Protein–RNA interactions for Protein: P08559

PDHA1, Pyruvate dehydrogenase E1 component subunit alpha, somatic form, mitochondrial, humanhuman

Predictions only

Length 390 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDHA1P08559 AKR1E2-201ENST00000298375 1566 ntAPPRIS P1 TSL 1 (best) BASIC28.36■■■□□ 2.13
PDHA1P08559 MAFA-201ENST00000333480 2347 ntAPPRIS P1 BASIC28.35■■■□□ 2.13
PDHA1P08559 LINC01578-204ENST00000554894 556 ntTSL 3 BASIC28.33■■■□□ 2.13
PDHA1P08559 LINC01578-207ENST00000556895 802 ntTSL 2 BASIC28.33■■■□□ 2.13
PDHA1P08559 FAM89A-201ENST00000366654 1495 ntAPPRIS P1 TSL 1 (best) BASIC28.33■■■□□ 2.13
PDHA1P08559 SHC2-201ENST00000264554 2494 ntAPPRIS P1 TSL 1 (best) BASIC28.31■■■□□ 2.12
PDHA1P08559 HMGB1-205ENST00000399494 1282 ntAPPRIS P1 TSL 2 BASIC28.3■■■□□ 2.12
PDHA1P08559 CMAS-201ENST00000229329 1787 ntAPPRIS P1 TSL 1 (best) BASIC28.29■■■□□ 2.12
PDHA1P08559 TWIST1-201ENST00000242261 1666 ntAPPRIS P1 TSL 1 (best) BASIC28.29■■■□□ 2.12
PDHA1P08559 SSBP4-206ENST00000599699 793 ntTSL 2 BASIC28.29■■■□□ 2.12
PDHA1P08559 PCSK6-201ENST00000331826 2309 ntTSL 5 BASIC28.26■■■□□ 2.11
PDHA1P08559 TXNRD2-204ENST00000400521 2115 ntAPPRIS P2 TSL 1 (best) BASIC28.25■■■□□ 2.11
PDHA1P08559 SCARA3-202ENST00000337221 1910 ntTSL 1 (best) BASIC28.24■■■□□ 2.11
PDHA1P08559 CBX4-202ENST00000448310 718 ntAPPRIS ALT2 TSL 3 BASIC28.23■■■□□ 2.11
PDHA1P08559 KCTD17-209ENST00000610767 1502 ntAPPRIS ALT2 TSL 3 BASIC28.23■■■□□ 2.11
PDHA1P08559 SIAH1-203ENST00000394725 2147 ntAPPRIS P3 TSL 1 (best) BASIC28.22■■■□□ 2.11
PDHA1P08559 NRGN-202ENST00000412681 1106 ntAPPRIS P1 TSL 1 (best) BASIC28.21■■■□□ 2.11
PDHA1P08559 NRG3-203ENST00000404547 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC28.21■■■□□ 2.11
PDHA1P08559 AC008105.3-203ENST00000591365 2238 ntTSL 2 BASIC28.18■■■□□ 2.1
PDHA1P08559 MPST-201ENST00000341116 1504 ntAPPRIS P1 TSL 5 BASIC28.18■■■□□ 2.1
PDHA1P08559 NRTN-201ENST00000303212 1109 ntAPPRIS P1 TSL 1 (best) BASIC28.17■■■□□ 2.1
PDHA1P08559 LINC01089-207ENST00000538335 630 ntTSL 3 BASIC28.17■■■□□ 2.1
PDHA1P08559 RASGEF1C-207ENST00000615330 2268 ntTSL 5 BASIC28.16■■■□□ 2.1
PDHA1P08559 CCZ1-201ENST00000325974 1802 ntAPPRIS P1 TSL 1 (best) BASIC28.13■■■□□ 2.09
PDHA1P08559 WSB2-211ENST00000544233 2503 ntTSL 2 BASIC28.13■■■□□ 2.09
PDHA1P08559 ECI1-201ENST00000301729 1541 ntAPPRIS P2 TSL 1 (best) BASIC28.13■■■□□ 2.09
PDHA1P08559 MTCP1-202ENST00000369476 2274 ntAPPRIS P1 TSL 3 BASIC28.12■■■□□ 2.09
PDHA1P08559 SH3BP2-221ENST00000511747 2351 ntAPPRIS P3 TSL 1 (best) BASIC28.11■■■□□ 2.09
PDHA1P08559 MSX2-202ENST00000507785 1188 ntTSL 2 BASIC28.1■■■□□ 2.09
PDHA1P08559 GRK2-204ENST00000526285 1458 ntTSL 5 BASIC28.09■■■□□ 2.09
PDHA1P08559 CDK2AP1-203ENST00000535979 1281 ntTSL 3 BASIC28.09■■■□□ 2.09
