Protein–RNA interactions for Protein: Q8NDV7

TNRC6A, Trinucleotide repeat-containing gene 6A protein, humanhuman

Known RBP Predictions only

Length 1,962 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNRC6AQ8NDV7 FBLL1-201ENST00000338333 1519 ntAPPRIS P1 BASIC31.79■■■□□ 2.68
TNRC6AQ8NDV7 SSSCA1-205ENST00000527920 806 ntTSL 3 BASIC31.37■■■□□ 2.61
TNRC6AQ8NDV7 HRAS-203ENST00000397596 1100 ntAPPRIS P1 TSL 3 BASIC31.09■■■□□ 2.57
TNRC6AQ8NDV7 PPP1CA-203ENST00000376745 1476 ntAPPRIS P1 TSL 1 (best) BASIC30.97■■■□□ 2.55
TNRC6AQ8NDV7 AES-202ENST00000327141 1608 ntAPPRIS P1 TSL 1 (best) BASIC30.77■■■□□ 2.52
TNRC6AQ8NDV7 CSNK1E-204ENST00000403904 1580 ntAPPRIS P1 TSL 5 BASIC30.67■■■□□ 2.5
TNRC6AQ8NDV7 TCF15-201ENST00000246080 1555 ntAPPRIS P1 TSL 1 (best) BASIC30.48■■■□□ 2.47
TNRC6AQ8NDV7 AL356512.1-201ENST00000607453 1739 ntBASIC30.43■■■□□ 2.46
TNRC6AQ8NDV7 ANKRD60-201ENST00000457363 1038 ntAPPRIS P1 TSL 5 BASIC30.18■■■□□ 2.42
TNRC6AQ8NDV7 PPP2CB-204ENST00000518564 691 ntTSL 3 BASIC30.08■■■□□ 2.41
TNRC6AQ8NDV7 CACNG8-202ENST00000638874 1278 ntAPPRIS P2 TSL 1 (best) BASIC30.05■■■□□ 2.4
TNRC6AQ8NDV7 TAF5L-202ENST00000366674 492 ntTSL 3 BASIC30■■■□□ 2.39
TNRC6AQ8NDV7 CDV3-203ENST00000431519 955 ntTSL 1 (best) BASIC29.93■■■□□ 2.38
TNRC6AQ8NDV7 OLFM1-208ENST00000392991 1057 ntTSL 2 BASIC29.9■■■□□ 2.38
TNRC6AQ8NDV7 ZFYVE21-201ENST00000216602 1521 ntAPPRIS ALT2 TSL 2 BASIC29.82■■■□□ 2.36
TNRC6AQ8NDV7 PHF10-201ENST00000339209 1719 ntAPPRIS P4 TSL 1 (best) BASIC29.77■■■□□ 2.36
TNRC6AQ8NDV7 GALR3-201ENST00000249041 1157 ntAPPRIS P1 TSL 1 (best) BASIC29.66■■■□□ 2.34
TNRC6AQ8NDV7 MPND-201ENST00000262966 1567 ntAPPRIS P3 TSL 1 (best) BASIC29.62■■■□□ 2.33
TNRC6AQ8NDV7 ALYREF-202ENST00000505490 1088 ntAPPRIS P1 TSL 1 (best) BASIC29.52■■■□□ 2.32
TNRC6AQ8NDV7 HES6-203ENST00000409160 1600 ntTSL 2 BASIC29.31■■■□□ 2.28
TNRC6AQ8NDV7 CMTM4-202ENST00000394106 1187 ntAPPRIS P1 TSL 1 (best) BASIC29.28■■■□□ 2.28
TNRC6AQ8NDV7 CMTM4-204ENST00000563952 1023 ntTSL 1 (best) BASIC29.28■■■□□ 2.28
TNRC6AQ8NDV7 PTF1A-201ENST00000376504 1537 ntAPPRIS P1 TSL 1 (best) BASIC29.13■■■□□ 2.25
