Protein–RNA interactions for Protein: P33552

CKS2, Cyclin-dependent kinases regulatory subunit 2, humanhuman

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CKS2P33552 SSSCA1-205ENST00000527920 806 ntTSL 3 BASIC21.23■□□□□ 0.99
CKS2P33552 KCNF1-201ENST00000295082 2289 ntAPPRIS P1 BASIC21.23■□□□□ 0.99
CKS2P33552 SIAH1-203ENST00000394725 2147 ntAPPRIS P3 TSL 1 (best) BASIC21.22■□□□□ 0.99
CKS2P33552 ZBTB10-204ENST00000455036 5458 ntAPPRIS P3 TSL 2 BASIC21.22■□□□□ 0.99
CKS2P33552 CSPG5-205ENST00000610462 2073 ntTSL 5 BASIC21.22■□□□□ 0.99
CKS2P33552 SPIRE1-202ENST00000409402 5665 ntAPPRIS ALT2 TSL 1 (best) BASIC21.22■□□□□ 0.99
CKS2P33552 GRASP-201ENST00000293662 1933 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
CKS2P33552 KIAA2013-202ENST00000376576 2539 ntTSL 2 BASIC21.19■□□□□ 0.98
CKS2P33552 ADGRB2-204ENST00000398542 5176 ntTSL 5 BASIC21.18■□□□□ 0.98
CKS2P33552 C11orf68-201ENST00000438576 1619 ntAPPRIS ALT2 TSL 2 BASIC21.18■□□□□ 0.98
CKS2P33552 LFNG-201ENST00000222725 2377 ntAPPRIS P4 TSL 5 BASIC21.17■□□□□ 0.98
CKS2P33552 FAM149A-201ENST00000227065 2708 ntAPPRIS P2 TSL 1 (best) BASIC21.16■□□□□ 0.98
CKS2P33552 MPND-201ENST00000262966 1567 ntAPPRIS P3 TSL 1 (best) BASIC21.16■□□□□ 0.98
CKS2P33552 FOXG1-201ENST00000313071 4890 ntAPPRIS P1 BASIC21.16■□□□□ 0.98
CKS2P33552 CERS2-201ENST00000271688 2544 ntAPPRIS P1 TSL 5 BASIC21.15■□□□□ 0.98
CKS2P33552 UBE2M-201ENST00000253023 1508 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
CKS2P33552 GGA1-204ENST00000381756 2107 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
CKS2P33552 DPP6-204ENST00000406326 2012 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
CKS2P33552 ACTG1-210ENST00000575842 2256 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
CKS2P33552 CERS1-201ENST00000429504 2094 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
CKS2P33552 MAGI2-211ENST00000535697 6146 ntTSL 5 BASIC21.1■□□□□ 0.97
CKS2P33552 FEZF2-203ENST00000486811 2001 ntAPPRIS P1 TSL 5 BASIC21.09■□□□□ 0.97
CKS2P33552 PDXP-201ENST00000215904 2010 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
CKS2P33552 SH3BP2-221ENST00000511747 2351 ntAPPRIS P3 TSL 1 (best) BASIC21.06■□□□□ 0.96
CKS2P33552 OLFM1-208ENST00000392991 1057 ntTSL 2 BASIC21.06■□□□□ 0.96
CKS2P33552 EMX1-201ENST00000258106 2188 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
CKS2P33552 ADRA2C-201ENST00000330055 2129 ntAPPRIS P1 BASIC21.02■□□□□ 0.96
CKS2P33552 EMID1-201ENST00000334018 2173 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
CKS2P33552 CTDNEP1-210ENST00000574322 1708 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
CKS2P33552 TUSC1-201ENST00000358022 2052 ntAPPRIS P1 BASIC20.98■□□□□ 0.95
CKS2P33552 TAZ-215ENST00000612460 1793 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
CKS2P33552 ECHS1-201ENST00000368547 1617 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
CKS2P33552 ARMC10-211ENST00000541300 2266 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
CKS2P33552 CISD3-204ENST00000613478 2074 ntAPPRIS P1 TSL 2 BASIC20.95■□□□□ 0.94
CKS2P33552 AC145285.7-201ENST00000614819 1539 ntBASIC20.95■□□□□ 0.94
CKS2P33552 MAF-201ENST00000326043 2646 ntAPPRIS P3 TSL 1 (best) BASIC20.94■□□□□ 0.94
CKS2P33552 MTCP1-202ENST00000369476 2274 ntAPPRIS P1 TSL 3 BASIC20.94■□□□□ 0.94
CKS2P33552 PRKAR1B-201ENST00000360274 2007 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
CKS2P33552 CSNK1E-206ENST00000413574 1631 ntTSL 5 BASIC20.91■□□□□ 0.94
CKS2P33552 DPF1-204ENST00000416611 2341 ntTSL 5 BASIC20.9■□□□□ 0.94
CKS2P33552 SFRP5-201ENST00000266066 1836 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
CKS2P33552 PCSK6-201ENST00000331826 2309 ntTSL 5 BASIC20.87■□□□□ 0.93
CKS2P33552 GNAI2-202ENST00000313601 2464 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
CKS2P33552 CBLN1-201ENST00000219197 2435 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
CKS2P33552 NKAIN4-203ENST00000370316 1430 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
CKS2P33552 ZBTB7A-202ENST00000601588 2083 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
CKS2P33552 LRRC10B-201ENST00000378075 2219 ntAPPRIS P1 BASIC20.84■□□□□ 0.93
CKS2P33552 OLFM2-201ENST00000264833 2019 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
CKS2P33552 SNX24-201ENST00000261369 2158 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
CKS2P33552 GNPTAB-201ENST00000299314 5701 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
