Protein–RNA interactions for Protein: A0A0B4J234

TRAV2, T-cell receptor alpha variable 2 (Fragment), humanhuman

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV2A0A0B4J234 FBLL1-201ENST00000338333 1519 ntAPPRIS P1 BASIC25.54■■□□□ 1.68
TRAV2A0A0B4J234 TCF15-201ENST00000246080 1555 ntAPPRIS P1 TSL 1 (best) BASIC25.35■■□□□ 1.65
TRAV2A0A0B4J234 FBRSL1-201ENST00000434748 5568 ntAPPRIS P2 TSL 1 (best) BASIC25.2■■□□□ 1.62
TRAV2A0A0B4J234 AL356512.1-201ENST00000607453 1739 ntBASIC24.91■■□□□ 1.58
TRAV2A0A0B4J234 CSNK1E-204ENST00000403904 1580 ntAPPRIS P1 TSL 5 BASIC24.88■■□□□ 1.57
TRAV2A0A0B4J234 AES-202ENST00000327141 1608 ntAPPRIS P1 TSL 1 (best) BASIC24.74■■□□□ 1.55
TRAV2A0A0B4J234 PPP1CA-203ENST00000376745 1476 ntAPPRIS P1 TSL 1 (best) BASIC24.73■■□□□ 1.55
TRAV2A0A0B4J234 HES6-203ENST00000409160 1600 ntTSL 2 BASIC24.69■■□□□ 1.54
TRAV2A0A0B4J234 SSSCA1-205ENST00000527920 806 ntTSL 3 BASIC24.5■■□□□ 1.51
TRAV2A0A0B4J234 PRR5-217ENST00000617066 1726 ntTSL 5 BASIC24.36■■□□□ 1.49
TRAV2A0A0B4J234 SEPT3-204ENST00000406029 1866 ntTSL 5 BASIC24.26■■□□□ 1.47
TRAV2A0A0B4J234 PHF10-201ENST00000339209 1719 ntAPPRIS P4 TSL 1 (best) BASIC24.24■■□□□ 1.47
TRAV2A0A0B4J234 PRR5-216ENST00000611394 1843 ntTSL 2 BASIC24.19■■□□□ 1.46
TRAV2A0A0B4J234 HRAS-203ENST00000397596 1100 ntAPPRIS P1 TSL 3 BASIC23.95■■□□□ 1.42
TRAV2A0A0B4J234 ZFYVE21-201ENST00000216602 1521 ntAPPRIS ALT2 TSL 2 BASIC23.94■■□□□ 1.42
TRAV2A0A0B4J234 PTF1A-201ENST00000376504 1537 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
TRAV2A0A0B4J234 OLFM1-208ENST00000392991 1057 ntTSL 2 BASIC23.63■■□□□ 1.37
TRAV2A0A0B4J234 NECTIN3-201ENST00000319792 1549 ntAPPRIS ALT2 TSL 1 (best) BASIC23.53■■□□□ 1.36
TRAV2A0A0B4J234 ANKRD60-201ENST00000457363 1038 ntAPPRIS P1 TSL 5 BASIC23.52■■□□□ 1.36
TRAV2A0A0B4J234 MPND-201ENST00000262966 1567 ntAPPRIS P3 TSL 1 (best) BASIC23.48■■□□□ 1.35
TRAV2A0A0B4J234 TAF5L-202ENST00000366674 492 ntTSL 3 BASIC23.47■■□□□ 1.35
TRAV2A0A0B4J234 CAPNS1-206ENST00000588815 1471 ntAPPRIS P2 TSL 1 (best) BASIC23.4■■□□□ 1.34
TRAV2A0A0B4J234 GIPC1-205ENST00000586027 1386 ntAPPRIS P1 TSL 2 BASIC23.4■■□□□ 1.34
TRAV2A0A0B4J234 PPP2CB-204ENST00000518564 691 ntTSL 3 BASIC23.34■■□□□ 1.33
TRAV2A0A0B4J234 AC116565.1-201ENST00000610212 2421 ntAPPRIS P1 BASIC23.34■■□□□ 1.33
TRAV2A0A0B4J234 FAM149A-205ENST00000502970 1990 ntAPPRIS P2 TSL 5 BASIC23.26■■□□□ 1.31
TRAV2A0A0B4J234 CYHR1-209ENST00000530374 1870 ntTSL 3 BASIC23.19■■□□□ 1.3
TRAV2A0A0B4J234 SLC25A28-201ENST00000370495 1451 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
TRAV2A0A0B4J234 NT5DC2-203ENST00000459839 1639 ntTSL 1 (best) BASIC23.12■■□□□ 1.29
TRAV2A0A0B4J234 ZNF358-202ENST00000597229 1954 ntAPPRIS P1 TSL 2 BASIC23.05■■□□□ 1.28
TRAV2A0A0B4J234 MPND-207ENST00000599840 1611 ntAPPRIS ALT2 TSL 5 BASIC23■■□□□ 1.27
TRAV2A0A0B4J234 METRNL-201ENST00000320095 1605 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
TRAV2A0A0B4J234 UBE2M-201ENST00000253023 1508 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
TRAV2A0A0B4J234 CCM2-219ENST00000544363 1620 ntTSL 3 BASIC22.82■■□□□ 1.24
