Protein–RNA interactions for Protein: O60880

SH2D1A, SH2 domain-containing protein 1A, humanhuman

Predictions only

Length 128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SH2D1AO60880 SPIRE1-202ENST00000409402 5665 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
SH2D1AO60880 PHOX2A-201ENST00000298231 1699 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
SH2D1AO60880 RASSF7-201ENST00000397582 1731 ntAPPRIS ALT2 TSL 2 BASIC20.3■□□□□ 0.84
SH2D1AO60880 COL13A1-210ENST00000517713 2007 ntAPPRIS ALT2 TSL 5 BASIC20.29■□□□□ 0.84
SH2D1AO60880 MBD2-201ENST00000256429 5188 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
SH2D1AO60880 GIPC1-203ENST00000393033 1926 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
SH2D1AO60880 TMEM158-201ENST00000503771 1813 ntAPPRIS P1 BASIC20.26■□□□□ 0.83
SH2D1AO60880 AC008738.5-201ENST00000587312 482 ntTSL 3 BASIC20.26■□□□□ 0.83
SH2D1AO60880 AC139426.1-201ENST00000568218 2529 ntBASIC20.25■□□□□ 0.83
SH2D1AO60880 GXYLT1-201ENST00000280876 1937 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
SH2D1AO60880 FTCD-202ENST00000397743 1834 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
SH2D1AO60880 KCTD17-202ENST00000403888 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
SH2D1AO60880 ADGRB2-204ENST00000398542 5176 ntTSL 5 BASIC20.23■□□□□ 0.83
SH2D1AO60880 TPRA1-209ENST00000489960 1903 ntAPPRIS P1 TSL 5 BASIC20.23■□□□□ 0.83
SH2D1AO60880 EXOC3-209ENST00000512944 2825 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
SH2D1AO60880 HNRNPAB-207ENST00000514633 1571 ntAPPRIS ALT2 TSL 5 BASIC20.22■□□□□ 0.83
SH2D1AO60880 FZD2-201ENST00000315323 2112 ntAPPRIS P1 BASIC20.22■□□□□ 0.83
SH2D1AO60880 FBXO2-201ENST00000354287 1560 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
SH2D1AO60880 CUL4A-202ENST00000375440 2364 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
SH2D1AO60880 MVK-208ENST00000539696 608 ntTSL 5 BASIC20.2■□□□□ 0.82
SH2D1AO60880 MBOAT7-203ENST00000391754 1797 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
SH2D1AO60880 SIRT3-201ENST00000382743 2543 ntAPPRIS P2 TSL 1 (best) BASIC20.2■□□□□ 0.82
SH2D1AO60880 CAPNS1-201ENST00000246533 1918 ntAPPRIS P2 TSL 1 (best) BASIC20.19■□□□□ 0.82
SH2D1AO60880 HMX1-201ENST00000400677 1895 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
SH2D1AO60880 MAPK4-202ENST00000540640 1576 ntTSL 2 BASIC20.18■□□□□ 0.82
SH2D1AO60880 VWA1-201ENST00000338660 2147 ntTSL 2 BASIC20.18■□□□□ 0.82
SH2D1AO60880 AMN-201ENST00000299155 1907 ntAPPRIS P2 TSL 1 (best) BASIC20.17■□□□□ 0.82
SH2D1AO60880 FOXG1-201ENST00000313071 4890 ntAPPRIS P1 BASIC20.17■□□□□ 0.82
SH2D1AO60880 ZNF513-201ENST00000323703 2139 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
SH2D1AO60880 ZBTB10-204ENST00000455036 5458 ntAPPRIS P3 TSL 2 BASIC20.17■□□□□ 0.82
SH2D1AO60880 CTDNEP1-201ENST00000318988 1549 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
SH2D1AO60880 SH3GL3-202ENST00000427482 1806 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
SH2D1AO60880 EMC10-202ENST00000376918 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
SH2D1AO60880 PI4KAP1-202ENST00000611748 1906 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
SH2D1AO60880 GIPC1-201ENST00000345425 1782 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
SH2D1AO60880 ZIC2-201ENST00000376335 2983 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
SH2D1AO60880 CCND3-203ENST00000372991 2085 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
SH2D1AO60880 SECTM1-201ENST00000269389 2235 ntAPPRIS P2 TSL 1 (best) BASIC20.12■□□□□ 0.81
SH2D1AO60880 MSANTD3-203ENST00000395067 1362 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
SH2D1AO60880 WDSUB1-205ENST00000409990 1920 ntAPPRIS P1 TSL 2 BASIC20.12■□□□□ 0.81
SH2D1AO60880 TSPAN33-201ENST00000486685 1863 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
SH2D1AO60880 MLST8-203ENST00000397124 1691 ntAPPRIS P3 TSL 5 BASIC20.12■□□□□ 0.81
SH2D1AO60880 PQLC1-203ENST00000397778 2555 ntAPPRIS P3 TSL 1 (best) BASIC20.12■□□□□ 0.81
SH2D1AO60880 SYNGR1-202ENST00000318801 1361 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
SH2D1AO60880 COPS6-201ENST00000303904 1432 ntAPPRIS P2 TSL 1 (best) BASIC20.1■□□□□ 0.81
SH2D1AO60880 AGFG1-205ENST00000409979 2089 ntAPPRIS ALT1 TSL 5 BASIC20.09■□□□□ 0.81
SH2D1AO60880 LDB1-202ENST00000425280 2089 ntTSL 5 BASIC20.09■□□□□ 0.81
SH2D1AO60880 LINC01578-203ENST00000554669 578 ntTSL 5 BASIC20.09■□□□□ 0.81
SH2D1AO60880 GRK2-204ENST00000526285 1458 ntTSL 5 BASIC20.08■□□□□ 0.81
