Protein–RNA interactions for Protein: A0A1B0GUT2

LINC00959, HCG1648656, isoform CRA_a, humanhuman

Predictions only

Length 108 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00959A0A1B0GUT2 RNF130-201ENST00000261947 1766 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
LINC00959A0A1B0GUT2 JAG2-201ENST00000331782 5835 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
LINC00959A0A1B0GUT2 RSG1-201ENST00000375599 1545 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
LINC00959A0A1B0GUT2 ARHGEF7-206ENST00000375741 5525 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
LINC00959A0A1B0GUT2 SMARCD3-201ENST00000262188 1993 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
LINC00959A0A1B0GUT2 TMEM268-201ENST00000288502 2314 ntAPPRIS P3 TSL 1 (best) BASIC18.44■□□□□ 0.54
LINC00959A0A1B0GUT2 AP001107.7-201ENST00000533287 272 ntTSL 2 BASIC18.43■□□□□ 0.54
LINC00959A0A1B0GUT2 DBP-205ENST00000601104 1489 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
LINC00959A0A1B0GUT2 AC243773.2-204ENST00000621428 1462 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
LINC00959A0A1B0GUT2 ANKRD13D-211ENST00000511455 2139 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
LINC00959A0A1B0GUT2 HOXD13-201ENST00000392539 2240 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
LINC00959A0A1B0GUT2 CLEC3B-201ENST00000296130 936 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
LINC00959A0A1B0GUT2 AL031258.1-201ENST00000623562 325 ntBASIC18.41■□□□□ 0.54
LINC00959A0A1B0GUT2 MATK-201ENST00000310132 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
LINC00959A0A1B0GUT2 MBOAT7-203ENST00000391754 1797 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
LINC00959A0A1B0GUT2 ABHD12-201ENST00000339157 2117 ntAPPRIS P1 TSL 2 BASIC18.38■□□□□ 0.53
LINC00959A0A1B0GUT2 MLST8-203ENST00000397124 1691 ntAPPRIS P3 TSL 5 BASIC18.38■□□□□ 0.53
LINC00959A0A1B0GUT2 TMEM158-201ENST00000503771 1813 ntAPPRIS P1 BASIC18.38■□□□□ 0.53
LINC00959A0A1B0GUT2 NGB-201ENST00000298352 1884 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
LINC00959A0A1B0GUT2 GXYLT1-201ENST00000280876 1937 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
LINC00959A0A1B0GUT2 UCK1-201ENST00000372208 2063 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
LINC00959A0A1B0GUT2 CUEDC1-201ENST00000360238 2193 ntAPPRIS P1 TSL 2 BASIC18.37■□□□□ 0.53
LINC00959A0A1B0GUT2 CACNG6-201ENST00000252729 1853 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
LINC00959A0A1B0GUT2 MEX3D-201ENST00000402693 2850 ntAPPRIS P2 TSL 1 (best) BASIC18.36■□□□□ 0.53
LINC00959A0A1B0GUT2 COL13A1-210ENST00000517713 2007 ntAPPRIS ALT2 TSL 5 BASIC18.36■□□□□ 0.53
LINC00959A0A1B0GUT2 PQLC1-211ENST00000590381 1247 ntTSL 2 BASIC18.36■□□□□ 0.53
LINC00959A0A1B0GUT2 MAPK13-201ENST00000211287 2052 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
LINC00959A0A1B0GUT2 ARHGEF7-205ENST00000375739 5375 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
LINC00959A0A1B0GUT2 SPIRE1-202ENST00000409402 5665 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
LINC00959A0A1B0GUT2 SLC22A23-201ENST00000380298 1574 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
LINC00959A0A1B0GUT2 SSBP4-206ENST00000599699 793 ntTSL 2 BASIC18.34■□□□□ 0.53
LINC00959A0A1B0GUT2 ACOT7-201ENST00000361521 2429 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