TRAV2A0A0B4J234 GALR3-201ENST00000249041 1157 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
TRAV2A0A0B4J234 RAB12-201ENST00000329286 2137 ntAPPRIS P1 TSL 1 (best) BASIC22.81■■□□□ 1.24
TRAV2A0A0B4J234 CSNK1E-206ENST00000413574 1631 ntTSL 5 BASIC22.79■■□□□ 1.24
TRAV2A0A0B4J234 FAM149A-215ENST00000514153 2070 ntAPPRIS P2 TSL 5 BASIC22.78■■□□□ 1.24
TRAV2A0A0B4J234 TRIP10-202ENST00000313285 2035 ntAPPRIS P1 TSL 1 (best) BASIC22.74■■□□□ 1.23
TRAV2A0A0B4J234 CMTM4-202ENST00000394106 1187 ntAPPRIS P1 TSL 1 (best) BASIC22.73■■□□□ 1.23
TRAV2A0A0B4J234 CMTM4-204ENST00000563952 1023 ntTSL 1 (best) BASIC22.73■■□□□ 1.23
TRAV2A0A0B4J234 INO80B-201ENST00000233331 1261 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
TRAV2A0A0B4J234 NKAIN4-203ENST00000370316 1430 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
TRAV2A0A0B4J234 CACNG8-202ENST00000638874 1278 ntAPPRIS P2 TSL 1 (best) BASIC22.66■■□□□ 1.22
TRAV2A0A0B4J234 CDV3-203ENST00000431519 955 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
TRAV2A0A0B4J234 AL357033.3-201ENST00000620143 614 ntTSL 3 BASIC22.63■■□□□ 1.21
TRAV2A0A0B4J234 TNK2-201ENST00000333602 5270 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
TRAV2A0A0B4J234 FOXD1-202ENST00000615637 2272 ntAPPRIS P1 BASIC22.57■■□□□ 1.2
TRAV2A0A0B4J234 ACOT7-209ENST00000545482 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC22.57■■□□□ 1.2
TRAV2A0A0B4J234 C11orf68-202ENST00000449692 1559 ntAPPRIS P3 TSL 1 (best) BASIC22.56■■□□□ 1.2
TRAV2A0A0B4J234 FAM89B-203ENST00000530349 1263 ntAPPRIS P1 TSL 2 BASIC22.55■■□□□ 1.2
TRAV2A0A0B4J234 PPP2CB-201ENST00000221138 2006 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
TRAV2A0A0B4J234 NT5DC2-202ENST00000422318 1795 ntAPPRIS ALT2 TSL 5 BASIC22.54■■□□□ 1.2
TRAV2A0A0B4J234 INO80B-203ENST00000409917 796 ntTSL 2 BASIC22.49■■□□□ 1.19
TRAV2A0A0B4J234 ILK-212ENST00000532063 1617 ntTSL 2 BASIC22.45■■□□□ 1.18
TRAV2A0A0B4J234 NT5M-207ENST00000616989 1635 ntTSL 1 (best) BASIC22.42■■□□□ 1.18
TRAV2A0A0B4J234 PWWP2B-202ENST00000631148 2013 ntTSL 5 BASIC22.38■■□□□ 1.17
TRAV2A0A0B4J234 AC015813.7-201ENST00000623294 581 ntBASIC22.35■■□□□ 1.17
TRAV2A0A0B4J234 TGIF1-202ENST00000343820 2076 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
TRAV2A0A0B4J234 RAN-202ENST00000392369 1530 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
TRAV2A0A0B4J234 HAPLN2-201ENST00000255039 1771 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
TRAV2A0A0B4J234 SATB1-AS1-216ENST00000598149 1119 ntTSL 2 BASIC22.17■■□□□ 1.14
TRAV2A0A0B4J234 PABPN1-201ENST00000216727 2001 ntAPPRIS P2 TSL 1 (best) BASIC22.14■■□□□ 1.14
TRAV2A0A0B4J234 LIMCH1-211ENST00000509638 1570 ntTSL 1 (best) BASIC22.14■■□□□ 1.13
TRAV2A0A0B4J234 HAGHL-201ENST00000341413 1701 ntTSL 2 BASIC22.14■■□□□ 1.13
TRAV2A0A0B4J234 HOXB3-208ENST00000476342 1420 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
TRAV2A0A0B4J234 MAPK3-201ENST00000263025 1861 ntAPPRIS P3 TSL 1 (best) BASIC22.11■■□□□ 1.13