SH2D1AO60880 RNF130-201ENST00000261947 1766 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
SH2D1AO60880 ST7-AS1-201ENST00000456775 1889 ntBASIC20.07■□□□□ 0.8
SH2D1AO60880 CCDC88C-205ENST00000553403 1651 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
SH2D1AO60880 ARPC5L-202ENST00000353214 2507 ntAPPRIS P1 TSL 2 BASIC20.07■□□□□ 0.8
SH2D1AO60880 PLPP2-203ENST00000434325 1383 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
SH2D1AO60880 RTN4R-201ENST00000043402 2157 ntAPPRIS P2 TSL 1 (best) BASIC20.07■□□□□ 0.8
SH2D1AO60880 MAGI2-211ENST00000535697 6146 ntTSL 5 BASIC20.06■□□□□ 0.8
SH2D1AO60880 CERS2-205ENST00000368954 2505 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
SH2D1AO60880 ARL8A-201ENST00000272217 1793 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
SH2D1AO60880 CHCHD4-201ENST00000295767 1603 ntTSL 2 BASIC20.05■□□□□ 0.8
SH2D1AO60880 NEUROG2-201ENST00000313341 2287 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
SH2D1AO60880 ITGA9-203ENST00000422441 2282 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
SH2D1AO60880 SMARCD3-201ENST00000262188 1993 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
SH2D1AO60880 HOXB3-210ENST00000489475 1845 ntTSL 2 BASIC20.04■□□□□ 0.8
SH2D1AO60880 CHPT1-205ENST00000549872 2001 ntAPPRIS ALT2 TSL 5 BASIC20.02■□□□□ 0.8
SH2D1AO60880 GALK1-205ENST00000588479 1866 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
SH2D1AO60880 FEV-201ENST00000295727 1879 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
SH2D1AO60880 PDPK1-203ENST00000389224 2416 ntTSL 2 BASIC20.01■□□□□ 0.79
SH2D1AO60880 AL161658.1-201ENST00000623641 1967 ntBASIC20.01■□□□□ 0.79
SH2D1AO60880 CNIH2-203ENST00000528852 1524 ntAPPRIS ALT1 TSL 1 (best) BASIC19.99■□□□□ 0.79
SH2D1AO60880 TMEM9-201ENST00000367330 1959 ntAPPRIS P3 TSL 1 (best) BASIC19.99■□□□□ 0.79
SH2D1AO60880 COL13A1-203ENST00000398969 2267 ntAPPRIS ALT2 TSL 5 BASIC19.99■□□□□ 0.79
SH2D1AO60880 AL360182.2-201ENST00000451656 470 ntTSL 3 BASIC19.98■□□□□ 0.79
SH2D1AO60880 FGF2-203ENST00000614010 867 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
SH2D1AO60880 SP8-201ENST00000361443 1714 ntAPPRIS P3 TSL 1 (best) BASIC19.98■□□□□ 0.79
SH2D1AO60880 SIGMAR1-203ENST00000378892 1743 ntTSL 2 BASIC19.98■□□□□ 0.79
SH2D1AO60880 GAL3ST1-205ENST00000406361 1819 ntAPPRIS P1 TSL 2 BASIC19.97■□□□□ 0.79
SH2D1AO60880 FAM117A-201ENST00000240364 2365 ntAPPRIS P2 TSL 1 (best) BASIC19.97■□□□□ 0.79
SH2D1AO60880 AC079848.1-201ENST00000511301 327 ntTSL 3 BASIC19.97■□□□□ 0.79
SH2D1AO60880 AC006077.2-201ENST00000623591 457 ntBASIC19.96■□□□□ 0.79
SH2D1AO60880 FAM89A-201ENST00000366654 1495 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
SH2D1AO60880 MSX1-201ENST00000382723 1939 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
SH2D1AO60880 ARHGAP22-202ENST00000374170 2107 ntTSL 5 BASIC19.96■□□□□ 0.79
SH2D1AO60880 DBP-205ENST00000601104 1489 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
SH2D1AO60880 LINC01578-201ENST00000553829 732 ntTSL 2 BASIC19.95■□□□□ 0.78
SH2D1AO60880 NRGN-201ENST00000284292 1306 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
SH2D1AO60880 PGM5-201ENST00000396392 1782 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
SH2D1AO60880 FOXQ1-201ENST00000296839 2309 ntAPPRIS P1 BASIC19.94■□□□□ 0.78
SH2D1AO60880 TM6SF1-202ENST00000322019 2074 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
SH2D1AO60880 AC243773.2-204ENST00000621428 1462 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
SH2D1AO60880 FAAH-201ENST00000243167 2094 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
SH2D1AO60880 RAB40C-201ENST00000248139 2699 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
SH2D1AO60880 FOXE3-201ENST00000335071 1981 ntAPPRIS P1 BASIC19.92■□□□□ 0.78
SH2D1AO60880 EFNA3-201ENST00000368408 1782 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
SH2D1AO60880 SLC52A2-201ENST00000329994 1896 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
SH2D1AO60880 SH3GL1-202ENST00000417295 1404 ntTSL 2 BASIC19.92■□□□□ 0.78
SH2D1AO60880 RAB26-201ENST00000210187 1675 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
SH2D1AO60880 RUNDC3A-206ENST00000590941 1675 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
SH2D1AO60880 LRRC61-202ENST00000359623 1877 ntAPPRIS P1 TSL 2 BASIC19.9■□□□□ 0.78
SH2D1AO60880 CACNG6-201ENST00000252729 1853 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
SH2D1AO60880 CADPS-215ENST00000490353 2669 ntTSL 5 BASIC19.89■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 8.8 ms