TNRC6AQ8NDV7 GIPC1-205ENST00000586027 1386 ntAPPRIS P1 TSL 2 BASIC29.13■■■□□ 2.25
TNRC6AQ8NDV7 INO80B-201ENST00000233331 1261 ntAPPRIS P1 TSL 1 (best) BASIC29.12■■■□□ 2.25
TNRC6AQ8NDV7 AL357033.3-201ENST00000620143 614 ntTSL 3 BASIC29.12■■■□□ 2.25
TNRC6AQ8NDV7 PRR5-217ENST00000617066 1726 ntTSL 5 BASIC29.09■■■□□ 2.25
TNRC6AQ8NDV7 CYBA-201ENST00000261623 797 ntAPPRIS P1 TSL 1 (best) BASIC29.03■■■□□ 2.24
TNRC6AQ8NDV7 MAF-203ENST00000569649 1217 ntAPPRIS ALT2 TSL 5 BASIC29.03■■■□□ 2.24
TNRC6AQ8NDV7 FAM89B-203ENST00000530349 1263 ntAPPRIS P1 TSL 2 BASIC29■■■□□ 2.23
TNRC6AQ8NDV7 INO80B-203ENST00000409917 796 ntTSL 2 BASIC28.98■■■□□ 2.23
TNRC6AQ8NDV7 PRR5-216ENST00000611394 1843 ntTSL 2 BASIC28.96■■■□□ 2.23
TNRC6AQ8NDV7 AC006077.2-201ENST00000623591 457 ntBASIC28.72■■■□□ 2.19
TNRC6AQ8NDV7 AC008738.5-201ENST00000587312 482 ntTSL 3 BASIC28.66■■■□□ 2.18
TNRC6AQ8NDV7 ZNRF2P1-201ENST00000441407 443 ntBASIC28.63■■■□□ 2.17
TNRC6AQ8NDV7 SATB1-AS1-216ENST00000598149 1119 ntTSL 2 BASIC28.63■■■□□ 2.17
TNRC6AQ8NDV7 AC015813.7-201ENST00000623294 581 ntBASIC28.58■■■□□ 2.17
TNRC6AQ8NDV7 SLC25A28-201ENST00000370495 1451 ntAPPRIS P1 TSL 1 (best) BASIC28.49■■■□□ 2.15
TNRC6AQ8NDV7 CSNK1E-206ENST00000413574 1631 ntTSL 5 BASIC28.46■■■□□ 2.15
TNRC6AQ8NDV7 ARTN-201ENST00000372354 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC28.4■■■□□ 2.14
TNRC6AQ8NDV7 PRELID2-202ENST00000394450 1102 ntTSL 1 (best) BASIC28.3■■■□□ 2.12
TNRC6AQ8NDV7 NT5DC2-203ENST00000459839 1639 ntTSL 1 (best) BASIC28.25■■■□□ 2.11
TNRC6AQ8NDV7 FAM89B-202ENST00000449319 1337 ntTSL 1 (best) BASIC28.2■■■□□ 2.11
TNRC6AQ8NDV7 C11orf68-202ENST00000449692 1559 ntAPPRIS P3 TSL 1 (best) BASIC28.16■■■□□ 2.1
TNRC6AQ8NDV7 AP002365.1-201ENST00000603448 772 ntBASIC28.15■■■□□ 2.1
TNRC6AQ8NDV7 SEPT3-204ENST00000406029 1866 ntTSL 5 BASIC28.1■■■□□ 2.09
TNRC6AQ8NDV7 UBE2M-201ENST00000253023 1508 ntAPPRIS P1 TSL 1 (best) BASIC28.09■■■□□ 2.09
TNRC6AQ8NDV7 NECTIN3-201ENST00000319792 1549 ntAPPRIS ALT2 TSL 1 (best) BASIC28.07■■■□□ 2.08
TNRC6AQ8NDV7 CAPNS1-206ENST00000588815 1471 ntAPPRIS P2 TSL 1 (best) BASIC28.04■■■□□ 2.08
