Protein–RNA interactions for Protein: P01374

LTA, Lymphotoxin-alpha, humanhuman

Predictions only

Length 205 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LTAP01374 BCL7B-201ENST00000223368 1975 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
LTAP01374 TMEM268-201ENST00000288502 2314 ntAPPRIS P3 TSL 1 (best) BASIC21.09■□□□□ 0.97
LTAP01374 GATA6-202ENST00000581694 2057 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
LTAP01374 FSD1L-204ENST00000469022 1836 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
LTAP01374 NIT1-201ENST00000368007 1749 ntTSL 2 BASIC21.04■□□□□ 0.96
LTAP01374 HOXD13-201ENST00000392539 2240 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
LTAP01374 GNB5-202ENST00000358784 1735 ntAPPRIS ALT1 TSL 1 (best) BASIC21.03■□□□□ 0.96
LTAP01374 FOXA2-202ENST00000419308 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.96
LTAP01374 FTCD-204ENST00000397748 1955 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
LTAP01374 ELK4-201ENST00000289703 2118 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
LTAP01374 MATK-201ENST00000310132 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
LTAP01374 EFNA1-202ENST00000368407 1926 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
LTAP01374 MSRB2-201ENST00000376510 1803 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
LTAP01374 PPP1CC-202ENST00000340766 1472 ntTSL 2 BASIC21■□□□□ 0.95
LTAP01374 MEX3D-201ENST00000402693 2850 ntAPPRIS P2 TSL 1 (best) BASIC20.99■□□□□ 0.95
LTAP01374 MAPK13-201ENST00000211287 2052 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
LTAP01374 ABCB10P1-201ENST00000614297 2181 ntBASIC20.98■□□□□ 0.95
LTAP01374 ZBTB12-201ENST00000375527 1875 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
LTAP01374 LTB4R2-204ENST00000533293 1515 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
LTAP01374 ARRDC1-201ENST00000371421 1586 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
LTAP01374 ST6GALNAC6-203ENST00000373142 2448 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
LTAP01374 AGAP3-216ENST00000479901 1881 ntTSL 5 BASIC20.94■□□□□ 0.94
LTAP01374 INO80B-203ENST00000409917 796 ntTSL 2 BASIC20.94■□□□□ 0.94
LTAP01374 ARL8A-204ENST00000614750 1727 ntTSL 3 BASIC20.94■□□□□ 0.94
LTAP01374 GALR3-201ENST00000249041 1157 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
LTAP01374 AL357033.3-201ENST00000620143 614 ntTSL 3 BASIC20.93■□□□□ 0.94
LTAP01374 KLHL35-204ENST00000539798 1936 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
LTAP01374 TPRA1-201ENST00000296210 1725 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
LTAP01374 CCM2-218ENST00000541586 1719 ntTSL 3 BASIC20.92■□□□□ 0.94
LTAP01374 ANGPTL6-201ENST00000253109 1900 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
LTAP01374 PCYT2-205ENST00000570391 1857 ntTSL 2 BASIC20.92■□□□□ 0.94
LTAP01374 ANKRD13D-211ENST00000511455 2139 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
LTAP01374 TPI1-201ENST00000229270 1763 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
LTAP01374 CUEDC1-201ENST00000360238 2193 ntAPPRIS P1 TSL 2 BASIC20.9■□□□□ 0.94
LTAP01374 CHCHD4-202ENST00000396914 1405 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
LTAP01374 PANK2-207ENST00000610179 1807 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.93
LTAP01374 AC120057.4-201ENST00000624722 1615 ntBASIC20.87■□□□□ 0.93
LTAP01374 AC015813.7-201ENST00000623294 581 ntBASIC20.87■□□□□ 0.93
LTAP01374 NGB-201ENST00000298352 1884 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
LTAP01374 ABCB10P3-201ENST00000561950 2166 ntBASIC20.87■□□□□ 0.93
LTAP01374 ANKRD65-203ENST00000454272 1506 ntAPPRIS P1 TSL 5 BASIC20.87■□□□□ 0.93
LTAP01374 AC105285.1-201ENST00000500914 2036 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
LTAP01374 CCZ1B-215ENST00000626257 2211 ntTSL 2 BASIC20.85■□□□□ 0.93
LTAP01374 TPM2-203ENST00000378292 2147 ntAPPRIS ALT1 TSL 1 (best) BASIC20.84■□□□□ 0.93
LTAP01374 FADS3-201ENST00000278829 1779 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
LTAP01374 BMP7-202ENST00000395864 1746 ntTSL 5 BASIC20.83■□□□□ 0.92
LTAP01374 RTN2-201ENST00000245923 2293 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
LTAP01374 RRAGC-201ENST00000373001 2732 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
LTAP01374 COL13A1-212ENST00000520133 1833 ntTSL 5 BASIC20.82■□□□□ 0.92
