Protein–RNA interactions for Protein: A0A5B6

TCRBV3S1, T-cell receptor beta variable 28 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV3S1A0A5B6 RNF215-203ENST00000382363 1992 ntAPPRIS P2 TSL 1 (best) BASIC26.38■■□□□ 1.81
TCRBV3S1A0A5B6 FSD1L-204ENST00000469022 1836 ntTSL 1 (best) BASIC26.37■■□□□ 1.81
TCRBV3S1A0A5B6 GATA6-202ENST00000581694 2057 ntAPPRIS P1 TSL 1 (best) BASIC26.37■■□□□ 1.81
TCRBV3S1A0A5B6 ST6GALNAC6-203ENST00000373142 2448 ntTSL 1 (best) BASIC26.37■■□□□ 1.81
TCRBV3S1A0A5B6 MAPK13-201ENST00000211287 2052 ntAPPRIS P1 TSL 1 (best) BASIC26.35■■□□□ 1.81
TCRBV3S1A0A5B6 ABCB10P1-201ENST00000614297 2181 ntBASIC26.34■■□□□ 1.81
TCRBV3S1A0A5B6 CYP26C1-201ENST00000285949 1569 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.81
TCRBV3S1A0A5B6 ELK4-201ENST00000289703 2118 ntTSL 1 (best) BASIC26.33■■□□□ 1.81
TCRBV3S1A0A5B6 NIT1-201ENST00000368007 1749 ntTSL 2 BASIC26.28■■□□□ 1.8
TCRBV3S1A0A5B6 AGAP3-216ENST00000479901 1881 ntTSL 5 BASIC26.28■■□□□ 1.8
TCRBV3S1A0A5B6 TPI1-201ENST00000229270 1763 ntTSL 1 (best) BASIC26.27■■□□□ 1.8
TCRBV3S1A0A5B6 KLHL35-204ENST00000539798 1936 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
TCRBV3S1A0A5B6 ZBTB12-201ENST00000375527 1875 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
TCRBV3S1A0A5B6 DRD4-201ENST00000176183 1375 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
TCRBV3S1A0A5B6 TPRA1-201ENST00000296210 1725 ntTSL 1 (best) BASIC26.24■■□□□ 1.79
TCRBV3S1A0A5B6 ANKRD13D-211ENST00000511455 2139 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
TCRBV3S1A0A5B6 CUEDC1-201ENST00000360238 2193 ntAPPRIS P1 TSL 2 BASIC26.23■■□□□ 1.79
TCRBV3S1A0A5B6 MSRB2-201ENST00000376510 1803 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
TCRBV3S1A0A5B6 RRAGC-201ENST00000373001 2732 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
TCRBV3S1A0A5B6 ANGPTL6-201ENST00000253109 1900 ntAPPRIS P1 TSL 1 (best) BASIC26.22■■□□□ 1.79
TCRBV3S1A0A5B6 GNB5-202ENST00000358784 1735 ntAPPRIS ALT1 TSL 1 (best) BASIC26.21■■□□□ 1.79
TCRBV3S1A0A5B6 ABCB10P3-201ENST00000561950 2166 ntBASIC26.21■■□□□ 1.79
TCRBV3S1A0A5B6 HOXB3-208ENST00000476342 1420 ntAPPRIS P1 TSL 1 (best) BASIC26.21■■□□□ 1.79
