Protein–RNA interactions for Protein: Q8IYJ1

CPNE9, Copine-9, humanhuman

Predictions only

Length 553 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE9Q8IYJ1 TRIOBP-205ENST00000407319 2125 ntAPPRIS P3 TSL 1 (best) BASIC26.85■■□□□ 1.89
CPNE9Q8IYJ1 PANK2-207ENST00000610179 1807 ntAPPRIS ALT2 TSL 1 (best) BASIC26.84■■□□□ 1.89
CPNE9Q8IYJ1 CBX4-202ENST00000448310 718 ntAPPRIS ALT2 TSL 3 BASIC26.84■■□□□ 1.89
CPNE9Q8IYJ1 AC025431.1-201ENST00000559684 874 ntTSL 3 BASIC26.84■■□□□ 1.89
CPNE9Q8IYJ1 ARMC10-211ENST00000541300 2266 ntTSL 1 (best) BASIC26.84■■□□□ 1.89
CPNE9Q8IYJ1 KLF16-203ENST00000592313 508 ntTSL 3 BASIC26.83■■□□□ 1.89
CPNE9Q8IYJ1 CDKN2D-202ENST00000393599 1422 ntAPPRIS P1 TSL 1 (best) BASIC26.82■■□□□ 1.88
CPNE9Q8IYJ1 FTCD-202ENST00000397743 1834 ntTSL 1 (best) BASIC26.81■■□□□ 1.88
CPNE9Q8IYJ1 KLHL35-204ENST00000539798 1936 ntAPPRIS P1 TSL 1 (best) BASIC26.8■■□□□ 1.88
CPNE9Q8IYJ1 AGAP3-211ENST00000473312 2039 ntTSL 1 (best) BASIC26.8■■□□□ 1.88
CPNE9Q8IYJ1 MBOAT7-202ENST00000338624 2076 ntTSL 2 BASIC26.8■■□□□ 1.88
CPNE9Q8IYJ1 ZBTB12-201ENST00000375527 1875 ntAPPRIS P1 TSL 1 (best) BASIC26.79■■□□□ 1.88
CPNE9Q8IYJ1 PHF23-201ENST00000320316 2037 ntAPPRIS P1 TSL 1 (best) BASIC26.78■■□□□ 1.88
CPNE9Q8IYJ1 SH3BP2-221ENST00000511747 2351 ntAPPRIS P3 TSL 1 (best) BASIC26.78■■□□□ 1.88
CPNE9Q8IYJ1 CGREF1-202ENST00000312734 1610 ntAPPRIS P2 TSL 5 BASIC26.77■■□□□ 1.88
CPNE9Q8IYJ1 ADNP-AS1-201ENST00000558899 927 ntTSL 3 BASIC26.76■■□□□ 1.87
CPNE9Q8IYJ1 AC079305.1-201ENST00000428541 499 ntTSL 3 BASIC26.75■■□□□ 1.87
CPNE9Q8IYJ1 MAPK12-201ENST00000215659 1918 ntAPPRIS P1 TSL 1 (best) BASIC26.72■■□□□ 1.87
CPNE9Q8IYJ1 CHMP4B-201ENST00000217402 1646 ntAPPRIS P1 TSL 1 (best) BASIC26.72■■□□□ 1.87
CPNE9Q8IYJ1 COL13A1-212ENST00000520133 1833 ntTSL 5 BASIC26.71■■□□□ 1.87
CPNE9Q8IYJ1 FADS3-201ENST00000278829 1779 ntAPPRIS P1 TSL 1 (best) BASIC26.71■■□□□ 1.87
CPNE9Q8IYJ1 NRXN1-228ENST00000628364 2444 ntTSL 5 BASIC26.69■■□□□ 1.86
CPNE9Q8IYJ1 TP53I13-201ENST00000301057 1530 ntAPPRIS P2 TSL 1 (best) BASIC26.69■■□□□ 1.86
CPNE9Q8IYJ1 ACTR3B-202ENST00000377776 1566 ntTSL 1 (best) BASIC26.67■■□□□ 1.86