TNRC6AQ8NDV7 HAGHL-201ENST00000341413 1701 ntTSL 2 BASIC28.01■■■□□ 2.08
TNRC6AQ8NDV7 FAM58A-202ENST00000440428 1164 ntAPPRIS P2 TSL 2 BASIC27.92■■■□□ 2.06
TNRC6AQ8NDV7 NKAIN4-203ENST00000370316 1430 ntAPPRIS P1 TSL 1 (best) BASIC27.87■■■□□ 2.05
TNRC6AQ8NDV7 H2AFV-202ENST00000308153 752 ntAPPRIS P4 TSL 1 (best) BASIC27.79■■■□□ 2.04
TNRC6AQ8NDV7 PQLC1-211ENST00000590381 1247 ntTSL 2 BASIC27.77■■■□□ 2.04
TNRC6AQ8NDV7 FGF2-203ENST00000614010 867 ntTSL 1 (best) BASIC27.76■■■□□ 2.03
TNRC6AQ8NDV7 AL355297.4-201ENST00000603191 1249 ntTSL 3 BASIC27.75■■■□□ 2.03
TNRC6AQ8NDV7 AC079848.1-201ENST00000511301 327 ntTSL 3 BASIC27.74■■■□□ 2.03
TNRC6AQ8NDV7 ARTN-211ENST00000498139 1303 ntAPPRIS P4 TSL 1 (best) BASIC27.74■■■□□ 2.03
TNRC6AQ8NDV7 HMGB1-205ENST00000399494 1282 ntAPPRIS P1 TSL 2 BASIC27.71■■■□□ 2.03
TNRC6AQ8NDV7 AC005524.1-203ENST00000586528 451 ntTSL 3 BASIC27.69■■■□□ 2.02
TNRC6AQ8NDV7 MBD2-202ENST00000398398 1237 ntTSL 2 BASIC27.69■■■□□ 2.02
TNRC6AQ8NDV7 MBD2-205ENST00000583046 1182 ntTSL 1 (best) BASIC27.69■■■□□ 2.02
TNRC6AQ8NDV7 NRGN-201ENST00000284292 1306 ntAPPRIS P1 TSL 1 (best) BASIC27.66■■■□□ 2.02
TNRC6AQ8NDV7 SYNGR1-202ENST00000318801 1361 ntTSL 1 (best) BASIC27.64■■■□□ 2.02
TNRC6AQ8NDV7 LINC01578-201ENST00000553829 732 ntTSL 2 BASIC27.62■■■□□ 2.01
TNRC6AQ8NDV7 MAP6D1-202ENST00000431348 890 ntAPPRIS ALT2 TSL 2 BASIC27.61■■■□□ 2.01
TNRC6AQ8NDV7 CBX4-202ENST00000448310 718 ntAPPRIS ALT2 TSL 3 BASIC27.6■■■□□ 2.01
TNRC6AQ8NDV7 CLEC3B-201ENST00000296130 936 ntAPPRIS P1 TSL 1 (best) BASIC27.58■■■□□ 2.01
TNRC6AQ8NDV7 MSANTD3-203ENST00000395067 1362 ntAPPRIS P1 TSL 1 (best) BASIC27.57■■■□□ 2
TNRC6AQ8NDV7 HOXB3-208ENST00000476342 1420 ntAPPRIS P1 TSL 1 (best) BASIC27.54■■■□□ 2
TNRC6AQ8NDV7 RAN-202ENST00000392369 1530 ntAPPRIS P1 TSL 1 (best) BASIC27.52■■■□□ 2
TNRC6AQ8NDV7 METRNL-201ENST00000320095 1605 ntAPPRIS P1 TSL 1 (best) BASIC27.51■■■□□ 2
TNRC6AQ8NDV7 NKX1-1-201ENST00000422806 1236 ntAPPRIS P1 TSL 5 BASIC27.51■■■□□ 2
TNRC6AQ8NDV7 LIMCH1-211ENST00000509638 1570 ntTSL 1 (best) BASIC27.47■■□□□ 1.99
TNRC6AQ8NDV7 HRH3-201ENST00000317393 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC27.47■■□□□ 1.99