TCRBV3S1A0A5B6 INO80B-201ENST00000233331 1261 ntAPPRIS P1 TSL 1 (best) BASIC26.2■■□□□ 1.78
TCRBV3S1A0A5B6 CCZ1B-215ENST00000626257 2211 ntTSL 2 BASIC26.19■■□□□ 1.78
TCRBV3S1A0A5B6 ARL8A-204ENST00000614750 1727 ntTSL 3 BASIC26.19■■□□□ 1.78
TCRBV3S1A0A5B6 RCC1L-201ENST00000610322 2300 ntAPPRIS P1 TSL 1 (best) BASIC26.17■■□□□ 1.78
TCRBV3S1A0A5B6 RTN2-201ENST00000245923 2293 ntTSL 1 (best) BASIC26.17■■□□□ 1.78
TCRBV3S1A0A5B6 NGB-201ENST00000298352 1884 ntAPPRIS P1 TSL 1 (best) BASIC26.17■■□□□ 1.78
TCRBV3S1A0A5B6 PQLC1-202ENST00000357575 2475 ntAPPRIS ALT1 TSL 5 BASIC26.16■■□□□ 1.78
TCRBV3S1A0A5B6 PANK2-207ENST00000610179 1807 ntAPPRIS ALT2 TSL 1 (best) BASIC26.16■■□□□ 1.78
TCRBV3S1A0A5B6 CMTM4-202ENST00000394106 1187 ntAPPRIS P1 TSL 1 (best) BASIC26.15■■□□□ 1.78
TCRBV3S1A0A5B6 CMTM4-204ENST00000563952 1023 ntTSL 1 (best) BASIC26.15■■□□□ 1.78
TCRBV3S1A0A5B6 PPP1CC-202ENST00000340766 1472 ntTSL 2 BASIC26.14■■□□□ 1.78
TCRBV3S1A0A5B6 CCM2-218ENST00000541586 1719 ntTSL 3 BASIC26.14■■□□□ 1.77
TCRBV3S1A0A5B6 BIN1-204ENST00000348750 2074 ntTSL 1 (best) BASIC26.13■■□□□ 1.77
TCRBV3S1A0A5B6 RNF130-205ENST00000521389 2263 ntAPPRIS P1 TSL 1 (best) BASIC26.13■■□□□ 1.77
TCRBV3S1A0A5B6 TPM2-203ENST00000378292 2147 ntAPPRIS ALT1 TSL 1 (best) BASIC26.12■■□□□ 1.77
TCRBV3S1A0A5B6 TESK1-206ENST00000620767 2438 ntAPPRIS P1 TSL 5 BASIC26.12■■□□□ 1.77
TCRBV3S1A0A5B6 FGFRL1-205ENST00000510644 2304 ntAPPRIS P1 TSL 1 (best) BASIC26.11■■□□□ 1.77
TCRBV3S1A0A5B6 LTB4R2-204ENST00000533293 1515 ntAPPRIS P1 TSL 1 (best) BASIC26.1■■□□□ 1.77
TCRBV3S1A0A5B6 EXOC3L4-201ENST00000380069 2293 ntAPPRIS P1 TSL 1 (best) BASIC26.1■■□□□ 1.77
TCRBV3S1A0A5B6 PCYT2-205ENST00000570391 1857 ntTSL 2 BASIC26.1■■□□□ 1.77
TCRBV3S1A0A5B6 FADS3-201ENST00000278829 1779 ntAPPRIS P1 TSL 1 (best) BASIC26.1■■□□□ 1.77
TCRBV3S1A0A5B6 AC120057.4-201ENST00000624722 1615 ntBASIC26.09■■□□□ 1.77
TCRBV3S1A0A5B6 EXOC3-209ENST00000512944 2825 ntAPPRIS P1 TSL 1 (best) BASIC26.08■■□□□ 1.77
TCRBV3S1A0A5B6 MAPK12-201ENST00000215659 1918 ntAPPRIS P1 TSL 1 (best) BASIC26.07■■□□□ 1.76
TCRBV3S1A0A5B6 ARRDC1-201ENST00000371421 1586 ntAPPRIS P1 TSL 1 (best) BASIC26.07■■□□□ 1.76
TCRBV3S1A0A5B6 UCK1-201ENST00000372208 2063 ntTSL 1 (best) BASIC26.07■■□□□ 1.76
