Protein–RNA interactions for Protein: Q8IYJ1

CPNE9, Copine-9, humanhuman

Predictions only

Length 553 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE9Q8IYJ1 FBLL1-201ENST00000338333 1519 ntAPPRIS P1 BASIC33.38■■■□□ 2.93
CPNE9Q8IYJ1 TCF15-201ENST00000246080 1555 ntAPPRIS P1 TSL 1 (best) BASIC33.23■■■□□ 2.91
CPNE9Q8IYJ1 AL356512.1-201ENST00000607453 1739 ntBASIC32.71■■■□□ 2.83
CPNE9Q8IYJ1 CSNK1E-204ENST00000403904 1580 ntAPPRIS P1 TSL 5 BASIC32.61■■■□□ 2.81
CPNE9Q8IYJ1 HES6-203ENST00000409160 1600 ntTSL 2 BASIC32.4■■■□□ 2.78
CPNE9Q8IYJ1 AES-202ENST00000327141 1608 ntAPPRIS P1 TSL 1 (best) BASIC32.35■■■□□ 2.77
CPNE9Q8IYJ1 SEPT3-204ENST00000406029 1866 ntTSL 5 BASIC32.23■■■□□ 2.75
CPNE9Q8IYJ1 PPP1CA-203ENST00000376745 1476 ntAPPRIS P1 TSL 1 (best) BASIC32.21■■■□□ 2.75
CPNE9Q8IYJ1 PRR5-217ENST00000617066 1726 ntTSL 5 BASIC32.12■■■□□ 2.73
CPNE9Q8IYJ1 PRR5-216ENST00000611394 1843 ntTSL 2 BASIC31.81■■■□□ 2.68
CPNE9Q8IYJ1 PHF10-201ENST00000339209 1719 ntAPPRIS P4 TSL 1 (best) BASIC31.8■■■□□ 2.68
CPNE9Q8IYJ1 SSSCA1-205ENST00000527920 806 ntTSL 3 BASIC31.68■■■□□ 2.66
CPNE9Q8IYJ1 AC116565.1-201ENST00000610212 2421 ntAPPRIS P1 BASIC31.49■■■□□ 2.63
CPNE9Q8IYJ1 PTF1A-201ENST00000376504 1537 ntAPPRIS P1 TSL 1 (best) BASIC31.34■■■□□ 2.61
CPNE9Q8IYJ1 ZFYVE21-201ENST00000216602 1521 ntAPPRIS ALT2 TSL 2 BASIC31.24■■■□□ 2.59
CPNE9Q8IYJ1 HRAS-203ENST00000397596 1100 ntAPPRIS P1 TSL 3 BASIC31■■■□□ 2.55
CPNE9Q8IYJ1 FAM149A-205ENST00000502970 1990 ntAPPRIS P2 TSL 5 BASIC30.91■■■□□ 2.54
CPNE9Q8IYJ1 NECTIN3-201ENST00000319792 1549 ntAPPRIS ALT2 TSL 1 (best) BASIC30.91■■■□□ 2.54
CPNE9Q8IYJ1 CYHR1-209ENST00000530374 1870 ntTSL 3 BASIC30.83■■■□□ 2.53
CPNE9Q8IYJ1 OLFM1-208ENST00000392991 1057 ntTSL 2 BASIC30.8■■■□□ 2.52
CPNE9Q8IYJ1 RAB12-201ENST00000329286 2137 ntAPPRIS P1 TSL 1 (best) BASIC30.77■■■□□ 2.52
CPNE9Q8IYJ1 MPND-201ENST00000262966 1567 ntAPPRIS P3 TSL 1 (best) BASIC30.68■■■□□ 2.5
CPNE9Q8IYJ1 ZNF358-202ENST00000597229 1954 ntAPPRIS P1 TSL 2 BASIC30.64■■■□□ 2.5
CPNE9Q8IYJ1 GIPC1-205ENST00000586027 1386 ntAPPRIS P1 TSL 2 BASIC30.63■■■□□ 2.49