CPNE9Q8IYJ1 FSD1L-204ENST00000469022 1836 ntTSL 1 (best) BASIC26.67■■□□□ 1.86
CPNE9Q8IYJ1 AL133380.1-201ENST00000506013 324 ntBASIC26.66■■□□□ 1.86
CPNE9Q8IYJ1 RARRES2P7-201ENST00000567349 469 ntBASIC26.65■■□□□ 1.86
CPNE9Q8IYJ1 AC009133.5-201ENST00000562594 473 ntTSL 4 BASIC26.63■■□□□ 1.85
CPNE9Q8IYJ1 FAAP20-204ENST00000400919 1413 ntTSL 3 BASIC26.63■■□□□ 1.85
CPNE9Q8IYJ1 HDAC3-201ENST00000305264 1959 ntAPPRIS P1 TSL 1 (best) BASIC26.61■■□□□ 1.85
CPNE9Q8IYJ1 SSBP4-202ENST00000348495 1721 ntAPPRIS ALT1 TSL 2 BASIC26.61■■□□□ 1.85
CPNE9Q8IYJ1 TPRA1-201ENST00000296210 1725 ntTSL 1 (best) BASIC26.59■■□□□ 1.85
CPNE9Q8IYJ1 ANGPTL6-201ENST00000253109 1900 ntAPPRIS P1 TSL 1 (best) BASIC26.59■■□□□ 1.85
CPNE9Q8IYJ1 MLST8-203ENST00000397124 1691 ntAPPRIS P3 TSL 5 BASIC26.58■■□□□ 1.85
CPNE9Q8IYJ1 IL13RA1-201ENST00000371642 1096 ntTSL 1 (best) BASIC26.58■■□□□ 1.85
CPNE9Q8IYJ1 HOXD8-201ENST00000313173 1917 ntAPPRIS P3 TSL 2 BASIC26.58■■□□□ 1.85
CPNE9Q8IYJ1 LFNG-203ENST00000359574 1377 ntAPPRIS ALT1 TSL 1 (best) BASIC26.58■■□□□ 1.84
CPNE9Q8IYJ1 SNX24-201ENST00000261369 2158 ntAPPRIS P1 TSL 1 (best) BASIC26.57■■□□□ 1.84
CPNE9Q8IYJ1 AL161658.1-201ENST00000623641 1967 ntBASIC26.57■■□□□ 1.84
CPNE9Q8IYJ1 MBOAT7-203ENST00000391754 1797 ntTSL 1 (best) BASIC26.56■■□□□ 1.84
CPNE9Q8IYJ1 ABHD17A-201ENST00000250974 1630 ntTSL 1 (best) BASIC26.55■■□□□ 1.84
CPNE9Q8IYJ1 ATPAF1-201ENST00000329231 1241 ntTSL 2 BASIC26.55■■□□□ 1.84
CPNE9Q8IYJ1 SETD8P1-201ENST00000623146 1180 ntBASIC26.55■■□□□ 1.84
CPNE9Q8IYJ1 FTCD-204ENST00000397748 1955 ntTSL 1 (best) BASIC26.55■■□□□ 1.84
CPNE9Q8IYJ1 TXN-202ENST00000374517 869 ntAPPRIS P1 TSL 1 (best) BASIC26.54■■□□□ 1.84
CPNE9Q8IYJ1 WASH5P-204ENST00000632292 975 ntBASIC26.53■■□□□ 1.84
CPNE9Q8IYJ1 LRRC10B-201ENST00000378075 2219 ntAPPRIS P1 BASIC26.52■■□□□ 1.84
CPNE9Q8IYJ1 ATRNL1-207ENST00000527407 1583 ntTSL 5 BASIC26.52■■□□□ 1.84
CPNE9Q8IYJ1 CNIH2-203ENST00000528852 1524 ntAPPRIS ALT1 TSL 1 (best) BASIC26.52■■□□□ 1.84
CPNE9Q8IYJ1 HOXB3-211ENST00000490677 1109 ntTSL 1 (best) BASIC26.51■■□□□ 1.83