TNRC6AQ8NDV7 FAM149A-215ENST00000514153 2070 ntAPPRIS P2 TSL 5 BASIC27.42■■□□□ 1.98
TNRC6AQ8NDV7 CHCHD4-202ENST00000396914 1405 ntAPPRIS P1 TSL 1 (best) BASIC27.42■■□□□ 1.98
TNRC6AQ8NDV7 NT5M-207ENST00000616989 1635 ntTSL 1 (best) BASIC27.38■■□□□ 1.97
TNRC6AQ8NDV7 DYNLL1-207ENST00000549989 719 ntAPPRIS P1 TSL 1 (best) BASIC27.34■■□□□ 1.97
TNRC6AQ8NDV7 DYNLL1-208ENST00000550178 581 ntBASIC27.34■■□□□ 1.97
TNRC6AQ8NDV7 AP001107.7-201ENST00000533287 272 ntTSL 2 BASIC27.33■■□□□ 1.97
TNRC6AQ8NDV7 GSTZ1-201ENST00000216465 1338 ntAPPRIS P2 TSL 1 (best) BASIC27.33■■□□□ 1.97
TNRC6AQ8NDV7 SAP30-201ENST00000296504 1108 ntAPPRIS P1 TSL 1 (best) BASIC27.32■■□□□ 1.96
TNRC6AQ8NDV7 ANAPC11-203ENST00000392376 687 ntAPPRIS P1 TSL 1 (best) BASIC27.29■■□□□ 1.96
TNRC6AQ8NDV7 AGTRAP-204ENST00000376637 1067 ntTSL 2 BASIC27.28■■□□□ 1.96
TNRC6AQ8NDV7 AL136373.1-201ENST00000634804 1449 ntAPPRIS P1 BASIC27.27■■□□□ 1.96
TNRC6AQ8NDV7 INAFM1-201ENST00000552360 1255 ntAPPRIS P1 BASIC27.26■■□□□ 1.95
TNRC6AQ8NDV7 ARTN-204ENST00000438616 889 ntTSL 1 (best) BASIC27.23■■□□□ 1.95
TNRC6AQ8NDV7 PWWP2B-202ENST00000631148 2013 ntTSL 5 BASIC27.21■■□□□ 1.95
TNRC6AQ8NDV7 LINC01578-203ENST00000554669 578 ntTSL 5 BASIC27.2■■□□□ 1.94
TNRC6AQ8NDV7 ECHS1-201ENST00000368547 1617 ntAPPRIS P1 TSL 1 (best) BASIC27.19■■□□□ 1.94
TNRC6AQ8NDV7 CYHR1-209ENST00000530374 1870 ntTSL 3 BASIC27.19■■□□□ 1.94
TNRC6AQ8NDV7 CCM2-219ENST00000544363 1620 ntTSL 3 BASIC27.18■■□□□ 1.94
TNRC6AQ8NDV7 NT5DC2-202ENST00000422318 1795 ntAPPRIS ALT2 TSL 5 BASIC27.18■■□□□ 1.94
TNRC6AQ8NDV7 PLPP2-203ENST00000434325 1383 ntAPPRIS P1 TSL 1 (best) BASIC27.17■■□□□ 1.94
TNRC6AQ8NDV7 FAM149A-205ENST00000502970 1990 ntAPPRIS P2 TSL 5 BASIC27.16■■□□□ 1.94
TNRC6AQ8NDV7 AC116565.1-201ENST00000610212 2421 ntAPPRIS P1 BASIC27.12■■□□□ 1.93
TNRC6AQ8NDV7 LINC01578-204ENST00000554894 556 ntTSL 3 BASIC27.09■■□□□ 1.93
TNRC6AQ8NDV7 LINC01578-207ENST00000556895 802 ntTSL 2 BASIC27.09■■□□□ 1.93
TNRC6AQ8NDV7 NRGN-202ENST00000412681 1106 ntAPPRIS P1 TSL 1 (best) BASIC27.09■■□□□ 1.93
Retrieved 100 of 98,524 protein–RNA pairs in 11.6 ms