Protein–RNA interactions for Protein: A0A0B4J234

TRAV2, T-cell receptor alpha variable 2 (Fragment), humanhuman

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV2A0A0B4J234 GRK2-204ENST00000526285 1458 ntTSL 5 BASIC20.87■□□□□ 0.93
TRAV2A0A0B4J234 NRTN-201ENST00000303212 1109 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
TRAV2A0A0B4J234 RSG1-201ENST00000375599 1545 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
TRAV2A0A0B4J234 HMGB1-205ENST00000399494 1282 ntAPPRIS P1 TSL 2 BASIC20.85■□□□□ 0.93
TRAV2A0A0B4J234 LINC01578-204ENST00000554894 556 ntTSL 3 BASIC20.85■□□□□ 0.93
TRAV2A0A0B4J234 LINC01578-207ENST00000556895 802 ntTSL 2 BASIC20.85■□□□□ 0.93
TRAV2A0A0B4J234 GRASP-201ENST00000293662 1933 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
TRAV2A0A0B4J234 CATIP-201ENST00000289388 1323 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
TRAV2A0A0B4J234 CMAS-201ENST00000229329 1787 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
TRAV2A0A0B4J234 SNTG2-201ENST00000308624 1888 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
TRAV2A0A0B4J234 ECI1-201ENST00000301729 1541 ntAPPRIS P2 TSL 1 (best) BASIC20.83■□□□□ 0.92
TRAV2A0A0B4J234 CSPG5-205ENST00000610462 2073 ntTSL 5 BASIC20.82■□□□□ 0.92
TRAV2A0A0B4J234 JAG2-201ENST00000331782 5835 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
TRAV2A0A0B4J234 GNPTAB-206ENST00000549940 1678 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
TRAV2A0A0B4J234 NRGN-202ENST00000412681 1106 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
TRAV2A0A0B4J234 PAPD7-201ENST00000230859 5459 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
TRAV2A0A0B4J234 MSX2-202ENST00000507785 1188 ntTSL 2 BASIC20.78■□□□□ 0.92
TRAV2A0A0B4J234 CDK2AP1-203ENST00000535979 1281 ntTSL 3 BASIC20.78■□□□□ 0.92
TRAV2A0A0B4J234 SIAH1-203ENST00000394725 2147 ntAPPRIS P3 TSL 1 (best) BASIC20.78■□□□□ 0.92
TRAV2A0A0B4J234 JUND-201ENST00000252818 1863 ntAPPRIS P1 BASIC20.77■□□□□ 0.92
TRAV2A0A0B4J234 FMR1-219ENST00000621453 1864 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
TRAV2A0A0B4J234 MAPK4-202ENST00000540640 1576 ntTSL 2 BASIC20.76■□□□□ 0.91
TRAV2A0A0B4J234 RNF215-203ENST00000382363 1992 ntAPPRIS P2 TSL 1 (best) BASIC20.76■□□□□ 0.91
TRAV2A0A0B4J234 RASSF7-202ENST00000397583 1928 ntAPPRIS P3 TSL 1 (best) BASIC20.76■□□□□ 0.91
TRAV2A0A0B4J234 AC068152.1-207ENST00000573341 647 ntTSL 2 BASIC20.75■□□□□ 0.91
TRAV2A0A0B4J234 CHCHD4-201ENST00000295767 1603 ntTSL 2 BASIC20.75■□□□□ 0.91
TRAV2A0A0B4J234 PDXP-201ENST00000215904 2010 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
TRAV2A0A0B4J234 AC025431.1-201ENST00000559684 874 ntTSL 3 BASIC20.74■□□□□ 0.91
TRAV2A0A0B4J234 BMP7-202ENST00000395864 1746 ntTSL 5 BASIC20.73■□□□□ 0.91
TRAV2A0A0B4J234 TRAPPC10-202ENST00000380221 1763 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
TRAV2A0A0B4J234 CIC-201ENST00000160740 6111 ntAPPRIS ALT1 TSL 5 BASIC20.7■□□□□ 0.9
TRAV2A0A0B4J234 OLFM2-201ENST00000264833 2019 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
TRAV2A0A0B4J234 CCM2-218ENST00000541586 1719 ntTSL 3 BASIC20.7■□□□□ 0.9