CPNE9Q8IYJ1 FOXD1-202ENST00000615637 2272 ntAPPRIS P1 BASIC30.58■■■□□ 2.49
CPNE9Q8IYJ1 TAF5L-202ENST00000366674 492 ntTSL 3 BASIC30.58■■■□□ 2.49
CPNE9Q8IYJ1 CAPNS1-206ENST00000588815 1471 ntAPPRIS P2 TSL 1 (best) BASIC30.57■■■□□ 2.48
CPNE9Q8IYJ1 ANKRD60-201ENST00000457363 1038 ntAPPRIS P1 TSL 5 BASIC30.54■■■□□ 2.48
CPNE9Q8IYJ1 NT5DC2-203ENST00000459839 1639 ntTSL 1 (best) BASIC30.45■■■□□ 2.47
CPNE9Q8IYJ1 SLC25A28-201ENST00000370495 1451 ntAPPRIS P1 TSL 1 (best) BASIC30.33■■■□□ 2.45
CPNE9Q8IYJ1 FBRSL1-201ENST00000434748 5568 ntAPPRIS P2 TSL 1 (best) BASIC30.29■■■□□ 2.44
CPNE9Q8IYJ1 PPP2CB-201ENST00000221138 2006 ntAPPRIS P1 TSL 1 (best) BASIC30.28■■■□□ 2.44
CPNE9Q8IYJ1 MPND-207ENST00000599840 1611 ntAPPRIS ALT2 TSL 5 BASIC30.26■■■□□ 2.44
CPNE9Q8IYJ1 PPP2CB-204ENST00000518564 691 ntTSL 3 BASIC30.26■■■□□ 2.43
CPNE9Q8IYJ1 TRIP10-202ENST00000313285 2035 ntAPPRIS P1 TSL 1 (best) BASIC30.22■■■□□ 2.43
CPNE9Q8IYJ1 FAM149A-215ENST00000514153 2070 ntAPPRIS P2 TSL 5 BASIC30.21■■■□□ 2.43
CPNE9Q8IYJ1 CCM2-219ENST00000544363 1620 ntTSL 3 BASIC30.04■■■□□ 2.4
CPNE9Q8IYJ1 ACOT7-209ENST00000545482 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC30.02■■■□□ 2.4
CPNE9Q8IYJ1 METRNL-201ENST00000320095 1605 ntAPPRIS P1 TSL 1 (best) BASIC30.01■■■□□ 2.39
CPNE9Q8IYJ1 TGIF1-202ENST00000343820 2076 ntAPPRIS P1 TSL 1 (best) BASIC29.97■■■□□ 2.39
CPNE9Q8IYJ1 UBE2M-201ENST00000253023 1508 ntAPPRIS P1 TSL 1 (best) BASIC29.91■■■□□ 2.38
CPNE9Q8IYJ1 CSNK1E-206ENST00000413574 1631 ntTSL 5 BASIC29.88■■■□□ 2.37
CPNE9Q8IYJ1 KHSRP-213ENST00000619396 2226 ntAPPRIS ALT2 TSL 5 BASIC29.63■■■□□ 2.33
CPNE9Q8IYJ1 NT5DC2-202ENST00000422318 1795 ntAPPRIS ALT2 TSL 5 BASIC29.62■■■□□ 2.33
CPNE9Q8IYJ1 PWWP2B-202ENST00000631148 2013 ntTSL 5 BASIC29.6■■■□□ 2.33
CPNE9Q8IYJ1 CMTM4-202ENST00000394106 1187 ntAPPRIS P1 TSL 1 (best) BASIC29.58■■■□□ 2.33
CPNE9Q8IYJ1 CMTM4-204ENST00000563952 1023 ntTSL 1 (best) BASIC29.58■■■□□ 2.33
CPNE9Q8IYJ1 NKAIN4-203ENST00000370316 1430 ntAPPRIS P1 TSL 1 (best) BASIC29.57■■■□□ 2.32
CPNE9Q8IYJ1 GALR3-201ENST00000249041 1157 ntAPPRIS P1 TSL 1 (best) BASIC29.56■■■□□ 2.32