PDHA1P08559 VPS37D-201ENST00000324941 1624 ntAPPRIS P1 TSL 1 (best) BASIC28.08■■■□□ 2.09
PDHA1P08559 KCTD17-201ENST00000402077 1691 ntAPPRIS P3 TSL 1 (best) BASIC28.07■■■□□ 2.08
PDHA1P08559 JUND-201ENST00000252818 1863 ntAPPRIS P1 BASIC28.07■■■□□ 2.08
PDHA1P08559 RSG1-201ENST00000375599 1545 ntAPPRIS P1 TSL 1 (best) BASIC28.07■■■□□ 2.08
PDHA1P08559 AC068152.1-207ENST00000573341 647 ntTSL 2 BASIC28.06■■■□□ 2.08
PDHA1P08559 CSPG5-205ENST00000610462 2073 ntTSL 5 BASIC28.06■■■□□ 2.08
PDHA1P08559 CERS2-201ENST00000271688 2544 ntAPPRIS P1 TSL 5 BASIC28.06■■■□□ 2.08
PDHA1P08559 SNTG2-201ENST00000308624 1888 ntAPPRIS P1 TSL 1 (best) BASIC28.04■■■□□ 2.08
PDHA1P08559 SNX24-201ENST00000261369 2158 ntAPPRIS P1 TSL 1 (best) BASIC28.01■■■□□ 2.08
PDHA1P08559 LFNG-201ENST00000222725 2377 ntAPPRIS P4 TSL 5 BASIC28.01■■■□□ 2.07
PDHA1P08559 ADNP-AS1-201ENST00000558899 927 ntTSL 3 BASIC28.01■■■□□ 2.07
PDHA1P08559 RASSF7-202ENST00000397583 1928 ntAPPRIS P3 TSL 1 (best) BASIC28■■■□□ 2.07
PDHA1P08559 MAPK4-202ENST00000540640 1576 ntTSL 2 BASIC28■■■□□ 2.07
PDHA1P08559 GIPC1-201ENST00000345425 1782 ntAPPRIS P1 TSL 1 (best) BASIC27.99■■■□□ 2.07
PDHA1P08559 BMP7-202ENST00000395864 1746 ntTSL 5 BASIC27.98■■■□□ 2.07
PDHA1P08559 CATIP-201ENST00000289388 1323 ntAPPRIS P1 TSL 1 (best) BASIC27.97■■■□□ 2.07
PDHA1P08559 CHCHD4-201ENST00000295767 1603 ntTSL 2 BASIC27.97■■■□□ 2.07
PDHA1P08559 AC025431.1-201ENST00000559684 874 ntTSL 3 BASIC27.97■■■□□ 2.07
PDHA1P08559 TRAPPC10-202ENST00000380221 1763 ntTSL 1 (best) BASIC27.96■■■□□ 2.07
PDHA1P08559 OLFM2-201ENST00000264833 2019 ntAPPRIS P1 TSL 1 (best) BASIC27.96■■■□□ 2.07
PDHA1P08559 FMR1-219ENST00000621453 1864 ntTSL 1 (best) BASIC27.96■■■□□ 2.07
PDHA1P08559 RNF215-203ENST00000382363 1992 ntAPPRIS P2 TSL 1 (best) BASIC27.96■■■□□ 2.07
PDHA1P08559 ANKS1B-202ENST00000333732 1675 ntTSL 2 BASIC27.95■■■□□ 2.07
PDHA1P08559 KLF16-203ENST00000592313 508 ntTSL 3 BASIC27.95■■■□□ 2.06
PDHA1P08559 BRF1-221ENST00000619151 1530 ntTSL 5 BASIC27.95■■■□□ 2.06
PDHA1P08559 RDX-206ENST00000528900 1814 ntTSL 1 (best) BASIC27.92■■■□□ 2.06
PDHA1P08559 ADRA2C-202ENST00000509482 1600 ntTSL 3 BASIC27.92■■■□□ 2.06
PDHA1P08559 PDXP-201ENST00000215904 2010 ntAPPRIS P1 TSL 1 (best) BASIC27.9■■■□□ 2.06
PDHA1P08559 GNPTAB-206ENST00000549940 1678 ntTSL 1 (best) BASIC27.9■■■□□ 2.06
PDHA1P08559 LFNG-203ENST00000359574 1377 ntAPPRIS ALT1 TSL 1 (best) BASIC27.89■■■□□ 2.06
PDHA1P08559 CCM2-218ENST00000541586 1719 ntTSL 3 BASIC27.89■■■□□ 2.05
PDHA1P08559 AC243773.2-204ENST00000621428 1462 ntTSL 1 (best) BASIC27.89■■■□□ 2.05
PDHA1P08559 GRASP-201ENST00000293662 1933 ntAPPRIS P1 TSL 1 (best) BASIC27.88■■■□□ 2.05
PDHA1P08559 AC079305.1-201ENST00000428541 499 ntTSL 3 BASIC27.88■■■□□ 2.05
PDHA1P08559 RARRES2P7-201ENST00000567349 469 ntBASIC27.88■■■□□ 2.05