LINC00959A0A1B0GUT2 CCZ1B-215ENST00000626257 2211 ntTSL 2 BASIC18.34■□□□□ 0.53
LINC00959A0A1B0GUT2 ABCB10P3-201ENST00000561950 2166 ntBASIC18.34■□□□□ 0.53
LINC00959A0A1B0GUT2 CNIH2-203ENST00000528852 1524 ntAPPRIS ALT1 TSL 1 (best) BASIC18.33■□□□□ 0.53
LINC00959A0A1B0GUT2 DCBLD1-201ENST00000296955 1979 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.53
LINC00959A0A1B0GUT2 PI4KAP1-202ENST00000611748 1906 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
LINC00959A0A1B0GUT2 HMGB1-205ENST00000399494 1282 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.52
LINC00959A0A1B0GUT2 AP002365.1-201ENST00000603448 772 ntBASIC18.33■□□□□ 0.52
LINC00959A0A1B0GUT2 RNF130-205ENST00000521389 2263 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
LINC00959A0A1B0GUT2 HMX1-201ENST00000400677 1895 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
LINC00959A0A1B0GUT2 PHOX2A-201ENST00000298231 1699 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
LINC00959A0A1B0GUT2 CATIP-201ENST00000289388 1323 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
LINC00959A0A1B0GUT2 ARTN-201ENST00000372354 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
LINC00959A0A1B0GUT2 MAF-203ENST00000569649 1217 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
LINC00959A0A1B0GUT2 HOXB3-210ENST00000489475 1845 ntTSL 2 BASIC18.32■□□□□ 0.52
LINC00959A0A1B0GUT2 RTN2-201ENST00000245923 2293 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
LINC00959A0A1B0GUT2 CIC-201ENST00000160740 6111 ntAPPRIS ALT1 TSL 5 BASIC18.31■□□□□ 0.52
LINC00959A0A1B0GUT2 CGREF1-203ENST00000402394 1906 ntAPPRIS P2 TSL 2 BASIC18.31■□□□□ 0.52
LINC00959A0A1B0GUT2 PXDC1-202ENST00000380283 2190 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
LINC00959A0A1B0GUT2 FGFRL1-205ENST00000510644 2304 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
LINC00959A0A1B0GUT2 FAM58A-202ENST00000440428 1164 ntAPPRIS P2 TSL 2 BASIC18.31■□□□□ 0.52
LINC00959A0A1B0GUT2 CGREF1-202ENST00000312734 1610 ntAPPRIS P2 TSL 5 BASIC18.31■□□□□ 0.52
LINC00959A0A1B0GUT2 SH3GL3-202ENST00000427482 1806 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
LINC00959A0A1B0GUT2 H2AFV-202ENST00000308153 752 ntAPPRIS P4 TSL 1 (best) BASIC18.3■□□□□ 0.52
LINC00959A0A1B0GUT2 GALK1-205ENST00000588479 1866 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
LINC00959A0A1B0GUT2 AL161658.1-201ENST00000623641 1967 ntBASIC18.3■□□□□ 0.52
LINC00959A0A1B0GUT2 ANKS1B-202ENST00000333732 1675 ntTSL 2 BASIC18.29■□□□□ 0.52
LINC00959A0A1B0GUT2 ADGRB2-204ENST00000398542 5176 ntTSL 5 BASIC18.29■□□□□ 0.52
LINC00959A0A1B0GUT2 PQLC1-202ENST00000357575 2475 ntAPPRIS ALT1 TSL 5 BASIC18.28■□□□□ 0.52
LINC00959A0A1B0GUT2 ST6GALNAC6-203ENST00000373142 2448 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
LINC00959A0A1B0GUT2 RCC1L-202ENST00000614461 2419 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
LINC00959A0A1B0GUT2 RRAGC-201ENST00000373001 2732 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
LINC00959A0A1B0GUT2 KCTD17-202ENST00000403888 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
LINC00959A0A1B0GUT2 ACTR3B-202ENST00000377776 1566 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
LINC00959A0A1B0GUT2 GIPC1-203ENST00000393033 1926 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