CPNE9Q8IYJ1 INO80B-201ENST00000233331 1261 ntAPPRIS P1 TSL 1 (best) BASIC29.54■■■□□ 2.32
CPNE9Q8IYJ1 C11orf63-202ENST00000307257 1964 ntTSL 2 BASIC29.53■■■□□ 2.32
CPNE9Q8IYJ1 C11orf68-202ENST00000449692 1559 ntAPPRIS P3 TSL 1 (best) BASIC29.47■■■□□ 2.31
CPNE9Q8IYJ1 B4GALT2-203ENST00000372324 2203 ntAPPRIS P1 TSL 1 (best) BASIC29.46■■■□□ 2.31
CPNE9Q8IYJ1 CDV3-203ENST00000431519 955 ntTSL 1 (best) BASIC29.43■■■□□ 2.3
CPNE9Q8IYJ1 PABPN1-201ENST00000216727 2001 ntAPPRIS P2 TSL 1 (best) BASIC29.43■■■□□ 2.3
CPNE9Q8IYJ1 AL357033.3-201ENST00000620143 614 ntTSL 3 BASIC29.4■■■□□ 2.3
CPNE9Q8IYJ1 ILK-212ENST00000532063 1617 ntTSL 2 BASIC29.38■■■□□ 2.29
CPNE9Q8IYJ1 CACNG8-202ENST00000638874 1278 ntAPPRIS P2 TSL 1 (best) BASIC29.37■■■□□ 2.29
CPNE9Q8IYJ1 INO80B-203ENST00000409917 796 ntTSL 2 BASIC29.36■■■□□ 2.29
CPNE9Q8IYJ1 INO80B-WBP1-202ENST00000452361 2040 ntAPPRIS P5 TSL 2 BASIC29.36■■■□□ 2.29
CPNE9Q8IYJ1 HAPLN2-201ENST00000255039 1771 ntAPPRIS P1 TSL 1 (best) BASIC29.33■■■□□ 2.29
CPNE9Q8IYJ1 MAPK3-201ENST00000263025 1861 ntAPPRIS P3 TSL 1 (best) BASIC29.29■■■□□ 2.28
CPNE9Q8IYJ1 NT5M-207ENST00000616989 1635 ntTSL 1 (best) BASIC29.22■■■□□ 2.27
CPNE9Q8IYJ1 LMO2-202ENST00000395833 1687 ntAPPRIS P1 TSL 1 (best) BASIC29.14■■■□□ 2.26
CPNE9Q8IYJ1 CRIP2-201ENST00000329146 1857 ntAPPRIS P1 TSL 1 (best) BASIC29.13■■■□□ 2.25
CPNE9Q8IYJ1 RAN-202ENST00000392369 1530 ntAPPRIS P1 TSL 1 (best) BASIC29.13■■■□□ 2.25
CPNE9Q8IYJ1 MAPK3-202ENST00000322266 1743 ntTSL 5 BASIC29.11■■■□□ 2.25
CPNE9Q8IYJ1 FAM89B-203ENST00000530349 1263 ntAPPRIS P1 TSL 2 BASIC29.11■■■□□ 2.25
CPNE9Q8IYJ1 FEZF2-203ENST00000486811 2001 ntAPPRIS P1 TSL 5 BASIC29.08■■■□□ 2.25
CPNE9Q8IYJ1 AC015813.7-201ENST00000623294 581 ntBASIC29.05■■■□□ 2.24
CPNE9Q8IYJ1 C11orf84-201ENST00000294244 2024 ntAPPRIS P1 TSL 1 (best) BASIC29.04■■■□□ 2.24
CPNE9Q8IYJ1 SLC25A10-203ENST00000545862 1911 ntTSL 1 (best) BASIC28.98■■■□□ 2.23
CPNE9Q8IYJ1 LIMCH1-211ENST00000509638 1570 ntTSL 1 (best) BASIC28.96■■■□□ 2.23
CPNE9Q8IYJ1 KIAA2013-203ENST00000616327 2170 ntAPPRIS P1 TSL 5 BASIC28.95■■■□□ 2.22
CPNE9Q8IYJ1 ECHS1-201ENST00000368547 1617 ntAPPRIS P1 TSL 1 (best) BASIC28.94■■■□□ 2.22