CPNE9Q8IYJ1 UCK1-201ENST00000372208 2063 ntTSL 1 (best) BASIC26.51■■□□□ 1.83
CPNE9Q8IYJ1 HNRNPAB-206ENST00000506339 1747 ntAPPRIS ALT2 TSL 5 BASIC26.51■■□□□ 1.83
CPNE9Q8IYJ1 MSX1-201ENST00000382723 1939 ntAPPRIS P1 TSL 1 (best) BASIC26.49■■□□□ 1.83
CPNE9Q8IYJ1 HOXB3-210ENST00000489475 1845 ntTSL 2 BASIC26.49■■□□□ 1.83
CPNE9Q8IYJ1 RNF150-204ENST00000507500 1530 ntTSL 1 (best) BASIC26.49■■□□□ 1.83
CPNE9Q8IYJ1 HMX1-201ENST00000400677 1895 ntAPPRIS P1 TSL 1 (best) BASIC26.49■■□□□ 1.83
CPNE9Q8IYJ1 LGALS3-201ENST00000254301 1146 ntAPPRIS P1 TSL 1 (best) BASIC26.48■■□□□ 1.83
CPNE9Q8IYJ1 C1orf122-204ENST00000468084 1234 ntAPPRIS ALT2 TSL 2 BASIC26.48■■□□□ 1.83
CPNE9Q8IYJ1 PI4KAP2-202ENST00000450651 2294 ntTSL 5 BASIC26.48■■□□□ 1.83
CPNE9Q8IYJ1 GLTP-201ENST00000318348 2356 ntAPPRIS P1 TSL 1 (best) BASIC26.47■■□□□ 1.83
CPNE9Q8IYJ1 TPM2-203ENST00000378292 2147 ntAPPRIS ALT1 TSL 1 (best) BASIC26.47■■□□□ 1.83
CPNE9Q8IYJ1 ABHD12-201ENST00000339157 2117 ntAPPRIS P1 TSL 2 BASIC26.46■■□□□ 1.83
CPNE9Q8IYJ1 KCNQ5-204ENST00000370392 1469 ntTSL 1 (best) BASIC26.46■■□□□ 1.83
CPNE9Q8IYJ1 SIGMAR1-205ENST00000477726 840 ntTSL 1 (best) BASIC26.44■■□□□ 1.82
CPNE9Q8IYJ1 ABCB10P1-201ENST00000614297 2181 ntBASIC26.43■■□□□ 1.82
CPNE9Q8IYJ1 GXYLT1-201ENST00000280876 1937 ntAPPRIS ALT2 TSL 1 (best) BASIC26.43■■□□□ 1.82
CPNE9Q8IYJ1 TSPAN11-203ENST00000545802 1649 ntTSL 1 (best) BASIC26.42■■□□□ 1.82
CPNE9Q8IYJ1 PI4KAP1-202ENST00000611748 1906 ntTSL 1 (best) BASIC26.41■■□□□ 1.82
CPNE9Q8IYJ1 AUTS2-202ENST00000403018 957 ntTSL 1 (best) BASIC26.41■■□□□ 1.82
CPNE9Q8IYJ1 HES7-202ENST00000541682 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC26.41■■□□□ 1.82
CPNE9Q8IYJ1 TCEA2-204ENST00000395053 1733 ntTSL 1 (best) BASIC26.4■■□□□ 1.82
CPNE9Q8IYJ1 AL109917.1-201ENST00000412228 906 ntTSL 2 BASIC26.4■■□□□ 1.82
CPNE9Q8IYJ1 GALK1-205ENST00000588479 1866 ntAPPRIS P1 TSL 1 (best) BASIC26.4■■□□□ 1.82
CPNE9Q8IYJ1 PCBD2-201ENST00000254908 1223 ntAPPRIS P1 TSL 1 (best) BASIC26.38■■□□□ 1.81
CPNE9Q8IYJ1 CHPT1-205ENST00000549872 2001 ntAPPRIS ALT2 TSL 5 BASIC26.38■■□□□ 1.81
