7 MISP3-201ENST00000269720 1424 ntAPPRIS ALT2 TSL 5 BASIC25.1■■□□□ 1.61
TNRC6AQ8NDV7 HS3ST6-201ENST00000454677 1273 ntAPPRIS P1 TSL 1 (best) BASIC25.1■■□□□ 1.61
TNRC6AQ8NDV7 MAD2L2-205ENST00000376669 864 ntTSL 3 BASIC25.09■■□□□ 1.61
TNRC6AQ8NDV7 TCEA2-202ENST00000343484 1235 ntAPPRIS P1 TSL 1 (best) BASIC25.08■■□□□ 1.61
TNRC6AQ8NDV7 NMB-202ENST00000394588 1017 ntTSL 1 (best) BASIC25.08■■□□□ 1.61
TNRC6AQ8NDV7 GTF3C4-202ENST00000483873 1417 ntTSL 3 BASIC25.07■■□□□ 1.6
TNRC6AQ8NDV7 MPST-201ENST00000341116 1504 ntAPPRIS P1 TSL 5 BASIC25.07■■□□□ 1.6
TNRC6AQ8NDV7 AC096888.1-201ENST00000487097 565 ntTSL 4 BASIC25.06■■□□□ 1.6
TNRC6AQ8NDV7 ZNRF2P2-203ENST00000454624 420 ntBASIC25.05■■□□□ 1.6
TNRC6AQ8NDV7 ATRAID-201ENST00000380171 1240 ntTSL 1 (best) BASIC25.05■■□□□ 1.6
TNRC6AQ8NDV7 DUSP14-206ENST00000617516 1537 ntAPPRIS P1 TSL 1 (best) BASIC25.04■■□□□ 1.6
TNRC6AQ8NDV7 SLC35D2-202ENST00000375257 889 ntTSL 2 BASIC25.04■■□□□ 1.6
TNRC6AQ8NDV7 REPIN1-204ENST00000466559 1022 ntTSL 1 (best) BASIC25.03■■□□□ 1.6
TNRC6AQ8NDV7 GSTP1-202ENST00000398606 965 ntAPPRIS P1 TSL 1 (best) BASIC25.02■■□□□ 1.6
TNRC6AQ8NDV7 VEGFA-207ENST00000413642 1197 ntAPPRIS ALT2 TSL 1 (best) BASIC25.02■■□□□ 1.6
TNRC6AQ8NDV7 CAPNS1-211ENST00000590874 926 ntTSL 5 BASIC25.02■■□□□ 1.6
TNRC6AQ8NDV7 CHMP4B-201ENST00000217402 1646 ntAPPRIS P1 TSL 1 (best) BASIC25■■□□□ 1.59
TNRC6AQ8NDV7 PSMG4-202ENST00000380305 489 ntTSL 5 BASIC24.99■■□□□ 1.59
TNRC6AQ8NDV7 CRIP1-201ENST00000330233 1311 ntAPPRIS P1 TSL 1 (best) BASIC24.98■■□□□ 1.59
TNRC6AQ8NDV7 AC013394.1-201ENST00000629685 808 ntAPPRIS P1 TSL 5 BASIC24.98■■□□□ 1.59
TNRC6AQ8NDV7 HDAC3-201ENST00000305264 1959 ntAPPRIS P1 TSL 1 (best) BASIC24.97■■□□□ 1.59
TNRC6AQ8NDV7 TERF2-207ENST00000567296 1129 ntTSL 1 (best) BASIC24.96■■□□□ 1.59
TNRC6AQ8NDV7 AL451007.3-201ENST00000640271 588 ntAPPRIS P1 BASIC24.96■■□□□ 1.59
TNRC6AQ8NDV7 CCDC149-203ENST00000502801 1079 ntTSL 1 (best) BASIC24.95■■□□□ 1.58
TNRC6AQ8NDV7 AC187653.1-201ENST00000506382 702 ntAPPRIS P1 TSL 5 BASIC24.95■■□□□ 1.58
TNRC6AQ8NDV7 MNX1-207ENST00000543409 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC24.95■■□□□ 1.58
TNRC6AQ8NDV7 U2AF2-206ENST00000590551 1104 ntTSL 3 BASIC24.94■■□□□ 1.58
TNRC6AQ8NDV7 KCNK1-202ENST00000366621 2161 ntAPPRIS P1 TSL 1 (best) BASIC24.94■■□□□ 1.58
TNRC6AQ8NDV7 VAX2-201ENST00000234392 1147 ntAPPRIS P1 TSL 1 (best) BASIC24.93■■□□□ 1.58
TNRC6AQ8NDV7 GSC-201ENST00000238558 1264 ntAPPRIS P1 TSL 1 (best) BASIC24.93■■□□□ 1.58
TNRC6AQ8NDV7 NREP-216ENST00000508870 540 ntAPPRIS P1 TSL 4 BASIC24.93■■□□□ 1.58
TNRC6AQ8NDV7 NADK2-202ENST00000381937 2243 ntAPPRIS P1 TSL 2 BASIC24.92■■□□□ 1.58
TNRC6AQ8NDV7 RPS2-201ENST00000343262 985 ntAPPRIS P1 TSL 1 (best) BASIC24.91■■□□□ 1.58
TNRC6AQ8NDV7 RCE1-201ENST00000309657 1485 ntAPPRIS P1 TSL 1 (best) BASIC24.91■■□□□ 1.58