CPNE9Q8IYJ1 HAGHL-201ENST00000341413 1701 ntTSL 2 BASIC28.91■■■□□ 2.22
CPNE9Q8IYJ1 AL136373.1-201ENST00000634804 1449 ntAPPRIS P1 BASIC28.85■■■□□ 2.21
CPNE9Q8IYJ1 CTDNEP1-208ENST00000573600 1724 ntAPPRIS P1 TSL 5 BASIC28.81■■■□□ 2.2
CPNE9Q8IYJ1 Z97634.1-201ENST00000412293 1715 ntTSL 1 (best) BASIC28.77■■■□□ 2.2
CPNE9Q8IYJ1 AGAP1-204ENST00000409457 2165 ntTSL 1 (best) BASIC28.76■■■□□ 2.19
CPNE9Q8IYJ1 HOXB3-208ENST00000476342 1420 ntAPPRIS P1 TSL 1 (best) BASIC28.76■■■□□ 2.19
CPNE9Q8IYJ1 CSNK1E-205ENST00000405675 2127 ntTSL 5 BASIC28.73■■■□□ 2.19
CPNE9Q8IYJ1 ADRA1D-201ENST00000379453 2728 ntAPPRIS P1 TSL 1 (best) BASIC28.72■■■□□ 2.19
CPNE9Q8IYJ1 SATB1-AS1-216ENST00000598149 1119 ntTSL 2 BASIC28.71■■■□□ 2.19
CPNE9Q8IYJ1 GPI-201ENST00000356487 2210 ntAPPRIS P1 TSL 1 (best) BASIC28.7■■■□□ 2.18
CPNE9Q8IYJ1 SSBP3-204ENST00000371320 2077 ntAPPRIS P3 TSL 1 (best) BASIC28.69■■■□□ 2.18
CPNE9Q8IYJ1 TPRG1L-201ENST00000344579 2189 ntTSL 1 (best) BASIC28.69■■■□□ 2.18
CPNE9Q8IYJ1 AC008738.5-201ENST00000587312 482 ntTSL 3 BASIC28.64■■■□□ 2.18
CPNE9Q8IYJ1 AC145285.7-201ENST00000614819 1539 ntBASIC28.64■■■□□ 2.17
CPNE9Q8IYJ1 FAM89B-202ENST00000449319 1337 ntTSL 1 (best) BASIC28.62■■■□□ 2.17
CPNE9Q8IYJ1 CHCHD4-202ENST00000396914 1405 ntAPPRIS P1 TSL 1 (best) BASIC28.59■■■□□ 2.17
CPNE9Q8IYJ1 IFNGR2-201ENST00000290219 2221 ntAPPRIS P3 TSL 1 (best) BASIC28.57■■■□□ 2.16
CPNE9Q8IYJ1 FAM19A5-203ENST00000402357 1508 ntTSL 1 (best) BASIC28.57■■■□□ 2.16
CPNE9Q8IYJ1 GRASP-206ENST00000552049 1688 ntTSL 1 (best) BASIC28.57■■■□□ 2.16
CPNE9Q8IYJ1 NT5M-201ENST00000389022 1617 ntAPPRIS P1 TSL 1 (best) BASIC28.51■■■□□ 2.15
CPNE9Q8IYJ1 DRD4-201ENST00000176183 1375 ntAPPRIS P1 TSL 1 (best) BASIC28.5■■■□□ 2.15
CPNE9Q8IYJ1 RAB43-207ENST00000476465 1627 ntTSL 3 BASIC28.45■■■□□ 2.14
CPNE9Q8IYJ1 ALYREF-202ENST00000505490 1088 ntAPPRIS P1 TSL 1 (best) BASIC28.45■■■□□ 2.14
CPNE9Q8IYJ1 ADRA2C-201ENST00000330055 2129 ntAPPRIS P1 BASIC28.45■■■□□ 2.14
CPNE9Q8IYJ1 CYBA-201ENST00000261623 797 ntAPPRIS P1 TSL 1 (best) BASIC28.42■■■□□ 2.14
Retrieved 100 of 98,524 protein–RNA pairs in 24.5 ms