TRAV2A0A0B4J234 ANGPTL6-204ENST00000592641 1781 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
TRAV2A0A0B4J234 MTCP1-202ENST00000369476 2274 ntAPPRIS P1 TSL 3 BASIC20.69■□□□□ 0.9
TRAV2A0A0B4J234 CCM2-201ENST00000258781 1894 ntAPPRIS P3 TSL 1 (best) BASIC20.69■□□□□ 0.9
TRAV2A0A0B4J234 TMEM80-202ENST00000397512 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
TRAV2A0A0B4J234 KLF16-203ENST00000592313 508 ntTSL 3 BASIC20.68■□□□□ 0.9
TRAV2A0A0B4J234 ADNP-AS1-201ENST00000558899 927 ntTSL 3 BASIC20.66■□□□□ 0.9
TRAV2A0A0B4J234 SLC22A23-201ENST00000380298 1574 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
TRAV2A0A0B4J234 CBX4-202ENST00000448310 718 ntAPPRIS ALT2 TSL 3 BASIC20.65■□□□□ 0.9
TRAV2A0A0B4J234 SDCCAG3-204ENST00000371725 2129 ntAPPRIS ALT2 TSL 5 BASIC20.65■□□□□ 0.9
TRAV2A0A0B4J234 DEXI-201ENST00000331808 1561 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
TRAV2A0A0B4J234 AC243773.2-204ENST00000621428 1462 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
TRAV2A0A0B4J234 CTDNEP1-201ENST00000318988 1549 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
TRAV2A0A0B4J234 ANKS1B-202ENST00000333732 1675 ntTSL 2 BASIC20.61■□□□□ 0.89
TRAV2A0A0B4J234 DBP-205ENST00000601104 1489 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
TRAV2A0A0B4J234 RASGEF1C-207ENST00000615330 2268 ntTSL 5 BASIC20.61■□□□□ 0.89
TRAV2A0A0B4J234 AC079305.1-201ENST00000428541 499 ntTSL 3 BASIC20.6■□□□□ 0.89
TRAV2A0A0B4J234 MBD2-201ENST00000256429 5188 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
TRAV2A0A0B4J234 CPNE1-203ENST00000397442 1695 ntTSL 5 BASIC20.58■□□□□ 0.89
TRAV2A0A0B4J234 ATRNL1-209ENST00000609571 1818 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
TRAV2A0A0B4J234 NIT1-201ENST00000368007 1749 ntTSL 2 BASIC20.57■□□□□ 0.88
TRAV2A0A0B4J234 POU3F1-201ENST00000373012 2184 ntAPPRIS P1 BASIC20.56■□□□□ 0.88
TRAV2A0A0B4J234 AC092647.5-201ENST00000426595 1732 ntAPPRIS P1 TSL 5 BASIC20.56■□□□□ 0.88
TRAV2A0A0B4J234 SLC12A2-202ENST00000343225 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
TRAV2A0A0B4J234 AC009133.5-201ENST00000562594 473 ntTSL 4 BASIC20.55■□□□□ 0.88
TRAV2A0A0B4J234 RARRES2P7-201ENST00000567349 469 ntBASIC20.55■□□□□ 0.88
TRAV2A0A0B4J234 AC120057.4-201ENST00000624722 1615 ntBASIC20.54■□□□□ 0.88
TRAV2A0A0B4J234 SLC2A4RG-201ENST00000266077 1731 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
TRAV2A0A0B4J234 UBP1-201ENST00000283628 2074 ntAPPRIS P3 TSL 2 BASIC20.54■□□□□ 0.88
TRAV2A0A0B4J234 CDKN2D-202ENST00000393599 1422 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
TRAV2A0A0B4J234 MSRB2-201ENST00000376510 1803 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
TRAV2A0A0B4J234 BCL7B-201ENST00000223368 1975 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
TRAV2A0A0B4J234 AC008105.3-203ENST00000591365 2238 ntTSL 2 BASIC20.52■□□□□ 0.88
TRAV2A0A0B4J234 TP53I13-201ENST00000301057 1530 ntAPPRIS P2 TSL 1 (best) BASIC20.52■□□□□ 0.87
TRAV2A0A0B4J234 ST7-208ENST00000393451 2110 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