TNRC6AQ8NDV7 GRASP-206ENST00000552049 1688 ntTSL 1 (best) BASIC24.9■■□□□ 1.58
TNRC6AQ8NDV7 AC116407.1-201ENST00000398832 1599 ntTSL 2 BASIC24.9■■□□□ 1.58
TNRC6AQ8NDV7 DUX4L29-201ENST00000425409 679 ntBASIC24.9■■□□□ 1.58
TNRC6AQ8NDV7 LAPTM4B-203ENST00000521545 915 ntAPPRIS P1 TSL 1 (best) BASIC24.9■■□□□ 1.58
TNRC6AQ8NDV7 GRPEL2-204ENST00000513661 546 ntTSL 2 BASIC24.89■■□□□ 1.57
TNRC6AQ8NDV7 IL1R1-201ENST00000409288 1735 ntTSL 5 BASIC24.88■■□□□ 1.57
TNRC6AQ8NDV7 SDCCAG3-202ENST00000357365 2304 ntAPPRIS P4 TSL 5 BASIC24.88■■□□□ 1.57
TNRC6AQ8NDV7 CGREF1-202ENST00000312734 1610 ntAPPRIS P2 TSL 5 BASIC24.88■■□□□ 1.57
TNRC6AQ8NDV7 TWIST1-201ENST00000242261 1666 ntAPPRIS P1 TSL 1 (best) BASIC24.87■■□□□ 1.57
TNRC6AQ8NDV7 FEZF2-201ENST00000283268 2074 ntAPPRIS P1 TSL 1 (best) BASIC24.85■■□□□ 1.57
TNRC6AQ8NDV7 HSD11B1L-209ENST00000577917 1553 ntTSL 1 (best) BASIC24.84■■□□□ 1.57
TNRC6AQ8NDV7 TXNL4A-210ENST00000591711 669 ntTSL 2 BASIC24.84■■□□□ 1.57
TNRC6AQ8NDV7 SERINC2-201ENST00000373709 1997 ntAPPRIS P1 TSL 1 (best) BASIC24.84■■□□□ 1.57
TNRC6AQ8NDV7 CTDNEP1-210ENST00000574322 1708 ntAPPRIS P1 TSL 1 (best) BASIC24.84■■□□□ 1.57
TNRC6AQ8NDV7 RNF130-201ENST00000261947 1766 ntTSL 1 (best) BASIC24.82■■□□□ 1.56
TNRC6AQ8NDV7 UBE2A-207ENST00000628549 934 ntTSL 2 BASIC24.82■■□□□ 1.56
TNRC6AQ8NDV7 RNF150-204ENST00000507500 1530 ntTSL 1 (best) BASIC24.82■■□□□ 1.56
TNRC6AQ8NDV7 STUB1-201ENST00000219548 1472 ntAPPRIS P1 TSL 1 (best) BASIC24.81■■□□□ 1.56
TNRC6AQ8NDV7 DPP6-204ENST00000406326 2012 ntTSL 1 (best) BASIC24.8■■□□□ 1.56
TNRC6AQ8NDV7 MIR4449-201ENST00000578365 66 ntBASIC24.8■■□□□ 1.56
TNRC6AQ8NDV7 GDI1-215ENST00000630693 786 ntTSL 4 BASIC24.8■■□□□ 1.56
TNRC6AQ8NDV7 ACTR3B-202ENST00000377776 1566 ntTSL 1 (best) BASIC24.79■■□□□ 1.56
TNRC6AQ8NDV7 SDCCAG3-204ENST00000371725 2129 ntAPPRIS ALT2 TSL 5 BASIC24.79■■□□□ 1.56
TNRC6AQ8NDV7 AC016575.1-201ENST00000607026 382 ntBASIC24.79■■□□□ 1.56
TNRC6AQ8NDV7 CPNE1-203ENST00000397442 1695 ntTSL 5 BASIC24.79■■□□□ 1.56
TNRC6AQ8NDV7 AC021231.2-201ENST00000594613 730 ntBASIC24.78■■□□□ 1.56
TNRC6AQ8NDV7 KRT18-201ENST00000388835 1562 ntAPPRIS P1 TSL 1 (best) BASIC24.78■■□□□ 1.56
TNRC6AQ8NDV7 GNPTAB-206ENST00000549940 1678 ntTSL 1 (best) BASIC24.78■■□□□ 1.56
TNRC6AQ8NDV7 AP000547.3-202ENST00000592107 1019 ntTSL 1 (best) BASIC24.78■■□□□ 1.56
TNRC6AQ8NDV7 UBE2L6-201ENST00000287156 1354 ntAPPRIS P1 TSL 1 (best) BASIC24.78■■□□□ 1.56
TNRC6AQ8NDV7 SSBP3-204ENST00000371320 2077 ntAPPRIS P3 TSL 1 (best) BASIC24.78■■□□□ 1.56
TNRC6AQ8NDV7 HINT2-201ENST00000259667 628 ntAPPRIS P1 TSL 1 (best) BASIC24.77■■□□□ 1.56
TNRC6AQ8NDV7 DNLZ-201ENST00000371738 724 ntAPPRIS P1 TSL 1 (best) BASIC24.76■■□□□ 1.55
Retrieved 100 of 98,524 protein–RNA pairs in 29.5 ms