CPNE9Q8IYJ1 AC068152.1-210ENST00000574741 836 ntTSL 3 BASIC26.37■■□□□ 1.81
CPNE9Q8IYJ1 TMEM158-201ENST00000503771 1813 ntAPPRIS P1 BASIC26.37■■□□□ 1.81
CPNE9Q8IYJ1 SH3GL3-202ENST00000427482 1806 ntAPPRIS P1 TSL 1 (best) BASIC26.36■■□□□ 1.81
CPNE9Q8IYJ1 LRRC61-202ENST00000359623 1877 ntAPPRIS P1 TSL 2 BASIC26.35■■□□□ 1.81
CPNE9Q8IYJ1 AGAP3-216ENST00000479901 1881 ntTSL 5 BASIC26.33■■□□□ 1.81
CPNE9Q8IYJ1 PGM5-201ENST00000396392 1782 ntTSL 1 (best) BASIC26.33■■□□□ 1.8
CPNE9Q8IYJ1 COL13A1-210ENST00000517713 2007 ntAPPRIS ALT2 TSL 5 BASIC26.32■■□□□ 1.8
CPNE9Q8IYJ1 INPP5A-202ENST00000368593 1432 ntTSL 1 (best) BASIC26.32■■□□□ 1.8
CPNE9Q8IYJ1 CCNYL1-205ENST00000420822 952 ntTSL 1 (best) BASIC26.32■■□□□ 1.8
CPNE9Q8IYJ1 INAFM1-201ENST00000552360 1255 ntAPPRIS P1 BASIC26.32■■□□□ 1.8
CPNE9Q8IYJ1 AC136428.2-201ENST00000563187 214 ntBASIC26.32■■□□□ 1.8
CPNE9Q8IYJ1 GNPTAB-202ENST00000392919 760 ntTSL 1 (best) BASIC26.31■■□□□ 1.8
CPNE9Q8IYJ1 SLC9A3R2-202ENST00000432365 1564 ntTSL 1 (best) BASIC26.31■■□□□ 1.8
CPNE9Q8IYJ1 AVEN-201ENST00000306730 1605 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
CPNE9Q8IYJ1 RHOC-208ENST00000369642 1355 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
CPNE9Q8IYJ1 FOXA2-202ENST00000419308 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC26.3■■□□□ 1.8
CPNE9Q8IYJ1 JMJD8-216ENST00000609261 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC26.3■■□□□ 1.8
CPNE9Q8IYJ1 PCYT2-206ENST00000571105 1628 ntTSL 5 BASIC26.3■■□□□ 1.8
CPNE9Q8IYJ1 LRRC75B-201ENST00000318753 1238 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
CPNE9Q8IYJ1 AC097358.2-201ENST00000607541 1159 ntBASIC26.3■■□□□ 1.8
CPNE9Q8IYJ1 PXDC1-202ENST00000380283 2190 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
CPNE9Q8IYJ1 GLRX5-201ENST00000331334 1564 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
CPNE9Q8IYJ1 CGREF1-204ENST00000402550 1575 ntTSL 2 BASIC26.29■■□□□ 1.8
CPNE9Q8IYJ1 HOXD-AS2-202ENST00000440016 999 ntTSL 5 BASIC26.28■■□□□ 1.8
CPNE9Q8IYJ1 NADK2-210ENST00000514504 1233 ntTSL 5 BASIC26.28■■□□□ 1.8
Retrieved 100 of 98,524 protein–RNA pairs in 22.5 ms