TCRBV3S1A0A5B6 TPRA1-202ENST00000355552 1933 ntAPPRIS P1 TSL 1 (best) BASIC26.06■■□□□ 1.76
TCRBV3S1A0A5B6 SHF-206ENST00000560471 2499 ntTSL 5 BASIC26.06■■□□□ 1.76
TCRBV3S1A0A5B6 TNK2-201ENST00000333602 5270 ntAPPRIS P1 TSL 1 (best) BASIC26.06■■□□□ 1.76
TCRBV3S1A0A5B6 AC105285.1-201ENST00000500914 2036 ntTSL 1 (best) BASIC26.05■■□□□ 1.76
TCRBV3S1A0A5B6 ATRNL1-207ENST00000527407 1583 ntTSL 5 BASIC26.05■■□□□ 1.76
TCRBV3S1A0A5B6 CCND3-203ENST00000372991 2085 ntAPPRIS P1 TSL 1 (best) BASIC26.05■■□□□ 1.76
TCRBV3S1A0A5B6 COL13A1-212ENST00000520133 1833 ntTSL 5 BASIC26.03■■□□□ 1.76
TCRBV3S1A0A5B6 CAPNS1-201ENST00000246533 1918 ntAPPRIS P2 TSL 1 (best) BASIC26.01■■□□□ 1.75
TCRBV3S1A0A5B6 BMP7-202ENST00000395864 1746 ntTSL 5 BASIC26.01■■□□□ 1.75
TCRBV3S1A0A5B6 RCC1L-202ENST00000614461 2419 ntTSL 1 (best) BASIC25.99■■□□□ 1.75
TCRBV3S1A0A5B6 INO80B-203ENST00000409917 796 ntTSL 2 BASIC25.99■■□□□ 1.75
TCRBV3S1A0A5B6 TRAPPC10-202ENST00000380221 1763 ntTSL 1 (best) BASIC25.98■■□□□ 1.75
TCRBV3S1A0A5B6 DCBLD1-201ENST00000296955 1979 ntAPPRIS P2 TSL 1 (best) BASIC25.96■■□□□ 1.75
TCRBV3S1A0A5B6 CGREF1-203ENST00000402394 1906 ntAPPRIS P2 TSL 2 BASIC25.96■■□□□ 1.75
TCRBV3S1A0A5B6 ANKRD65-203ENST00000454272 1506 ntAPPRIS P1 TSL 5 BASIC25.96■■□□□ 1.75
TCRBV3S1A0A5B6 MPST-201ENST00000341116 1504 ntAPPRIS P1 TSL 5 BASIC25.95■■□□□ 1.74
TCRBV3S1A0A5B6 HOXD8-201ENST00000313173 1917 ntAPPRIS P3 TSL 2 BASIC25.95■■□□□ 1.74
TCRBV3S1A0A5B6 GALR3-201ENST00000249041 1157 ntAPPRIS P1 TSL 1 (best) BASIC25.95■■□□□ 1.74
TCRBV3S1A0A5B6 JUND-201ENST00000252818 1863 ntAPPRIS P1 BASIC25.94■■□□□ 1.74
TCRBV3S1A0A5B6 GNPTAB-206ENST00000549940 1678 ntTSL 1 (best) BASIC25.93■■□□□ 1.74
TCRBV3S1A0A5B6 FZD2-201ENST00000315323 2112 ntAPPRIS P1 BASIC25.93■■□□□ 1.74
TCRBV3S1A0A5B6 CHCHD4-202ENST00000396914 1405 ntAPPRIS P1 TSL 1 (best) BASIC25.92■■□□□ 1.74
TCRBV3S1A0A5B6 PHOX2A-201ENST00000298231 1699 ntAPPRIS P1 TSL 1 (best) BASIC25.92■■□□□ 1.74
TCRBV3S1A0A5B6 GIPC1-203ENST00000393033 1926 ntAPPRIS P1 TSL 1 (best) BASIC25.91■■□□□ 1.74
TCRBV3S1A0A5B6 AC015813.7-201ENST00000623294 581 ntBASIC25.91■■□□□ 1.74
TCRBV3S1A0A5B6 NFKBIA-209ENST00000557389 1537 ntTSL 2 BASIC25.91■■□□□ 1.74
TCRBV3S1A0A5B6 TPRA1-209ENST00000489960 1903 ntAPPRIS P1 TSL 5 BASIC25.9■■□□□ 1.74