PDHA1P08559 ANGPTL6-204ENST00000592641 1781 ntAPPRIS P1 TSL 1 (best) BASIC27.85■■■□□ 2.05
PDHA1P08559 EMID1-201ENST00000334018 2173 ntAPPRIS P1 TSL 1 (best) BASIC27.84■■■□□ 2.05
PDHA1P08559 HOXB3-211ENST00000490677 1109 ntTSL 1 (best) BASIC27.84■■■□□ 2.05
PDHA1P08559 ARMC10-211ENST00000541300 2266 ntTSL 1 (best) BASIC27.83■■■□□ 2.05
PDHA1P08559 AC009133.5-201ENST00000562594 473 ntTSL 4 BASIC27.81■■■□□ 2.04
PDHA1P08559 CDKN2D-202ENST00000393599 1422 ntAPPRIS P1 TSL 1 (best) BASIC27.81■■■□□ 2.04
PDHA1P08559 INAFM1-201ENST00000552360 1255 ntAPPRIS P1 BASIC27.77■■■□□ 2.04
PDHA1P08559 DBP-205ENST00000601104 1489 ntTSL 1 (best) BASIC27.76■■■□□ 2.03
PDHA1P08559 HOXB3-207ENST00000472863 1909 ntTSL 2 BASIC27.75■■■□□ 2.03
PDHA1P08559 CPNE1-203ENST00000397442 1695 ntTSL 5 BASIC27.75■■■□□ 2.03
PDHA1P08559 SMARCD3-201ENST00000262188 1993 ntAPPRIS P1 TSL 1 (best) BASIC27.74■■■□□ 2.03
PDHA1P08559 IL13RA1-201ENST00000371642 1096 ntTSL 1 (best) BASIC27.74■■■□□ 2.03
PDHA1P08559 SETD8P1-201ENST00000623146 1180 ntBASIC27.74■■■□□ 2.03
PDHA1P08559 TMEM80-202ENST00000397512 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC27.73■■■□□ 2.03
PDHA1P08559 CCM2-201ENST00000258781 1894 ntAPPRIS P3 TSL 1 (best) BASIC27.73■■■□□ 2.03
PDHA1P08559 TXN-202ENST00000374517 869 ntAPPRIS P1 TSL 1 (best) BASIC27.73■■■□□ 2.03
PDHA1P08559 LRRC10B-201ENST00000378075 2219 ntAPPRIS P1 BASIC27.73■■■□□ 2.03
PDHA1P08559 ARTN-204ENST00000438616 889 ntTSL 1 (best) BASIC27.72■■■□□ 2.03
PDHA1P08559 SLC22A23-201ENST00000380298 1574 ntTSL 1 (best) BASIC27.72■■■□□ 2.03
PDHA1P08559 CERS1-201ENST00000429504 2094 ntTSL 1 (best) BASIC27.7■■■□□ 2.02
PDHA1P08559 CISD3-204ENST00000613478 2074 ntAPPRIS P1 TSL 2 BASIC27.7■■■□□ 2.02
PDHA1P08559 TP53I13-201ENST00000301057 1530 ntAPPRIS P2 TSL 1 (best) BASIC27.7■■■□□ 2.02
PDHA1P08559 TMEM229A-201ENST00000455783 2108 ntAPPRIS P1 BASIC27.69■■■□□ 2.02
PDHA1P08559 AC105285.1-201ENST00000500914 2036 ntTSL 1 (best) BASIC27.68■■■□□ 2.02
PDHA1P08559 ATPAF1-201ENST00000329231 1241 ntTSL 2 BASIC27.68■■■□□ 2.02
PDHA1P08559 AL133380.1-201ENST00000506013 324 ntBASIC27.68■■■□□ 2.02
PDHA1P08559 PXDC1-202ENST00000380283 2190 ntAPPRIS P1 TSL 1 (best) BASIC27.66■■■□□ 2.02
PDHA1P08559 CACNG6-201ENST00000252729 1853 ntAPPRIS P1 TSL 1 (best) BASIC27.65■■■□□ 2.02
PDHA1P08559 CTDNEP1-201ENST00000318988 1549 ntAPPRIS P1 TSL 1 (best) BASIC27.63■■■□□ 2.01
PDHA1P08559 UBALD2-203ENST00000589240 660 ntTSL 2 BASIC27.63■■■□□ 2.01
PDHA1P08559 DEXI-201ENST00000331808 1561 ntAPPRIS P1 TSL 1 (best) BASIC27.63■■■□□ 2.01
PDHA1P08559 MZT2B-202ENST00000409255 769 ntAPPRIS ALT2 TSL 5 BASIC27.62■■■□□ 2.01
PDHA1P08559 AC120057.4-201ENST00000624722 1615 ntBASIC27.62■■■□□ 2.01
PDHA1P08559 NIT1-201ENST00000368007 1749 ntTSL 2 BASIC27.61■■■□□ 2.01
Retrieved 100 of 98,524 protein–RNA pairs in 24.9 ms