LTAP01374 MPST-201ENST00000341116 1504 ntAPPRIS P1 TSL 5 BASIC20.82■□□□□ 0.92
LTAP01374 ATRNL1-207ENST00000527407 1583 ntTSL 5 BASIC20.81■□□□□ 0.92
LTAP01374 GNPTAB-206ENST00000549940 1678 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
LTAP01374 MAPK12-201ENST00000215659 1918 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
LTAP01374 RNF130-205ENST00000521389 2263 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
LTAP01374 TRAPPC10-202ENST00000380221 1763 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
LTAP01374 FGFRL1-205ENST00000510644 2304 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
LTAP01374 BIN1-204ENST00000348750 2074 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
LTAP01374 JUND-201ENST00000252818 1863 ntAPPRIS P1 BASIC20.79■□□□□ 0.92
LTAP01374 UCK1-201ENST00000372208 2063 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
LTAP01374 PQLC1-202ENST00000357575 2475 ntAPPRIS ALT1 TSL 5 BASIC20.79■□□□□ 0.92
LTAP01374 NFKBIA-209ENST00000557389 1537 ntTSL 2 BASIC20.78■□□□□ 0.92
LTAP01374 RCC1L-201ENST00000610322 2300 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
LTAP01374 TESK1-206ENST00000620767 2438 ntAPPRIS P1 TSL 5 BASIC20.78■□□□□ 0.92
LTAP01374 EXOC3L4-201ENST00000380069 2293 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
LTAP01374 TPRA1-202ENST00000355552 1933 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
LTAP01374 SLC2A4RG-201ENST00000266077 1731 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
LTAP01374 CD151-202ENST00000397420 1648 ntAPPRIS P2 TSL 1 (best) BASIC20.74■□□□□ 0.91
LTAP01374 HOXD8-201ENST00000313173 1917 ntAPPRIS P3 TSL 2 BASIC20.73■□□□□ 0.91
LTAP01374 HOXB3-207ENST00000472863 1909 ntTSL 2 BASIC20.72■□□□□ 0.91
LTAP01374 SHF-206ENST00000560471 2499 ntTSL 5 BASIC20.71■□□□□ 0.91
LTAP01374 DCBLD1-201ENST00000296955 1979 ntAPPRIS P2 TSL 1 (best) BASIC20.71■□□□□ 0.91
LTAP01374 CGREF1-203ENST00000402394 1906 ntAPPRIS P2 TSL 2 BASIC20.7■□□□□ 0.91
LTAP01374 PHOX2A-201ENST00000298231 1699 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.91
LTAP01374 CAPNS1-201ENST00000246533 1918 ntAPPRIS P2 TSL 1 (best) BASIC20.7■□□□□ 0.9
LTAP01374 RCC1L-202ENST00000614461 2419 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
LTAP01374 LY6K-202ENST00000518841 855 ntAPPRIS ALT2 TSL 2 BASIC20.68■□□□□ 0.9
LTAP01374 CCND3-203ENST00000372991 2085 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
LTAP01374 EXOC3-209ENST00000512944 2825 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
LTAP01374 DEXI-201ENST00000331808 1561 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
LTAP01374 TMEM80-202ENST00000397512 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
LTAP01374 GIPC1-203ENST00000393033 1926 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
LTAP01374 TPRA1-209ENST00000489960 1903 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
LTAP01374 KCTD17-202ENST00000403888 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
LTAP01374 FAM89B-203ENST00000530349 1263 ntAPPRIS P1 TSL 2 BASIC20.65■□□□□ 0.9
LTAP01374 COL13A1-210ENST00000517713 2007 ntAPPRIS ALT2 TSL 5 BASIC20.63■□□□□ 0.89
LTAP01374 FZD2-201ENST00000315323 2112 ntAPPRIS P1 BASIC20.63■□□□□ 0.89
LTAP01374 ABHD12-201ENST00000339157 2117 ntAPPRIS P1 TSL 2 BASIC20.62■□□□□ 0.89
LTAP01374 GIPC1-202ENST00000393028 1483 ntTSL 3 BASIC20.62■□□□□ 0.89
LTAP01374 HMX1-201ENST00000400677 1895 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
LTAP01374 TMEM158-201ENST00000503771 1813 ntAPPRIS P1 BASIC20.59■□□□□ 0.89
LTAP01374 AC139426.1-201ENST00000568218 2529 ntBASIC20.58■□□□□ 0.89
LTAP01374 VWA1-201ENST00000338660 2147 ntTSL 2 BASIC20.57■□□□□ 0.88
LTAP01374 TRNP1-201ENST00000522111 1958 ntAPPRIS P2 TSL 1 (best) BASIC20.57■□□□□ 0.88
LTAP01374 CUL4A-202ENST00000375440 2364 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
LTAP01374 CPNE1-203ENST00000397442 1695 ntTSL 5 BASIC20.56■□□□□ 0.88
LTAP01374 GXYLT1-201ENST00000280876 1937 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
LTAP01374 CMAS-201ENST00000229329 1787 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
LTAP01374 KCTD17-209ENST00000610767 1502 ntAPPRIS ALT2 TSL 3 BASIC20.55■□□□□ 0.88
LTAP01374 MAPK1-202ENST00000398822 1487 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
LTAP01374 AMN-201ENST00000299155 1907 ntAPPRIS P2 TSL 1 (best) BASIC20.53■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 46 ms