TCRBV3S1A0A5B6 AL357033.3-201ENST00000620143 614 ntTSL 3 BASIC25.9■■□□□ 1.74
TCRBV3S1A0A5B6 HOXB3-207ENST00000472863 1909 ntTSL 2 BASIC25.89■■□□□ 1.74
TCRBV3S1A0A5B6 SLC2A4RG-201ENST00000266077 1731 ntAPPRIS P1 TSL 1 (best) BASIC25.88■■□□□ 1.73
TCRBV3S1A0A5B6 KCTD17-202ENST00000403888 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC25.87■■□□□ 1.73
TCRBV3S1A0A5B6 NEUROG2-201ENST00000313341 2287 ntAPPRIS P1 TSL 1 (best) BASIC25.86■■□□□ 1.73
TCRBV3S1A0A5B6 AL161658.1-201ENST00000623641 1967 ntBASIC25.86■■□□□ 1.73
TCRBV3S1A0A5B6 AC139426.1-201ENST00000568218 2529 ntBASIC25.86■■□□□ 1.73
TCRBV3S1A0A5B6 VWA1-201ENST00000338660 2147 ntTSL 2 BASIC25.84■■□□□ 1.73
TCRBV3S1A0A5B6 COL13A1-210ENST00000517713 2007 ntAPPRIS ALT2 TSL 5 BASIC25.83■■□□□ 1.73
TCRBV3S1A0A5B6 ABHD12-201ENST00000339157 2117 ntAPPRIS P1 TSL 2 BASIC25.82■■□□□ 1.72
TCRBV3S1A0A5B6 HMX1-201ENST00000400677 1895 ntAPPRIS P1 TSL 1 (best) BASIC25.82■■□□□ 1.72
TCRBV3S1A0A5B6 ARPC5L-202ENST00000353214 2507 ntAPPRIS P1 TSL 2 BASIC25.82■■□□□ 1.72
TCRBV3S1A0A5B6 ZIC2-201ENST00000376335 2983 ntAPPRIS P1 TSL 1 (best) BASIC25.81■■□□□ 1.72
TCRBV3S1A0A5B6 CUL4A-202ENST00000375440 2364 ntAPPRIS P1 TSL 1 (best) BASIC25.81■■□□□ 1.72
TCRBV3S1A0A5B6 PQLC1-203ENST00000397778 2555 ntAPPRIS P3 TSL 1 (best) BASIC25.77■■□□□ 1.72
TCRBV3S1A0A5B6 TMEM80-202ENST00000397512 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC25.77■■□□□ 1.72
TCRBV3S1A0A5B6 DEXI-201ENST00000331808 1561 ntAPPRIS P1 TSL 1 (best) BASIC25.76■■□□□ 1.71
TCRBV3S1A0A5B6 CD151-202ENST00000397420 1648 ntAPPRIS P2 TSL 1 (best) BASIC25.75■■□□□ 1.71
TCRBV3S1A0A5B6 TMEM158-201ENST00000503771 1813 ntAPPRIS P1 BASIC25.74■■□□□ 1.71
TCRBV3S1A0A5B6 SECTM1-201ENST00000269389 2235 ntAPPRIS P2 TSL 1 (best) BASIC25.74■■□□□ 1.71
TCRBV3S1A0A5B6 WDSUB1-205ENST00000409990 1920 ntAPPRIS P1 TSL 2 BASIC25.74■■□□□ 1.71
TCRBV3S1A0A5B6 AMN-201ENST00000299155 1907 ntAPPRIS P2 TSL 1 (best) BASIC25.73■■□□□ 1.71
TCRBV3S1A0A5B6 FAM117A-201ENST00000240364 2365 ntAPPRIS P2 TSL 1 (best) BASIC25.73■■□□□ 1.71
TCRBV3S1A0A5B6 GXYLT1-201ENST00000280876 1937 ntAPPRIS ALT2 TSL 1 (best) BASIC25.73■■□□□ 1.71
Retrieved 100 of 98,524 protein–RNA pairs in 44.8 ms