LINC00959A0A1B0GUT2 TPI1-201ENST00000229270 1763 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
LINC00959A0A1B0GUT2 ZNF513-201ENST00000323703 2139 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
LINC00959A0A1B0GUT2 MSX1-201ENST00000382723 1939 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
LINC00959A0A1B0GUT2 AMN-201ENST00000299155 1907 ntAPPRIS P2 TSL 1 (best) BASIC18.25■□□□□ 0.51
LINC00959A0A1B0GUT2 TSPAN33-201ENST00000486685 1863 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
LINC00959A0A1B0GUT2 CHPT1-205ENST00000549872 2001 ntAPPRIS ALT2 TSL 5 BASIC18.24■□□□□ 0.51
LINC00959A0A1B0GUT2 LDB1-202ENST00000425280 2089 ntTSL 5 BASIC18.24■□□□□ 0.51
LINC00959A0A1B0GUT2 HNRNPAB-206ENST00000506339 1747 ntAPPRIS ALT2 TSL 5 BASIC18.23■□□□□ 0.51
LINC00959A0A1B0GUT2 BIN1-204ENST00000348750 2074 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
LINC00959A0A1B0GUT2 LRRC61-202ENST00000359623 1877 ntAPPRIS P1 TSL 2 BASIC18.23■□□□□ 0.51
LINC00959A0A1B0GUT2 CHMP4B-201ENST00000217402 1646 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
LINC00959A0A1B0GUT2 PGM5-201ENST00000396392 1782 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
LINC00959A0A1B0GUT2 SSBP4-202ENST00000348495 1721 ntAPPRIS ALT1 TSL 2 BASIC18.22■□□□□ 0.51
LINC00959A0A1B0GUT2 TESK1-206ENST00000620767 2438 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
LINC00959A0A1B0GUT2 ST7-AS1-201ENST00000456775 1889 ntBASIC18.22■□□□□ 0.51
LINC00959A0A1B0GUT2 MBD2-201ENST00000256429 5188 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
LINC00959A0A1B0GUT2 ANAPC11-203ENST00000392376 687 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
LINC00959A0A1B0GUT2 MSX2-202ENST00000507785 1188 ntTSL 2 BASIC18.21■□□□□ 0.51
LINC00959A0A1B0GUT2 CUL4A-202ENST00000375440 2364 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
LINC00959A0A1B0GUT2 ARL8A-201ENST00000272217 1793 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
LINC00959A0A1B0GUT2 ARTN-211ENST00000498139 1303 ntAPPRIS P4 TSL 1 (best) BASIC18.21■□□□□ 0.51
LINC00959A0A1B0GUT2 SIRT3-201ENST00000382743 2543 ntAPPRIS P2 TSL 1 (best) BASIC18.2■□□□□ 0.5
LINC00959A0A1B0GUT2 ABHD17A-201ENST00000250974 1630 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
LINC00959A0A1B0GUT2 EMC10-202ENST00000376918 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
LINC00959A0A1B0GUT2 TPRA1-202ENST00000355552 1933 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
LINC00959A0A1B0GUT2 FOXG1-201ENST00000313071 4890 ntAPPRIS P1 BASIC18.19■□□□□ 0.5
LINC00959A0A1B0GUT2 EXOC3L4-201ENST00000380069 2293 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
LINC00959A0A1B0GUT2 EFNA1-202ENST00000368407 1926 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
LINC00959A0A1B0GUT2 ZBTB10-204ENST00000455036 5458 ntAPPRIS P3 TSL 2 BASIC18.19■□□□□ 0.5
LINC00959A0A1B0GUT2 CCDC88C-205ENST00000553403 1651 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
LINC00959A0A1B0GUT2 TPRA1-209ENST00000489960 1903 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
LINC00959A0A1B0GUT2 RAB26-201ENST00000210187 1675 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
LINC00959A0A1B0GUT2 HES7-202ENST00000541682 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC18.18■□□□□ 0.5
LINC00959A0A1B0GUT2 HRH3-201ENST00000317393 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 17 ms