TRAV2A0A0B4J234 ECHS1-201ENST00000368547 1617 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
TRAV2A0A0B4J234 MAPK3-202ENST00000322266 1743 ntTSL 5 BASIC22.09■■□□□ 1.13
TRAV2A0A0B4J234 AC008738.5-201ENST00000587312 482 ntTSL 3 BASIC22.07■■□□□ 1.12
TRAV2A0A0B4J234 AL136373.1-201ENST00000634804 1449 ntAPPRIS P1 BASIC22.06■■□□□ 1.12
TRAV2A0A0B4J234 C11orf84-201ENST00000294244 2024 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
TRAV2A0A0B4J234 LMO2-202ENST00000395833 1687 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
TRAV2A0A0B4J234 ALYREF-202ENST00000505490 1088 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
TRAV2A0A0B4J234 INO80B-WBP1-202ENST00000452361 2040 ntAPPRIS P5 TSL 2 BASIC22.03■■□□□ 1.12
TRAV2A0A0B4J234 FEZF2-203ENST00000486811 2001 ntAPPRIS P1 TSL 5 BASIC22.01■■□□□ 1.11
TRAV2A0A0B4J234 AC006077.2-201ENST00000623591 457 ntBASIC21.99■■□□□ 1.11
TRAV2A0A0B4J234 CRIP2-201ENST00000329146 1857 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
TRAV2A0A0B4J234 C11orf63-202ENST00000307257 1964 ntTSL 2 BASIC21.95■■□□□ 1.1
TRAV2A0A0B4J234 Z97634.1-201ENST00000412293 1715 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
TRAV2A0A0B4J234 CHCHD4-202ENST00000396914 1405 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
TRAV2A0A0B4J234 CYBA-201ENST00000261623 797 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
TRAV2A0A0B4J234 FAM89B-202ENST00000449319 1337 ntTSL 1 (best) BASIC21.89■■□□□ 1.1
TRAV2A0A0B4J234 KHSRP-213ENST00000619396 2226 ntAPPRIS ALT2 TSL 5 BASIC21.87■■□□□ 1.09
TRAV2A0A0B4J234 DRD4-201ENST00000176183 1375 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
TRAV2A0A0B4J234 CTDNEP1-208ENST00000573600 1724 ntAPPRIS P1 TSL 5 BASIC21.85■■□□□ 1.09
TRAV2A0A0B4J234 ZNRF2P1-201ENST00000441407 443 ntBASIC21.84■■□□□ 1.09
TRAV2A0A0B4J234 B4GALT2-203ENST00000372324 2203 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
TRAV2A0A0B4J234 FAM19A5-203ENST00000402357 1508 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
TRAV2A0A0B4J234 AC145285.7-201ENST00000614819 1539 ntBASIC21.8■■□□□ 1.08
TRAV2A0A0B4J234 NT5M-201ENST00000389022 1617 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
TRAV2A0A0B4J234 PRELID2-202ENST00000394450 1102 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
TRAV2A0A0B4J234 AGAP1-204ENST00000409457 2165 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
TRAV2A0A0B4J234 RAB43-207ENST00000476465 1627 ntTSL 3 BASIC21.75■■□□□ 1.07
TRAV2A0A0B4J234 TPRG1L-201ENST00000344579 2189 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
TRAV2A0A0B4J234 ANKRD65-203ENST00000454272 1506 ntAPPRIS P1 TSL 5 BASIC21.72■■□□□ 1.07
TRAV2A0A0B4J234 SYNGR1-202ENST00000318801 1361 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
TRAV2A0A0B4J234 SLC25A10-203ENST00000545862 1911 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
TRAV2A0A0B4J234 AGTRAP-204ENST00000376637 1067 ntTSL 2 BASIC21.67■■□□□ 1.06
TRAV2A0A0B4J234 GRASP-206ENST00000552049 1688 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
Retrieved 100 of 98,524 protein–RNA pairs in 12.9 ms