CKS2P33552 RAMP2-AS1-202ENST00000589716 1985 ntTSL 5 BASIC20.81■□□□□ 0.92
CKS2P33552 RASSF7-202ENST00000397583 1928 ntAPPRIS P3 TSL 1 (best) BASIC20.81■□□□□ 0.92
CKS2P33552 KCNK1-202ENST00000366621 2161 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
CKS2P33552 GLT8D1-201ENST00000266014 1849 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
CKS2P33552 AKR1E2-201ENST00000298375 1566 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
CKS2P33552 TRIOBP-205ENST00000407319 2125 ntAPPRIS P3 TSL 1 (best) BASIC20.8■□□□□ 0.92
CKS2P33552 SCARA3-202ENST00000337221 1910 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
CKS2P33552 NRXN1-228ENST00000628364 2444 ntTSL 5 BASIC20.78■□□□□ 0.92
CKS2P33552 MAGI2-215ENST00000628980 6212 ntTSL 5 BASIC20.77■□□□□ 0.92
CKS2P33552 TAF5L-202ENST00000366674 492 ntTSL 3 BASIC20.77■□□□□ 0.92
CKS2P33552 AC092647.5-201ENST00000426595 1732 ntAPPRIS P1 TSL 5 BASIC20.76■□□□□ 0.91
CKS2P33552 MAFA-201ENST00000333480 2347 ntAPPRIS P1 BASIC20.76■□□□□ 0.91
CKS2P33552 LMNTD2-201ENST00000329451 2084 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
CKS2P33552 Z97634.1-201ENST00000412293 1715 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
CKS2P33552 IL1R1-201ENST00000409288 1735 ntTSL 5 BASIC20.75■□□□□ 0.91
CKS2P33552 FOXD3-201ENST00000371116 2086 ntAPPRIS P1 BASIC20.67■□□□□ 0.9
CKS2P33552 E2F4-201ENST00000379378 2096 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CKS2P33552 CCZ1-201ENST00000325974 1802 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
CKS2P33552 SPIRE1-203ENST00000410092 5533 ntAPPRIS P3 TSL 1 (best) BASIC20.64■□□□□ 0.89
CKS2P33552 ARTN-202ENST00000372359 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
CKS2P33552 KCTD17-201ENST00000402077 1691 ntAPPRIS P3 TSL 1 (best) BASIC20.63■□□□□ 0.89
CKS2P33552 SHC2-201ENST00000264554 2494 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
CKS2P33552 LMTK3-202ENST00000600059 5113 ntAPPRIS ALT2 TSL 2 BASIC20.63■□□□□ 0.89
CKS2P33552 NT5M-201ENST00000389022 1617 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CKS2P33552 FMR1-219ENST00000621453 1864 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
CKS2P33552 B4GALT7-201ENST00000029410 1747 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
CKS2P33552 NT5M-207ENST00000616989 1635 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
CKS2P33552 BCL3-201ENST00000164227 2038 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
CKS2P33552 HRAS-203ENST00000397596 1100 ntAPPRIS P1 TSL 3 BASIC20.6■□□□□ 0.89
CKS2P33552 ANKRD60-201ENST00000457363 1038 ntAPPRIS P1 TSL 5 BASIC20.59■□□□□ 0.89
CKS2P33552 ACOT7-201ENST00000361521 2429 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
CKS2P33552 TWIST1-201ENST00000242261 1666 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
CKS2P33552 HECA-201ENST00000367658 5614 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
CKS2P33552 CCM2-201ENST00000258781 1894 ntAPPRIS P3 TSL 1 (best) BASIC20.58■□□□□ 0.88
CKS2P33552 PXDC1-202ENST00000380283 2190 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
CKS2P33552 PI4KAP2-202ENST00000450651 2294 ntTSL 5 BASIC20.56■□□□□ 0.88
CKS2P33552 DPY19L1-209ENST00000638088 5075 ntAPPRIS ALT2 TSL 5 BASIC20.56■□□□□ 0.88
CKS2P33552 SNTG2-201ENST00000308624 1888 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
CKS2P33552 ESRRA-201ENST00000000442 2215 ntAPPRIS P3 TSL 1 (best) BASIC20.55■□□□□ 0.88
CKS2P33552 PHF23-201ENST00000320316 2037 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
CKS2P33552 RAN-202ENST00000392369 1530 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
CKS2P33552 KCNK3-202ENST00000620977 1956 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
CKS2P33552 RAPGEF1-203ENST00000372195 6256 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
CKS2P33552 AGAP3-211ENST00000473312 2039 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
CKS2P33552 RDX-206ENST00000528900 1814 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
CKS2P33552 C11orf68-202ENST00000449692 1559 ntAPPRIS P3 TSL 1 (best) BASIC20.51■□□□□ 0.87
CKS2P33552 ATRNL1-209ENST00000609571 1818 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
CKS2P33552 TMEM268-201ENST00000288502 2314 ntAPPRIS P3 TSL 1 (best) BASIC20.5■□□□□ 0.87
CKS2P33552 RASGEF1C-207ENST00000615330 2268 ntTSL 5 BASIC20.5■□□□□ 0.87
CKS2P33552 ZFPM1-201ENST00000319555 5380 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 23.7 ms