TRAV2A0A0B4J234 AC105285.1-201ENST00000500914 2036 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
TRAV2A0A0B4J234 HOXB3-207ENST00000472863 1909 ntTSL 2 BASIC20.51■□□□□ 0.87
TRAV2A0A0B4J234 FAAP20-204ENST00000400919 1413 ntTSL 3 BASIC20.51■□□□□ 0.87
TRAV2A0A0B4J234 ARL8A-204ENST00000614750 1727 ntTSL 3 BASIC20.5■□□□□ 0.87
TRAV2A0A0B4J234 EMID1-201ENST00000334018 2173 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
TRAV2A0A0B4J234 EMX1-201ENST00000258106 2188 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
TRAV2A0A0B4J234 ATPAF1-201ENST00000329231 1241 ntTSL 2 BASIC20.48■□□□□ 0.87
TRAV2A0A0B4J234 RNF130-201ENST00000261947 1766 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
TRAV2A0A0B4J234 LMNTD2-201ENST00000329451 2084 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
TRAV2A0A0B4J234 AL133380.1-201ENST00000506013 324 ntBASIC20.47■□□□□ 0.87
TRAV2A0A0B4J234 CACNG6-201ENST00000252729 1853 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
TRAV2A0A0B4J234 LFNG-203ENST00000359574 1377 ntAPPRIS ALT1 TSL 1 (best) BASIC20.46■□□□□ 0.87
TRAV2A0A0B4J234 CERS1-201ENST00000429504 2094 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
TRAV2A0A0B4J234 ARHGEF7-206ENST00000375741 5525 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
TRAV2A0A0B4J234 TPRG1L-202ENST00000378344 2414 ntAPPRIS P1 TSL 2 BASIC20.45■□□□□ 0.86
TRAV2A0A0B4J234 NRG3-203ENST00000404547 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
TRAV2A0A0B4J234 SETD8P1-201ENST00000623146 1180 ntBASIC20.44■□□□□ 0.86
TRAV2A0A0B4J234 KHDRBS3-201ENST00000355849 1977 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
TRAV2A0A0B4J234 GATA6-202ENST00000581694 2057 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
TRAV2A0A0B4J234 IL13RA1-201ENST00000371642 1096 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
TRAV2A0A0B4J234 SIGMAR1-205ENST00000477726 840 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
TRAV2A0A0B4J234 CBX4-201ENST00000269397 2664 ntAPPRIS P2 TSL 1 (best) BASIC20.41■□□□□ 0.86
TRAV2A0A0B4J234 SMARCD3-201ENST00000262188 1993 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
TRAV2A0A0B4J234 HOXB3-211ENST00000490677 1109 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
TRAV2A0A0B4J234 TMEM229A-201ENST00000455783 2108 ntAPPRIS P1 BASIC20.41■□□□□ 0.86
TRAV2A0A0B4J234 TUSC1-201ENST00000358022 2052 ntAPPRIS P1 BASIC20.39■□□□□ 0.86
TRAV2A0A0B4J234 LGALS3-201ENST00000254301 1146 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
TRAV2A0A0B4J234 TXN-202ENST00000374517 869 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
TRAV2A0A0B4J234 MAGI2-211ENST00000535697 6146 ntTSL 5 BASIC20.38■□□□□ 0.85
TRAV2A0A0B4J234 AUTS2-202ENST00000403018 957 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
TRAV2A0A0B4J234 CISD3-204ENST00000613478 2074 ntAPPRIS P1 TSL 2 BASIC20.37■□□□□ 0.85
TRAV2A0A0B4J234 CHMP4B-201ENST00000217402 1646 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
TRAV2A0A0B4J234 CGREF1-202ENST00000312734 1610 ntAPPRIS P2 TSL 5 BASIC20.37■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 11.5 ms